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PMID: 22037586 Published · ppublish English Journal Article

Molecular dynamics simulations of the effect of the G-protein and diffusible ligands on the β2-adrenergic receptor.

Journal of molecular biology ·Vol. 414 ·No. 4 ·2011-12-09 ·Pages 611-23

Goetz A, Lanig H, Gmeiner P, Clark T

Abstract

G-protein-coupled receptors have extraordinary therapeutic potential as targets for a broad spectrum of diseases. Understanding their function at the molecular level is therefore essential. A variety of crystal structures have made the investigation of the inactive receptor state possible. Recently released X-ray structures of opsin and the β(2)-adrenergic receptor (β(2)AR) have provided insight into the active receptor state. In addition, we have contributed to the crystal structure of an irreversible agonist-β(2) adrenoceptor complex. These extensive studies and biophysical investigations have revealed that agonist binding leads to a low-affinity conformation of the active state that is suggested to facilitate G-protein binding. The high-affinity receptor state, which promotes signal transduction, is only formed in the presence of both agonist and G-protein. Despite numerous crystal structures, it is not yet clear how ligands tune receptor dynamics and G-protein binding. We have now used molecular dynamics simulations to elucidate the distinct impact of agonist and inverse agonist on receptor conformation and G-protein binding by investigating the influence of the ligands on the structure and dynamics of a complex composed of β(2)AR and the C-terminal end of the Gα(s) subunit (GαCT). The simulations clearly showed that the agonist isoprenaline and the inverse agonist carazolol influence the ligand-binding site and the interaction between β(2)AR and GαCT differently. Isoprenaline induced an inward motion of helix 5, whereas carazolol blocked the rearrangement of the extracellular part of the receptor. Moreover, in the presence of isoprenaline, β(2)AR and GαCT form a stable interaction that is destabilized by carazolol.

MeSH Terms
Adrenergic beta-2 Receptor Agonists/chemistry,pharmacology Binding Sites/drug effects Crystallography, X-Ray/methods Diffusion GTP-Binding Proteins/chemistry,metabolism Isoproterenol/chemistry,pharmacology Ligands Models, Molecular Molecular Dynamics Simulation Opsins/chemistry,metabolism Propanolamines/chemistry,pharmacology Protein Binding/drug effects Protein Structure, Secondary Receptors, Adrenergic, beta-2/chemistry,metabolism Receptors, G-Protein-Coupled/chemistry,metabolism Signal Transduction/drug effects
Chemicals
Adrenergic beta-2 Receptor Agonists Ligands Opsins Propanolamines Receptors, Adrenergic, beta-2 Receptors, G-Protein-Coupled carazolol GTP-Binding Proteins Isoproterenol
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Goetz Angela
Department of Chemistry and Pharmacy, Emil Fischer Center, Friedrich Alexander University, Schuhstrasse 19, 91052 Erlangen, Germany.
Lanig Harald
Gmeiner Peter
Clark Timothy
Article Info
Journal
Journal of molecular biology
Abbr.
J Mol Biol
ISSN
1089-8638
Published
2011-12-09
Epub
2011-00-20
Pages
611-23
Language
English
Region
England
NLM ID
2985088R
Subset
IM
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