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PMID: 8413298 Published · ppublish English Comparative Study Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

urbs1, a gene regulating siderophore biosynthesis in Ustilago maydis, encodes a protein similar to the erythroid transcription factor GATA-1.

Molecular and cellular biology ·Vol. 13 ·No. 11 ·1993-11-00 ·Pages 7091-100

Voisard C, Wang J, McEvoy JL, Xu P, Leong SA

Abstract

Ustilago maydis secretes ferrichrome-type siderophores, ferric-ion-binding compounds, in response to iron starvation. TA2701, a non-enterobactin-producing, non-ferrichrome-utilizing mutant of Salmonella typhimurium LT-2, was employed as a biological indicator in a novel screening method to isolate three N-methyl-N'-nitro-N-nitrosoguanidine-induced U. maydis mutants defective in the regulation of ferrichrome-type siderophore biosynthesis. These mutants displayed a constitutive phenotype; they produced siderophores in the presence of iron concentrations that would typically repress siderophore synthesis in wild-type strains. A 4.8-kb fragment of U. maydis genomic DNA capable of restoring normal regulation of siderophore biosynthesis in the constitutive mutants was identified. This segment of DNA contains an intronless open reading frame that specifies a protein of 950 amino acids containing two finger motifs similar to those found in the erythroid transcription factor GATA-1. Disruption of this open reading frame in a wild-type strain gave rise to cells that produced siderophores constitutively. Genetic studies indicated that the disruption mutation was allelic to the chemically induced mutations, confirming that the structural gene for a regulator rather than a suppressor gene had been cloned. Northern (RNA) analysis of the gene revealed a 4.2-kb transcript that is expressed constitutively at low levels in wild-type cells. The data support the hypothesis that this gene, which we designate urbs1 (Ustilago regulator of biosynthesis of siderophores), acts directly or indirectly to repress biosynthesis of siderophores in U. maydis.

