Home LiteratureArticle Details
PMID: 6954511 Published · ppublish English Comparative Study Journal Article Research Support, Non-U.S. Gov't

Complete amino acid sequence of an HLA-DR antigen-like beta chain as predicted from the nucleotide sequence: similarities with immunoglobulins and HLA-A, -B, and -C antigens.

Larhammar D, Schenning L, Gustafsson K, Wiman K, Claesson L, Rask L, Peterson PA

Abstract

The complete nucleotide sequence of an HLA-DR antigen-like beta-chain cDNA clone was determined. The 1,080 base pairs include the complete coding region and most of the untranslated portion. The predicted amino acid sequence has 229 residues. The beta chain contains two immunoglobulin-like disulfide loops and a 21-amino acid residue membrane-integrated segment. Ten amino acid residues reside on the cytoplasmic side of the plasma membrane. The single asparagine-linked carbohydrate moiety is attached to asparagine-19. The NH2-terminal 91 residues of the beta chain are homologous to the corresponding region of HLA-A, -B, and -C antigen heavy chains. Residues 92-192 of the beta chain display statistically significant homology to members of the immunoglobulin family, beta 2-microglobulin, and the immunoglobulin-like domain of HLA-A, -B, and -C antigen heavy chains. These data establish that the major histocompatibility antigens of class I and class II type and the constant regions of immunoglobulins are evolutionarily related.

