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PMID: 24932547 Published · epublish English Journal Article

Active-state model of a dopamine D2 receptor-Gαi complex stabilized by aripiprazole-type partial agonists.

PloS one ·Vol. 9 ·No. 6 ·2014-00-00 ·Pages e100069

Kling RC, Tschammer N, Lanig H, Clark T, Gmeiner P

Abstract

Partial agonists exhibit a submaximal capacity to enhance the coupling of one receptor to an intracellular binding partner. Although a multitude of studies have reported different ligand-specific conformations for a given receptor, little is known about the mechanism by which different receptor conformations are connected to the capacity to activate the coupling to G-proteins. We have now performed molecular-dynamics simulations employing our recently described active-state homology model of the dopamine D2 receptor-Gαi protein-complex coupled to the partial agonists aripiprazole and FAUC350, in order to understand the structural determinants of partial agonism better. We have compared our findings with our model of the D2R-Gαi-complex in the presence of the full agonist dopamine. The two partial agonists are capable of inducing different conformations of important structural motifs, including the extracellular loop regions, the binding pocket and, in particular, intracellular G-protein-binding domains. As G-protein-coupling to certain intracellular epitopes of the receptor is considered the key step of allosterically triggered nucleotide-exchange, it is tempting to assume that impaired coupling between the receptor and the G-protein caused by distinct ligand-specific conformations is a major determinant of partial agonist efficacy.

MeSH Terms
Antipsychotic Agents/pharmacology Aripiprazole Dopamine/metabolism GTP-Binding Protein alpha Subunits, Gi-Go/chemistry,metabolism Humans Ligands Molecular Dynamics Simulation Piperazines/pharmacology Protein Binding Protein Conformation/drug effects Quinolones/pharmacology Receptors, Dopamine D2/chemistry,metabolism
Chemicals
Antipsychotic Agents Ligands Piperazines Quinolones Receptors, Dopamine D2 Aripiprazole GTP-Binding Protein alpha Subunits, Gi-Go Dopamine
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Kling Ralf C
Department of Chemistry and Pharmacy, Emil Fischer Center, Friedrich Alexander University, Erlangen, Germany; Department of Chemistry and Pharmacy, Computer Chemistry Center, Friedrich Alexander University, Erlangen, Germany.
Tschammer Nuska
Department of Chemistry and Pharmacy, Emil Fischer Center, Friedrich Alexander University, Erlangen, Germany.
Lanig Harald
Department of Chemistry and Pharmacy, Computer Chemistry Center, Friedrich Alexander University, Erlangen, Germany; Central Institute for Scientific Computing, Friedrich Alexander University, Erlangen, Germany.
Clark Timothy
Department of Chemistry and Pharmacy, Computer Chemistry Center, Friedrich Alexander University, Erlangen, Germany; Centre for Molecular Design, University of Portsmouth, King Henry Building, Portsmouth, United Kingdom.
Gmeiner Peter
Department of Chemistry and Pharmacy, Emil Fischer Center, Friedrich Alexander University, Erlangen, Germany.
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Article Info
Journal
PloS one
Abbr.
PLoS One
ISSN
1932-6203
Published
2014-00-00
Epub
2014-00-16
Pages
e100069
Language
English
Region
United States
NLM ID
101285081
PMCID
PMC4059746
Subset
IM
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