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PMID: 3181133 Published · ppublish English Journal Article Research Support, U.S. Gov't, Non-P.H.S.

Two proteins crosslinked to RNA containing the adenovirus L3 poly(A) site require the AAUAAA sequence for binding.

The EMBO journal ·Vol. 7 ·No. 10 ·1988-10-00 ·Pages 3159-69

Moore CL, Chen J, Whoriskey J

Abstract

The major proteins crosslinked by UV light to RNA containing the adenovirus-2 L3 poly(A) site are species of 155, 68 and 38 kd mol. wt (p155, p68 and p38). Mutation of AAUAAA to AAGAAA prevented cross-linking of the two larger proteins and destroyed the ability of the RNA to compete for binding of these proteins. However, association of p155 and p68 with precursor was unaffected by deletion of sequences downstream of the poly(A) site critical for in vitro polyadenylation. These two proteins are in the polyadenylation-specific, but not the nonspecific complexes detected by electrophoresis in nondenaturing gels. In addition, p155 and p68 are not found on RNA which has been processed. p155 bound a 15-nt oligomer containing AAUAAA, and thus does not require extended RNA sequence for interaction with RNA. Identified by immunoprecipitation with specific antibody, p38 is the C protein of heterogeneous ribonucleoprotein particles (hmRNPs). While p155 has an Sm epitope, it is not associated with snRNPs containing trimethylated guanosine caps.