MeSH Terms
Amino Acid Sequence Base Sequence HLA Antigens HLA-DR Antigens Histocompatibility Antigens Class II/genetics Humans Immunoglobulins/genetics Macromolecular Substances Membrane Proteins RNA, Messenger/genetics
Chemicals
HLA Antigens HLA-DR Antigens Histocompatibility Antigens Class II Immunoglobulins Macromolecular Substances Membrane Proteins RNA, Messenger
Authors & Affiliations
7 authors, click to expand affiliations / ORCID
Larhammar D
Schenning L
Gustafsson K
Wiman K
Claesson L
Rask L
Peterson P A
References (45)
45 references, click to expand
  1. Isolation and identification of a cDNA clone corresponding to an HLA-DR antigen beta chain.
    Proc Natl Acad Sci U S A. 1982 Mar;79(6):1703-7 PMID: 6952222
  2. An improved method of testing for evolutionary homology.
    J Mol Biol. 1966 Mar;16(1):9-16 PMID: 5917736
  3. A general method applicable to the search for similarities in the amino acid sequence of two proteins.
    J Mol Biol. 1970 Mar;48(3):443-53 PMID: 5420325
  4. The covalent structure of a human gamma G-immunoglobulin. XI. Functional implications.
    Biochemistry. 1970 Aug 4;9(16):3197-205 PMID: 5489773
  5. 2 -Microglobulin--a free immunoglobulin domain.
    Proc Natl Acad Sci U S A. 1972 Jul;69(7):1697-701 PMID: 4558655
  6. Cell interactions between histoincompatible T and B lymphocytes. IV. Involvement of the immune response (Ir) gene in the control of lymphocyte interactions in responses controlled by the gene.
    J Exp Med. 1973 Sep 1;138(3):734-9 PMID: 4542255
  7. Function of macrophages in antigen recognition by guinea pig T lymphocytes. II. Role of the macrophage in the regulation of genetic control of the immune response.
    J Exp Med. 1973 Nov 1;138(5):1213-29 PMID: 4126770
  8. The complete amino acid sequence of beta 2-microglobulin.
    Biochemistry. 1973 Nov 20;12(24):4811-22 PMID: 4586824
  9. Evolutionary relationship between immunoglobulins and transplantation antigens.
    Proc Natl Acad Sci U S A. 1975 Apr;72(4):1612-6 PMID: 1055432
  10. Structural and serological properties of murine Ia alloantigens.
    Transplant Rev. 1976;30:236-70 PMID: 59974
  11. Structure and function of the constant regions of immunoglobulins.
    Q Rev Biophys. 1976 May;9(2):135-80 PMID: 785525
  12. A simple method for DNA restriction site mapping.
    Nucleic Acids Res. 1976 Sep;3(9):2387-98 PMID: 787937
  13. Chemical properties of human Ia antigens.
    Nature. 1977 Jan 20;265(5591):248-51 PMID: 834269
  14. beta2-microglobulin and the major histocompatibility complex.
    Adv Cancer Res. 1977;24:115-63 PMID: 66860
  15. H-2 restriction of suppressor T-cell induction by hapten-modified lymphoid cells in tolerance to 1-fluoro-2,4-dinitrobenzene contact sensitization.
    J Exp Med. 1977 Apr 1;145(4):1071-6 PMID: 300774
  16. Orientation of cell-surface antigens in the lipid bilayer of lymphocyte plasma membrane.
    Nature. 1977 Sep 22;269(5626):307-11 PMID: 904685
  17. Insertion of a rabbit beta-globin gene sequence into an E. coli plasmid.
    Nucleic Acids Res. 1975 Dec;2(12):2365-78 PMID: 802513
  18. The protein products of the murine 17th chromosome: genetics and structure.
    Adv Immunol. 1978;26:147-93 PMID: 99995
  19. Amino acid sequence homology between HLA-A,B,C antigens, beta2-microglobulin and immunoglobulins.
    Scand J Immunol. 1978;8(6):563-8 PMID: 366737
  20. The major histocompatibility complex of the mouse.
    Science. 1979 Feb 9;203(4380):516-21 PMID: 104386
  21. A method for sequencing restriction fragments with dideoxynucleoside triphosphates.
    Nucleic Acids Res. 1978 Dec;5(12):4537-45 PMID: 745989
  22. T lymphocyte stimulation by hapten-conjugated macrophages: a model system for the study of immunocompetent cell interactions.
    Immunol Rev. 1978;40:181-204 PMID: 381166
  23. The heavy chain of human histocompatibility antigen HLA-B7 contains an immunoglobulin-like region.
    Nature. 1979 Nov 15;282(5736):266-70 PMID: 388231
  24. Structural similarities between Thy-1 antigen from rat brain and immunoglobulin.
    Nature. 1979 Nov 15;282(5736):341-2 PMID: 503212
  25. Comparison of amino acid sequences of two human histocompatibility antigens, HLA-A2 and HLA-B7: location of putative alloantigenic sites.
    Proc Natl Acad Sci U S A. 1979 Sep;76(9):4395-9 PMID: 92029
  26. Complete amino acid sequence of a papain-solubilized human histocompatibility antigen, HLA-B7. 2. Sequence determination and search for homologies.
    Biochemistry. 1979 Dec 11;18(25):5711-20 PMID: 518865
  27. Amino acid sequence of an immunoglobulin-like HLA antigen heavy chain domain.
    Proc Natl Acad Sci U S A. 1979 Nov;76(11):5839-42 PMID: 118453
  28. Both chains of HLA-DR bind to the membrane with a penultimate hydrophobic region and the heavy chain is phosphorylated at its hydrophilic carboxyl terminus.
    Proc Natl Acad Sci U S A. 1979 Dec;76(12):6304-8 PMID: 293722
  29. Complete amino acid sequence of pooled papain-solubilized HLA-A, -B, and -C antigens: relatedness to immunoglobulins and internal homologies.
    Proc Natl Acad Sci U S A. 1980 Feb;77(2):1129-33 PMID: 6928663
  30. Sequencing end-labeled DNA with base-specific chemical cleavages.
    Methods Enzymol. 1980;65(1):499-560 PMID: 6246368
  31. Cloning and sequence analysis of cDNAs encoding two distinct somatostatin precursors found in the endocrine pancreas of anglerfish.
    Nature. 1980 Nov 13;288(5787):137-41 PMID: 6107860
  32. Molecular cloning of a human histocompatibility antigen cDNA fragment.
    Proc Natl Acad Sci U S A. 1980 Oct;77(10):6081-5 PMID: 6934534
  33. Primary structure of a murine transplantation antigen.
    Nature. 1981 May 7;291(5810):35-9 PMID: 7231522
  34. Three cDNA clones encoding mouse transplantation antigens: homology to immunoglobulin genes.
    Cell. 1981 Apr;24(1):125-34 PMID: 6786753
  35. Major histocompatibility antigens: the human (HLA-A, -B, -C) and murine (H-2K, H-2D) class I molecules.
    Cell. 1981 May;24(2):287-99 PMID: 7016338
  36. Isolation and partial nucleotide sequence of a cDNA clone for human histocompatibility antigen HLA-B by use of an oligodeoxynucleotide primer.
    Proc Natl Acad Sci U S A. 1981 Jan;78(1):616-20 PMID: 6165999
  37. Sugar residues on proteins.
    CRC Crit Rev Biochem. 1981;10(4):307-77 PMID: 6265145
  38. cDNA clone coding for part of a mouse H-2d major histocompatibility antigen.
    Proc Natl Acad Sci U S A. 1981 May;78(5):2772-6 PMID: 6265910
  39. Primary structural: analysis of the transplantation antigens of the murine H-2 major histocompatibility complex.
    Annu Rev Biochem. 1981;50:1025-52 PMID: 7023355
  40. Structure of C-terminal half of two H-2 antigens from cloned mRNA.
    Nature. 1981 Jul 2;292(5818):78-81 PMID: 6895103
  41. Distinct forms of both alpha and beta subunits are present in the human Ia molecular pool.
    Proc Natl Acad Sci U S A. 1981 Jul;78(7):4549-51 PMID: 6945597
  42. Human B-cell alloantigens DC1, MT1, and LB12 are identical to each other but distinct from the HLA-DR antigen.
    Proc Natl Acad Sci U S A. 1981 Jul;78(7):4566-70 PMID: 6974868
  43. Cloning and sequence of cDNA coding for alpha 1-antitrypsin.
    Proc Natl Acad Sci U S A. 1981 Nov;78(11):6826-30 PMID: 7031661
  44. [Primary structure of class II human histocompatibility antigens. 1st communication. Amino acid sequence of the N-terminal 198 residues of the beta chain of a HLA-Dw2,2;DR2,2-alloantigen (author's transl)].
    Hoppe Seylers Z Physiol Chem. 1981 Dec;362(12):1665-9 PMID: 6947956
  45. cDNA clones coding for the heavy chain of human HLA-DR antigen.
    Proc Natl Acad Sci U S A. 1982 Jan;79(2):545-9 PMID: 6952207
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1982-06-00
Pages
3687-91
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC346491
Subset
IM
Databases
GENBANK
J00198
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com