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PMID: 6136617 Published · ppublish English Journal Article

Polyadenylic acid addition sites in the adenovirus type 2 major late transcription unit.

Journal of virology ·Vol. 48 ·No. 1 ·1983-10-00 ·Pages 127-34

Le Moullec JM, Akusjärvi G, Stålhandske P, Pettersson U, Chambraud B, Gilardi P, Nasri M, Perricaudet M

Abstract

The cytoplasmic mRNAs which are transcribed from the major late adenovirus promoter can be arranged into five 3'-coterminal families, L1 to L5. We have defined the polyadenylation sites of the mRNAs that belong to the five families at the nucleotide level. From the results, the following conclusions can be made. (i) The hexanucleotide sequence AAUAAA is present at the 3' end of all late adenovirus type 2 mRNAs and precedes the site of polyadenylation by 12 to 30 nucleotides. (ii) Between one and three A residues are present in the genomic sequence at the polyadenylation site. (iii) A sequence with the composition (T)n (A)p (T)q (n, p, q greater than or equal to 1) is found 4 to 24 nucleotides beyond all the adenovirus-specific polyadenylation sites except the 3'-coterminal family L4. This sequence is also found beyond many cellular polyadenylation sites. (iv) The L1 and L2 polyadenylation sites are very similar in structure. The other polyadenylation sites show no apparent sequence relationship, except for the hexanucleotide sequence.