Related Genes
MeSH Terms
Amino Acid Sequence Base Sequence Cloning, Molecular Crosses, Genetic DNA, Fungal/metabolism DNA-Binding Proteins/genetics Erythroid-Specific DNA-Binding Factors Escherichia coli/genetics Fungal Proteins/biosynthesis,genetics Genes, Fungal Genes, Regulator Methylnitronitrosoguanidine/pharmacology Molecular Sequence Data Mutagenesis Open Reading Frames RNA, Messenger/metabolism Restriction Mapping Salmonella typhimurium/drug effects Sequence Homology, Amino Acid Siderophores/biosynthesis,isolation & purification,pharmacology Transcription Factors/biosynthesis,genetics Ustilago/drug effects,genetics,metabolism Zinc Fingers/genetics
Chemicals
DNA, Fungal DNA-Binding Proteins Erythroid-Specific DNA-Binding Factors Fungal Proteins RNA, Messenger Siderophores Transcription Factors urbs1 protein, Ustilago maydis Methylnitronitrosoguanidine
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Voisard C
Plant Disease Resistance Research Unit, U.S. Department of Agriculture, Madison, Wisconsin.
Wang J
McEvoy J L
Xu P
Leong S A
References (41)
41 references, click to expand
  1. New services of the EMBL Data Library.
    Nucleic Acids Res. 1990 Aug 11;18(15):4319-23 PMID: 2388823
  2. A small single-"finger" peptide from the erythroid transcription factor GATA-1 binds specifically to DNA as a zinc or iron complex.
    Proc Natl Acad Sci U S A. 1993 Mar 1;90(5):1676-80 PMID: 8446581
  3. Isolation and characterization of a Ustilago maydis glyceraldehyde-3-phosphate dehydrogenase-encoding gene.
    Gene. 1990 Sep 1;93(1):111-7 PMID: 2227419
  4. A simple procedure for maximum yield of high-quality plasmid DNA.
    Biotechniques. 1990 Dec;9(6):676-9 PMID: 2271166
  5. Preparation of high molecular weight RNA.
    Methods Enzymol. 1991;194:398-405 PMID: 1706459
  6. A rapid method for the purification of deprotected oligodeoxynucleotides.
    Nucleic Acids Res. 1991 Feb 11;19(3):674 PMID: 2011537
  7. Structure and promoter activity of the gene for the erythroid transcription factor GATA-1.
    Proc Natl Acad Sci U S A. 1991 Apr 15;88(8):3004-8 PMID: 2014222
  8. Engineered metal-binding proteins: purification to protein folding.
    Science. 1991 Jun 28;252(5014):1796-7 PMID: 1648261
  9. Saturation mutagenesis of the UASNTR (GATAA) responsible for nitrogen catabolite repression-sensitive transcriptional activation of the allantoin pathway genes in Saccharomyces cerevisiae.
    J Bacteriol. 1991 Aug;173(16):4977-82 PMID: 1860815
  10. Structural dynamics and functional domains of the fur protein.
    Biochemistry. 1991 Aug 20;30(33):8201-10 PMID: 1868094
  11. Expression of the DAL80 gene, whose product is homologous to the GATA factors and is a negative regulator of multiple nitrogen catabolic genes in Saccharomyces cerevisiae, is sensitive to nitrogen catabolite repression.
    Mol Cell Biol. 1991 Dec;11(12):6205-15 PMID: 1944286
  12. Compatibility reactions on solid medium and interstrain inhibition in Ustilago maydis.
    Genetics. 1968 Nov;60(3):461-74 PMID: 5731752
  13. Rhodotorulic acid from species of Leucosporidium, Rhodosporidium, Rhodotorula, Sporidiobolus, and Sporobolomyces, and a new alanine-containing ferrichrome from Cryptococcus melibiosum.
    J Bacteriol. 1970 Sep;103(3):722-33 PMID: 5529038
  14. Solution conformation of ferrichrome, a microbial iron transport cyclohexapeptide, as deduced by high resolution proton magnetic resonance.
    J Mol Biol. 1970 Sep 28;52(3):399-414 PMID: 5492288
  15. Iron uptake in Salmonella typhimurium: utilization of exogenous siderochromes as iron carriers.
    J Bacteriol. 1972 Sep;111(3):731-8 PMID: 4559824
  16. RNA from the yeast transposable element Ty1 has both ends in the direct repeats, a structure similar to retrovirus RNA.
    Proc Natl Acad Sci U S A. 1983 May;80(9):2432-6 PMID: 6189122
  17. A comprehensive set of sequence analysis programs for the VAX.
    Nucleic Acids Res. 1984 Jan 11;12(1 Pt 1):387-95 PMID: 6546423
  18. Oxygen toxicity, oxygen radicals, transition metals and disease.
    Biochem J. 1984 Apr 1;219(1):1-14 PMID: 6326753
  19. Nucleotide sequence of the iron regulatory gene fur.
