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PMID: 2962858 Published · ppublish English Journal Article

In vitro assembly of U1 snRNPs.

The EMBO journal ·Vol. 6 ·No. 11 ·1987-11-00 ·Pages 3479-85

Hamm J, Kazmaier M, Mattaj IW

Abstract

An efficient system for the in vitro assembly of U1 snRNPs is described. RNA-protein interactions in a series of U1 snRNA mutants assembled both in vivo and in vitro were studied in order to verify the accuracy of the system. Two discrete protein binding sites are defined by immunoprecipitation with antibodies against different protein components of the U1 snRNP and a newly developed protein sequestering assay. The U1 snRNP-specific proteins 70K and A require only the 5'-most stem-loop structure of U1 snRNA for binding, the common U snRNP proteins require the conserved Sm binding site (AUnG). Interactions between these two groups of proteins are detected. These results are combined to derive a model of the U1 snRNP structure. The potential use of the in vitro system in the functional analysis of U1 snRNP proteins is discussed.

MeSH Terms
Animals Chromosome Deletion Female Genes Mutation Nucleic Acid Conformation Oocytes/metabolism Ribonucleoproteins/genetics Ribonucleoproteins, Small Nuclear Templates, Genetic Transcription, Genetic Xenopus laevis
Chemicals
Ribonucleoproteins Ribonucleoproteins, Small Nuclear
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Hamm J
European Molecular Biology Laboratory, Heidelberg, FRG.
Kazmaier M
Mattaj I W
References (34)
34 references, click to expand
  1. Short-lived, small RNAs in the cytoplasm of HeLa cells.
    Cell. 1974 Sep;3(1):11-4 PMID: 4415761
  2. Interactions between small nuclear ribonucleoprotein particles in formation of spliceosomes.
    Cell. 1987 Jun 19;49(6):763-74 PMID: 2953438
  3. Site-specific cleavage by T1 RNase of U-1 RNA in u-1 ribonucleoprotein particles.
    Proc Natl Acad Sci U S A. 1981 Mar;78(3):1562-6 PMID: 6165013
  4. Monoclonal antibodies to nucleic acid-containing cellular constituents: probes for molecular biology and autoimmune disease.
    Proc Natl Acad Sci U S A. 1981 May;78(5):2737-41 PMID: 6789322
  5. Anti-RNP monoclonal antibodies derived from a mouse strain with lupus-like autoimmunity.
    J Immunol. 1982 Mar;128(3):1176-80 PMID: 6173424
  6. Intracellular transport of microinjected 5S and small nuclear RNAs.
    Nature. 1982 Feb 18;295(5850):572-7 PMID: 6173771
  7. SnRNAs, SnRNPs, and RNA processing.
    Annu Rev Biochem. 1982;51:617-54 PMID: 6180681
  8. Nucleocytoplasmic distribution of snRNPs and stockpiled snRNA-binding proteins during oogenesis and early development in Xenopus laevis.
    Cell. 1983 Feb;32(2):425-34 PMID: 6186395
  9. Protein binding sites are conserved in U1 small nuclear RNA from insects and mammals.
    Proc Natl Acad Sci U S A. 1983 Mar;80(5):1217-20 PMID: 6187007
  10. Structural organization of ribonucleoproteins containing small nuclear RNAs from HeLa cells. Proteins interact closely with a similar structural domain of U1, U2, U4 and U5 small nuclear RNAs.
    J Mol Biol. 1982 Dec 15;162(3):623-43 PMID: 6187926
  11. The U1 small nuclear RNA-protein complex selectively binds a 5' splice site in vitro.
    Cell. 1983 Jun;33(2):509-18 PMID: 6190573
  12. Complete nucleotide sequence of bacteriophage T7 DNA and the locations of T7 genetic elements.
    J Mol Biol. 1983 Jun 5;166(4):477-535 PMID: 6864790
  13. Synthesis and assembly of human small nuclear ribonucleoproteins generated by cell-free translation.