MeSH Terms
Adenoviruses, Human/genetics,metabolism Base Sequence Cloning, Molecular Poly A/metabolism RNA, Messenger/metabolism RNA, Viral/genetics,metabolism Transcription, Genetic
Chemicals
RNA, Messenger RNA, Viral Poly A
Authors & Affiliations
8 authors, click to expand affiliations / ORCID
Le Moullec J M
Akusjärvi G
Stålhandske P
Pettersson U
Chambraud B
Gilardi P
Nasri M
Perricaudet M
References (47)
47 references, click to expand
  1. Structure of two adenovirus type 12 transforming polypeptides and their evolutionary implications.
    Nature. 1980 Nov 13;288(5787):174-6 PMID: 7432516
  2. Structure of a family of rat amylase genes.
    Nature. 1980 Sep 11;287(5778):117-22 PMID: 6159531
  3. Predicted structure of two adenovirus tumor antigens.
    Proc Natl Acad Sci U S A. 1980 Jul;77(7):3778-82 PMID: 6253988
  4. DNA replication and the early to late transition in adenovirus infection.
    Cell. 1980 Nov;22(2 Pt 2):523-33 PMID: 7448872
  5. Multiple mRNA species for the precursor to an adenovirus-encoded glycoprotein: identification and structure of the signal sequence.
    Proc Natl Acad Sci U S A. 1980 Nov;77(11):6349-53 PMID: 6985478
  6. Transcripts from the adenovirus-2 major late promoter yield a single early family of 3' coterminal mRNAs and five late families.
    Cell. 1980 Dec;22(3):905-16 PMID: 7460018
  7. Identification of the gene and mRNA for the adenovirus terminal protein precursor.
    Cell. 1981 Feb;23(2):497-508 PMID: 7471210
  8. Regulation of adenovirus-2 gene expression at the level of transcriptional termination and RNA processing.
    Nature. 1981 Mar 12;290(5802):113-8 PMID: 7207591
  9. The sequence of the 3' non-coding region of the hexon mRNA discloses a novel adenovirus gene.
    Nucleic Acids Res. 1981 Jan 10;9(1):1-17 PMID: 6259616
  10. The nucleotide sequence of the transforming early region E1 of adenovirus type 5 DNA.
    Gene. 1980 Nov;11(3-4):299-309 PMID: 6260576
  11. Skeletal muscle actin mRNA. Characterization of the 3' untranslated region.
    Nucleic Acids Res. 1981 Feb 11;9(3):579-89 PMID: 6894330
  12. Nucleotide sequence of the EcoRI E fragment of adenovirus 2 genome.
    Nucleic Acids Res. 1981 Mar 11;9(5):1229-40 PMID: 6262722
  13. The sequence 5'-AAUAAA-3'forms parts of the recognition site for polyadenylation of late SV40 mRNAs.
    Cell. 1981 Apr;24(1):251-60 PMID: 6113054
  14. Gene and mRNA for precursor polypeptide VI from adenovirus type 2.
    J Virol. 1981 May;38(2):469-82 PMID: 6985479
  15. Controls of RNA splicing and termination in the major late adenovirus transcription unit.
    Nature. 1981 Jul 30;292(5822):420-6 PMID: 7254339
  16. Nucleotide sequence of adenovirus 2 DNA fragment encoding for the carboxylic region of the fiber protein and the entire E4 region.
    Nucleic Acids Res. 1981 Aug 25;9(16):4023-42 PMID: 6985482
  17. Nucleotide sequence of the transforming early region E1b of adenovirus type 12 DNA: structure and gene organization, and comparison with those of adenovirus type 5 DNA.
    Nucleic Acids Res. 1981 Dec 11;9(23):6571-89 PMID: 6275367
  18. Nuclear RNA is spliced in the absence of poly(A) addition.
    Cell. 1981 Oct;26(1 Pt 1):39-46 PMID: 6976837
  19. The 2.2 kb E1b mRNA of human Ad12 and Ad5 codes for two tumor antigens starting at different AUG triplets.
    Cell. 1981 Nov;27(1 Pt 2):121-31 PMID: 7326748
  20. Regulation of adenovirus gene expression.
    Curr Top Microbiol Immunol. 1982;97:157-203 PMID: 7035073
  21. Different mRNAs from the transforming region of highly oncogenic and non-oncogenic human adenoviruses.
    Nature. 1982 Feb 25;295(5851):705-7 PMID: 7057929
  22. Poly(A) sites of adenovirus serotype 2 transcription units.
    J Mol Biol. 1982 Mar 5;155(3):207-33 PMID: 6176714
  23. Newly formed mRNA lacking polyadenylic acid enters the cytoplasm and the polyribosomes but has a shorter half-life in the absence of polyadenylic acid.
    Mol Cell Biol. 1982 May;2(5):517-25 PMID: 6981059
  24. Nucleotide sequences from the adenovirus-2 genome.
    J Biol Chem. 1982 Nov 25;257(22):13475-91 PMID: 7142161
  25. The sequence of 3'-termini of mRNAs from early region III of adenovirus 2.
    Gene. 1982 Oct;19(3):297-301 PMID: 6897541
  26. Structure of three spliced mRNAs from region E3 of adenovirus type 2.
    Gene. 1983 May-Jun;22(2-3):157-65 PMID: 6307816
  27. Colony hybridization: a method for the isolation of cloned DNAs that contain a specific gene.
    Proc Natl Acad Sci U S A. 1975 Oct;72(10):3961-5 PMID: 1105573
  28. 3' non-coding region sequences in eukaryotic messenger RNA.
    Nature. 1976 Sep 16;263(5574):211-4 PMID: 822353
  29. Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I.
    J Mol Biol. 1977 Jun 15;113(1):237-51 PMID: 881736
  30. Spliced segments at the 5' terminus of adenovirus 2 late mRNA.
    Proc Natl Acad Sci U S A. 1977 Aug;74(8):3171-5 PMID: 269380
  31. Groups of adenovirus type 2 mRNA's derived from a large primary transcript: probable nuclear origin and possible common 3' ends.
    J Virol. 1978 Mar;25(3):811-23 PMID: 642075
  32. Cloning and sequence analysis of cDNAs encoding two distinct somatostatin precursors found in the endocrine pancreas of anglerfish.
    Nature. 1980 Nov 13;288(5787):137-41 PMID: 6107860
  33. Coincidence of the promoter and capped 5' terminus of RNA from the adenovirus 2 major late transcription unit.
    Cell. 1978 Dec;15(4):1463-75 PMID: 729003
  34. The nucleotide sequence of the transforming HpaI-E fragment of adenovirus type 5 DNA.
    Gene. 1978 Dec;4(4):309-28 PMID: 744489
  35. The nucleotide sequence of the transforming HindIII-G fragment of adenovirus type 5 DNA. The region between map positions 4.5 (HpaI site) and 8.0 (HindIII site).
    Gene. 1979 May;6(1):75-90 PMID: 478299
  36. Structure of late adenovirus 2 heterogeneous nuclear RNA.
    J Mol Biol. 1979 Apr 25;129(4):547-65 PMID: 480350
  37. The major late adenovirus type-2 transcription unit: termination is downstream from the last poly(A) site.
    J Mol Biol. 1979 Apr 25;129(4):643-56 PMID: 480353
  38. The ovalbumin gene-sequence of putative control regions.
    Nucleic Acids Res. 1980 Jan 11;8(1):127-42 PMID: 6243777
  39. Sequence analysis of adenovirus DNA. IV. The genomic sequences encoding the common tripartite leader of late adenovirus messenger RNA.
    J Mol Biol. 1979 Oct 15;134(1):143-58 PMID: 318166
  40. Complex splicing patterns of RNAs from the early regions of adenovirus-2.
    J Mol Biol. 1979 Oct 25;134(2):265-303 PMID: 537065
  41. The gene for polypeptide IX of adenovirus type 2 and its unspliced messenger RNA.
    Cell. 1980 Mar;19(3):671-81 PMID: 6985473
  42. The structure of adenovirus 2 early nuclear and cytoplasmic RNAs.
    J Mol Biol. 1980 Feb 15;137(1):23-48 PMID: 7365795
  43. Sequencing end-labeled DNA with base-specific chemical cleavages.
    Methods Enzymol. 1980;65(1):499-560 PMID: 6246368
  44. The nucleotide sequence of adenovirus type 5 early region E1: the region between map positions 8.0 (HindIII site) and 11.8 (SmaI site).
    Gene. 1980 Jun;10(1):27-38 PMID: 6250944
  45. Construction of restriction enzyme fragment libraries containing DNA from human adenovirus types 2 and 5.
    Gene. 1980 Jun;10(1):47-52 PMID: 6250946
  46. Structure and gene organization in the transformed Hind III-G fragment of Ad12.
    Cell. 1980 Jul;20(3):777-86 PMID: 6251973
  47. Nucleotide sequence of the EcoRI D fragment of adenovirus 2 genome.
    Nucleic Acids Res. 1980 May 24;8(10):2173-92 PMID: 6253880
Article Info
Journal
Journal of virology
Abbr.
J Virol
ISSN
0022-538X
Published
1983-10-00
Pages
127-34
Language
English
Region
United States
NLM ID
0113724
PMCID
PMC255329
Subset
IM
Databases
GENBANK
J01917, J01918, J01919, J01920, J01921, J01922, J01923, J01924, J01925, J01926, J01927, J01928, J01929, J01930, J01931, J01932, J01933, J01934, J01935, J01936, J01937, J01938, J01939, J01940, J01941, J01942, J01943, J01944, J01945, J01946
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