    Mol Gen Genet. 1985;200(1):110-3 PMID: 2993806
  20. Expression of the caudal gene in the germ line of Drosophila: formation of an RNA and protein gradient during early embryogenesis.
    Cell. 1987 Feb 13;48(3):465-78 PMID: 2433048
  21. Gene transfer system for the phytopathogenic fungus Ustilago maydis.
    Proc Natl Acad Sci U S A. 1988 Feb;85(3):865-9 PMID: 2829206
  22. Molecular mechanism of regulation of siderophore-mediated iron assimilation.
    Microbiol Rev. 1987 Dec;51(4):509-18 PMID: 2963952
  23. Improved tools for biological sequence comparison.
    Proc Natl Acad Sci U S A. 1988 Apr;85(8):2444-8 PMID: 3162770
  24. The yeast ADR6 gene encodes homopolymeric amino acid sequences and a potential metal-binding domain.
    Nucleic Acids Res. 1988 Nov 11;16(21):10153-69 PMID: 3143101
  25. Rapid production of full-length cDNAs from rare transcripts: amplification using a single gene-specific oligonucleotide primer.
    Proc Natl Acad Sci U S A. 1988 Dec;85(23):8998-9002 PMID: 2461560
  26. Amino acid sequence and domain structure of entactin. Homology with epidermal growth factor precursor and low density lipoprotein receptor.
    J Cell Biol. 1988 Dec;107(6 Pt 2):2749-56 PMID: 3264556
  27. Isolation and characterization of an autonomously replicating sequence from Ustilago maydis.
    Mol Cell Biol. 1988 Sep;8(9):3703-9 PMID: 2851726
  28. Analysis of ferrichrome biosynthesis in the phytopathogenic fungus Ustilago maydis: cloning of an ornithine-N5-oxygenase gene.
    J Bacteriol. 1989 May;171(5):2811-8 PMID: 2523381
  29. Cloning of cDNA for the major DNA-binding protein of the erythroid lineage through expression in mammalian cells.
    Nature. 1989 Jun 8;339(6224):446-51 PMID: 2725678
  30. SPXX, a frequent sequence motif in gene regulatory proteins.
    J Mol Biol. 1989 May 5;207(1):61-84 PMID: 2500531
  31. Mutation in a heat-regulated hsp70 gene of Ustilago maydis.
    EMBO J. 1989 Jul;8(7):1927-34 PMID: 2792075
  32. Characterization of siderophores from Ustilago maydis.
    Mycopathologia. 1989 Nov;108(2):125-33 PMID: 2531844
  33. Structure and evolution of a human erythroid transcription factor.
    Nature. 1990 Jan 4;343(6253):92-6 PMID: 2104960
  34. Cloning and structural characterization of porcine heart aconitase.
    J Biol Chem. 1990 Feb 15;265(5):2814-21 PMID: 2303429
  35. Use of a chemically modified T7 DNA polymerase for manual and automated sequencing of supercoiled DNA.
    Biotechniques. 1988 May;6(5):460-9 PMID: 3273407
  36. The regulatory gene areA mediating nitrogen metabolite repression in Aspergillus nidulans. Mutations affecting specificity of gene activation alter a loop residue of a putative zinc finger.
    EMBO J. 1990 May;9(5):1355-64 PMID: 1970293
  37. nit-2, the major positive-acting nitrogen regulatory gene of Neurospora crassa, encodes a sequence-specific DNA-binding protein.
    Proc Natl Acad Sci U S A. 1990 Jul;87(14):5331-5 PMID: 2142530
  38. Sequence and expression of GLN3, a positive nitrogen regulatory gene of Saccharomyces cerevisiae encoding a protein with a putative zinc finger DNA-binding domain.
    Mol Cell Biol. 1991 Dec;11(12):6216-28 PMID: 1682800
  39. Cloning, restriction digestion and DNA labeling of large DNA fragments (greater than or equal to 1 kb) in the presence of remelted SeaPlaque GTG agarose gels.
    Biotechniques. 1991 Dec;11(6):784-6, 788, 790-1 PMID: 1809336
  40. sid1, a gene initiating siderophore biosynthesis in Ustilago maydis: molecular characterization, regulation by iron, and role in phytopathogenicity.
    Proc Natl Acad Sci U S A. 1993 Feb 1;90(3):903-7 PMID: 8430103
  41. The b mating-type locus of Ustilago maydis contains variable and constant regions.
    Genes Dev. 1990 Aug;4(8):1384-95 PMID: 2227416
Article Info
Journal
Molecular and cellular biology
Abbr.
Mol Cell Biol
ISSN
0270-7306
Published
1993-11-00
Pages
7091-100
Language
English
Region
United States
NLM ID
8109087
PMCID
PMC364770
Subset
IM
Grants
NIGMS NIH HHS · GM33716 · United States
Databases
GENBANK
M80547
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