MeSH Terms
Adenosine Triphosphate/metabolism Adenoviruses, Human/genetics Autoantibodies/immunology Cell-Free System Cross-Linking Reagents HeLa Cells Kinetics Molecular Weight Nuclear Proteins/metabolism Nucleic Acid Precursors/metabolism Poly A/genetics Precipitin Tests RNA Processing, Post-Transcriptional RNA, Messenger/metabolism Regulatory Sequences, Nucleic Acid Ribonucleoproteins/immunology,metabolism
Chemicals
Autoantibodies Cross-Linking Reagents Nuclear Proteins Nucleic Acid Precursors RNA, Messenger Ribonucleoproteins Poly A Adenosine Triphosphate
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Moore C L
Department of Molecular Biology and Microbiology, Tufts University School of Medicine, Boston, MA 02111.
Chen J
Whoriskey J
References (58)
58 references, click to expand
  1. Proteins associated with poly(A) and other regions of mRNA and hnRNA molecules as investigated by crosslinking.
    Cell. 1981 Jun;24(3):775-83 PMID: 7249081
  2. Use of staphylococcal protein A as an immunological reagent.
    J Immunol Methods. 1978;20:241-53 PMID: 349081
  3. Isolation and characterization of rabbit anti-m3 2,2,7G antibodies.
    Nucleic Acids Res. 1982 Nov 25;10(22):7103-13 PMID: 7155893
  4. Structure of nuclear ribonucleoprotein: heterogeneous nuclear RNA is complexed with a major sextet of proteins in vivo.
    Proc Natl Acad Sci U S A. 1983 Mar;80(6):1599-602 PMID: 6572923
  5. Polyadenylic acid addition sites in the adenovirus type 2 major late transcription unit.
    J Virol. 1983 Oct;48(1):127-34 PMID: 6136617
  6. Splicing of messenger RNA precursors is inhibited by antisera to small nuclear ribonucleoprotein.
    Cell. 1983 Nov;35(1):101-7 PMID: 6194895
  7. Are U4 small nuclear ribonucleoproteins involved in polyadenylation?
    Nature. 1984 May 10-16;309(5964):179-82 PMID: 6325940
  8. Characterization of heterogeneous nuclear RNA-protein complexes in vivo with monoclonal antibodies.
    Mol Cell Biol. 1984 Jun;4(6):1104-14 PMID: 6204191
  9. Recognition of cap structure in splicing in vitro of mRNA precursors.
    Cell. 1984 Oct;38(3):731-6 PMID: 6567484
  10. RNA sequence containing hexanucleotide AAUAAA directs efficient mRNA polyadenylation in vitro.
    Mol Cell Biol. 1985 Feb;5(2):373-9 PMID: 2579321
  11. Transcription termination and 3' processing: the end is in site!
    Cell. 1985 Jun;41(2):349-59 PMID: 2580642
  12. The consensus sequence YGTGTTYY located downstream from the AATAAA signal is required for efficient formation of mRNA 3' termini.
    Nucleic Acids Res. 1985 Feb 25;13(4):1347-68 PMID: 2987822
  13. Accurate cleavage and polyadenylation of exogenous RNA substrate.
    Cell. 1985 Jul;41(3):845-55 PMID: 2408761
  14. Poly(A) site cleavage in a HeLa nuclear extract is dependent on downstream sequences.
    Cell. 1985 Dec;43(3 Pt 2):677-83 PMID: 2866847
  15. Heterogeneous nuclear ribonucleoproteins: role in RNA splicing.
    Science. 1986 Mar 28;231(4745):1534-9 PMID: 3952495
  16. A small nuclear ribonucleoprotein associates with the AAUAAA polyadenylation signal in vitro.
    Cell. 1986 May 23;45(4):581-91 PMID: 2423249
  17. A single gene from yeast for both nuclear and cytoplasmic polyadenylate-binding proteins: domain structure and expression.
    Cell. 1986 Jun 20;45(6):827-35 PMID: 3518950
  18. Definition of essential sequences and functional equivalence of elements downstream of the adenovirus E2A and the early simian virus 40 polyadenylation sites.
    Mol Cell Biol. 1985 Nov;5(11):2975-83 PMID: 3018490
  19. Photochemical cross-linking of cap binding proteins to eucaryotic mRNAs: effect of mRNA 5' secondary structure.
    Mol Cell Biol. 1985 Nov;5(11):3222-30 PMID: 3837842
  20. A compensatory base change in U1 snRNA suppresses a 5' splice site mutation.
    Cell. 1986 Sep 12;46(6):827-35 PMID: 3757028
  21. Analysis of RNA cleavage at the adenovirus-2 L3 polyadenylation site.
    EMBO J. 1986 Aug;5(8):1929-38 PMID: 3019671
  22. Compensatory mutations suggest that base-pairing with a small nuclear RNA is required to form the 3' end of H3 messenger RNA.
    Nature. 1986 Oct 30-Nov 5;323(6091):777-81 PMID: 3022153
  23. A protein that specifically recognizes the 3' splice site of mammalian pre-mRNA introns is associated with a small nuclear ribonucleoprotein.
    Cell. 1986 Dec 5;47(5):755-66 PMID: 2946417
  24. A protein associated with small nuclear ribonucleoprotein particles recognizes the 3' splice site of premessenger RNA.
    Cell. 1986 Dec 26;47(6):973-84 PMID: 2946421
  25. The AAUAAA sequence is required both for cleavage and for polyadenylation of simian virus 40 pre-mRNA in vitro.
    Mol Cell Biol. 1986 Jul;6(7):2317-23 PMID: 3023928
  26. mRNA polyadenylate-binding protein: gene isolation and sequencing and identification of a ribonucleoprotein consensus sequence.
    Mol Cell Biol. 1986 Aug;6(8):2932-43 PMID: 3537727
  27. In vitro cleavage of the simian virus 40 early polyadenylation site adjacent to a required downstream TG sequence.
    Mol Cell Biol. 1986 Dec;6(12):4734-41 PMID: 3025668
  28. Structure and function of nuclear and cytoplasmic ribonucleoprotein particles.
    Annu Rev Cell Biol. 1986;2:459-98 PMID: 3548774