    Proc Natl Acad Sci U S A. 1983 Oct;80(20):6356-60 PMID: 6226047
  14. The leader RNA of vesicular stomatitis virus is bound by a cellular protein reactive with anti-La lupus antibodies.
    Cell. 1983 Oct;34(3):837-45 PMID: 6313210
  15. Purification of snRNPs U1, U2, U4, U5 and U6 with 2,2,7-trimethylguanosine-specific antibody and definition of their constituent proteins reacting with anti-Sm and anti-(U1)RNP antisera.
    EMBO J. 1983;2(7):1129-35 PMID: 6194992
  16. Transcription of class III genes: formation of preinitiation complexes.
    Science. 1983 Nov 18;222(4625):740-8 PMID: 6356356
  17. Genetic analysis of the processing of a spliced tRNA.
    EMBO J. 1982;1(2):263-8 PMID: 6926726
  18. U2 RNA shares a structural domain with U1, U4, and U5 RNAs.
    EMBO J. 1982;1(10):1259-65 PMID: 6202507
  19. Xenopus laevis U1 snRNA genes: characterisation of transcriptionally active genes reveals major and minor repeated gene families.
    EMBO J. 1984 May;3(5):1075-81 PMID: 6203742
  20. The 5' terminus of the RNA moiety of U1 small nuclear ribonucleoprotein particles is required for the splicing of messenger RNA precursors.
    Cell. 1984 Aug;38(1):299-307 PMID: 6235919
  21. Small nuclear U-ribonucleoproteins in Xenopus laevis development. Uncoupled accumulation of the protein and RNA components.
    J Mol Biol. 1984 Sep 15;178(2):273-85 PMID: 6208365
  22. The gapped duplex DNA approach to oligonucleotide-directed mutation construction.
    Nucleic Acids Res. 1984 Dec 21;12(24):9441-56 PMID: 6096830
  23. Nuclear segregation of U2 snRNA requires binding of specific snRNP proteins.
    Cell. 1985 Jan;40(1):111-8 PMID: 2578319
  24. Autoantibodies to ribonucleoprotein particles containing U2 small nuclear RNA.
    EMBO J. 1985 Jun;4(6):1545-50 PMID: 2411542
  25. Small nuclear ribonucleoprotein particle assembly in vivo: demonstration of a 6S RNA-free core precursor and posttranslational modification.
    Cell. 1985 Oct;42(3):751-8 PMID: 2932224
  26. cDNA cloning of a human autoimmune nuclear ribonucleoprotein antigen.
    Proc Natl Acad Sci U S A. 1985 Dec;82(23):7914-8 PMID: 2999783
  27. Monospecific antibodies reveal details of U2 snRNP structure and interaction between U1 and U2 snRNPs.
    EMBO J. 1986 May;5(5):997-1002 PMID: 2941274
  28. A compensatory base change in U1 snRNA suppresses a 5' splice site mutation.
    Cell. 1986 Sep 12;46(6):827-35 PMID: 3757028
  29. Cap trimethylation of U snRNA is cytoplasmic and dependent on U snRNP protein binding.
    Cell. 1986 Sep 12;46(6):905-11 PMID: 2944599
  30. Splicing of messenger RNA precursors.
    Science. 1987 Feb 13;235(4790):766-71 PMID: 3544217
  31. Cloning of the human cDNA for the U1 RNA-associated 70K protein.
    EMBO J. 1986 Dec 1;5(12):3209-17 PMID: 3028775
  32. The role of small nuclear ribonucleoprotein particles in pre-mRNA splicing.
    Nature. 1987 Feb 19-25;325(6106):673-8 PMID: 2950324
  33. Rapid inhibition of processing and assembly of small nuclear ribonucleoproteins after infection with vesicular stomatitis virus.
    Mol Cell Biol. 1987 Mar;7(3):1148-55 PMID: 3031484
  34. DNA-dependent transcription of adenovirus genes in a soluble whole-cell extract.
    Proc Natl Acad Sci U S A. 1980 Jul;77(7):3855-9 PMID: 6933441
Article Info
Journal
The EMBO journal
Abbr.
EMBO J
ISSN
0261-4189
Published
1987-11-00
Pages
3479-85
Language
English
Region
England
NLM ID
8208664
PMCID
PMC553806
Subset
IM
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