  29. Requirements for accurate and efficient mRNA 3' end cleavage and polyadenylation of a simian virus 40 early pre-RNA in vitro.
    Mol Cell Biol. 1987 Jan;7(1):495-503 PMID: 3031477
  30. Recognition of the TACTAAC box during mRNA splicing in yeast involves base pairing to the U2-like snRNA.
    Cell. 1987 Apr 24;49(2):229-39 PMID: 3552247
  31. Position-dependent sequence elements downstream of AAUAAA are required for efficient rabbit beta-globin mRNA 3' end formation.
    Cell. 1987 May 8;49(3):399-406 PMID: 3568131
  32. Formation of mRNA 3' termini: stability and dissociation of a complex involving the AAUAAA sequence.
    EMBO J. 1987 Jan;6(1):177-86 PMID: 2438129
  33. Identification of nuclear cap specific proteins in HeLa cells.
    Nucleic Acids Res. 1987 Aug 25;15(16):6489-500 PMID: 3627995
  34. Identification of a complex associated with processing and polyadenylation in vitro of herpes simplex virus type 1 thymidine kinase precursor RNA.
    Mol Cell Biol. 1987 Sep;7(9):3277-86 PMID: 2823124
  35. A poly(A) addition site and a downstream termination region are required for efficient cessation of transcription by RNA polymerase II in the mouse beta maj-globin gene.
    Proc Natl Acad Sci U S A. 1987 Dec;84(23):8306-10 PMID: 3479794
  36. Identification of the human U7 snRNP as one of several factors involved in the 3' end maturation of histone premessenger RNA's.
    Science. 1987 Dec 18;238(4834):1682-7 PMID: 2825355
  37. Sedimentation analysis of polyadenylation-specific complexes.
    Mol Cell Biol. 1988 Jan;8(1):226-33 PMID: 2961980
  38. In vitro assembly of U1 snRNPs.
    EMBO J. 1987 Nov;6(11):3479-85 PMID: 2962858
  39. Electrophoretic separation of polyadenylation-specific complexes.
    Genes Dev. 1987 Sep;1(7):672-82 PMID: 3428596
  40. A 64 kd nuclear protein binds to RNA segments that include the AAUAAA polyadenylation motif.
    Cell. 1988 Jan 29;52(2):221-8 PMID: 2830023
  41. Separation and characterization of a poly(A) polymerase and a cleavage/specificity factor required for pre-mRNA polyadenylation.
    Cell. 1988 Mar 11;52(5):731-42 PMID: 2830992
  42. Cleavage and polyadenylation of messenger RNA precursors in vitro occurs within large and specific 3' processing complexes.
    EMBO J. 1987 Dec 20;6(13):4159-68 PMID: 3127203
  43. Analysis of mRNA 3' end formation by modification interference: the only modifications which prevent processing lie in AAUAAA and the poly(A) site.
    EMBO J. 1987 Dec 20;6(13):4177-84 PMID: 3443104
  44. Specific pre-cleavage and post-cleavage complexes involved in the formation of SV40 late mRNA 3' termini in vitro.
    EMBO J. 1987 Dec 20;6(13):4185-92 PMID: 2832155
  45. A functionally redundant downstream sequence in SV40 late pre-mRNA is required for mRNA 3'-end formation and for assembly of a precleavage complex in vitro.
    J Biol Chem. 1988 Apr 25;263(12):5780-8 PMID: 2833517
  46. Set of novel, conserved proteins fold pre-messenger RNA into ribonucleosomes.
    Proteins. 1986 Nov;1(3):195-210 PMID: 3329728
  47. Mutations in poly(A) site downstream elements affect in vitro cleavage activity.
    Mol Cell Biol. 1988 Apr;8(4):1839-41 PMID: 2837659
  48. Assembly of a polyadenylation-specific 25S ribonucleoprotein complex in vitro.
    Mol Cell Biol. 1988 May;8(5):2052-62 PMID: 2898729
  49. Cleavage of structural proteins during the assembly of the head of bacteriophage T4.
    Nature. 1970 Aug 15;227(5259):680-5 PMID: 5432063
  50. Photo-induced joining of a transfer RNA with its cognate aminoacyl-transfer RNA synthetase.
    J Mol Biol. 1974 Apr 25;84(4):503-13 PMID: 4840999
  51. Assay of picomole amounts of ATP, ADP, and AMP using the luciferase enzyme system.
    Anal Biochem. 1975 Nov;69(1):187-206 PMID: 2029
  52. Specific cross-linking of proteins S7 and L4 to ribosomal RNA, by UV irradiation of Escherichia coli ribosomal subunits.
    Mol Gen Genet. 1975 Dec 9;141(4):343-55 PMID: 814400
  53. Studies on the environment of protein S7 within the 30-S subunit Escherichia coli ribosomes.
    Eur J Biochem. 1976 Apr 15;64(1):77-89 PMID: 776616
  54. The genome-associated, specific RNA binding proteins of avian and mammalian type C viruses.
    Cell. 1977 Jan;10(1):91-9 PMID: 189935
  55. Peptide mapping by limited proteolysis in sodium dodecyl sulfate and analysis by gel electrophoresis.
    J Biol Chem. 1977 Feb 10;252(3):1102-6 PMID: 320200
  56. Identification and characterization of the packaging proteins of core 40S hnRNP particles.
    Cell. 1977 May;11(1):127-38 PMID: 872217
  57. Characterization of the regions from E. coli 16 S RNA covalently linked to ribosomal proteins S4 and S20 after ultraviolet irradiation.
    FEBS Lett. 1977 Jun 15;78(2):261-6 PMID: 885249
  58. Monoclonal antibodies to nucleic acid-containing cellular constituents: probes for molecular biology and autoimmune disease.
    Proc Natl Acad Sci U S A. 1981 May;78(5):2737-41 PMID: 6789322
Article Info
Journal
The EMBO journal
Abbr.
EMBO J
ISSN
0261-4189
Published
1988-10-00
Pages
3159-69
Language
English
Region
England
NLM ID
8208664
PMCID
PMC454706
Subset
IM
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