Home LiteratureArticle Details
PMID: 17145948 Published · ppublish English Comparative Study Journal Article Research Support, Non-U.S. Gov't

Identification of candidates for a subunit vaccine against extraintestinal pathogenic Escherichia coli.

Infection and immunity ·Vol. 75 ·No. 4 ·2007-04-00 ·Pages 1916-25

Durant L, Metais A, Soulama-Mouze C, Genevard JM, Nassif X, Escaich S

Abstract

Extraintestinal pathogenic Escherichia coli (ExPEC) strains cause a large spectrum of infections. The majority of ExPEC strains are closely related to the B2 or the D phylogenetic group. The aim of our study was to develop a protein-based vaccine against these ExPEC strains. To this end, we identified ExPEC-specific genomic regions, using a comparative genome analysis, between the nonpathogenic E. coli strain K-12 MG1655 and ExPEC strains C5 (meningitis isolate) and CFT073 (urinary tract infection isolate). The analysis of these genomic regions allowed the selection of 40 open reading frames, which are conserved among B2/D clinical isolates and encode proteins with putative outer membrane localization. These genes were cloned, and recombinant proteins were purified and assessed as vaccine candidates. After immunization of BALB/c mice, five proteins induced a significant protective immunity against a lethal challenge with a clinical E. coli strain of the B2 group. In passive immunization assays, antigen-specific antibodies afforded protection to naive mice against a lethal challenge. Three of these antigens were related to iron acquisition metabolism, an important virulence factor of the ExPEC, and two corresponded to new, uncharacterized proteins. Due to the large number of genetic differences that exists between commensal and pathogenic strains of E. coli, our results demonstrate that it is possible to identify targets that elicit protective immune responses specific to those strains. The five protective antigens could constitute the basis for a preventive subunit vaccine against diseases caused by ExPEC strains.

MeSH Terms
Animals Antibodies, Bacterial/immunology Bacterial Outer Membrane Proteins/genetics,immunology Biological Transport Disease Models, Animal Escherichia coli/immunology,isolation & purification Escherichia coli Infections/immunology,microbiology,prevention & control Escherichia coli Proteins/genetics,immunology Escherichia coli Vaccines/immunology Female Genome, Bacterial Humans Immunization, Passive Mice Mice, Inbred BALB C Vaccines, Subunit/immunology Vaccines, Synthetic/genetics,immunology Virulence Factors/genetics,immunology
Chemicals
Antibodies, Bacterial Bacterial Outer Membrane Proteins Escherichia coli Proteins Escherichia coli Vaccines Vaccines, Subunit Vaccines, Synthetic Virulence Factors
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Durant Lionel
Mutabilis SA, 102 route de Noisy, 93230 Romainville, France.
Metais Arnaud
Soulama-Mouze Coralie
Genevard Jean-Marie
Nassif Xavier
Escaich Sonia
References (82)
82 references, click to expand
  1. Extensive mosaic structure revealed by the complete genome sequence of uropathogenic Escherichia coli.
    Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):17020-4 PMID: 12471157
  2. Identification of a gene encoding heat-resistant agglutinin in Escherichia coli as a putative virulence factor in urinary tract infection.
    J Clin Microbiol. 2003 Jan;41(1):285-9 PMID: 12517862
  3. Two years into reverse vaccinology.
    Vaccine. 2003 Jan 30;21(7-8):605-10 PMID: 12531326
  4. Analysis of genome plasticity in pathogenic and commensal Escherichia coli isolates by use of DNA arrays.
    J Bacteriol. 2003 Mar;185(6):1831-40 PMID: 12618447
  5. Rapid identification of Escherichia coli pathotypes by virulence gene detection with DNA microarrays.
    J Clin Microbiol. 2003 May;41(5):2113-25 PMID: 12734257
  6. Medical and economic impact of extraintestinal infections due to Escherichia coli: focus on an increasingly important endemic problem.
    Microbes Infect. 2003 Apr;5(5):449-56 PMID: 12738001
  7. DegS is necessary for virulence and is among extraintestinal Escherichia coli genes induced in murine peritonitis.
    Infect Immun. 2003 Jun;71(6):3088-96 PMID: 12761086
  8. Molecular analysis and experimental virulence of French and North American Escherichia coli neonatal meningitis isolates: identification of a new virulent clone.
    J Infect Dis. 2003 Jun 15;187(12):1895-906 PMID: 12792866
  9. Bacterial iron homeostasis.
    FEMS Microbiol Rev. 2003 Jun;27(2-3):215-37 PMID: 12829269
  10. Genome-based bioinformatic selection of chromosomal Bacillus anthracis putative vaccine candidates coupled with proteomic identification of surface-associated antigens.
    Infect Immun. 2003 Aug;71(8):4563-79 PMID: 12874336
  11. The Siderophore receptor IroN of extraintestinal pathogenic Escherichia coli is a potential vaccine candidate.
    Infect Immun. 2003 Dec;71(12):7164-9 PMID: 14638809
  12. Neonatal sepsis in hospital-born babies: bacterial isolates and antibiotic susceptibility patterns.
    J Coll Physicians Surg Pak. 2003 Nov;13(11):629-32 PMID: 14700488
  13. The siderophore receptor IroN, but not the high-pathogenicity island or the hemin receptor ChuA, contributes to the bacteremic step of Escherichia coli neonatal meningitis.
    Infect Immun. 2004 Feb;72(2):1216-20 PMID: 14742579
  14. Structure of the OmpA-like domain of RmpM from Neisseria meningitidis.
    Mol Microbiol. 2004 Feb;51(4):1027-37 PMID: 14763978
  15. Antibody responses and protection from pyelonephritis following vaccination with purified Escherichia coli PapDG protein.
    J Urol. 2004 Apr;171(4):1682-5 PMID: 15017266
  16. GNA33 of Neisseria meningitidis is a lipoprotein required for cell separation, membrane architecture, and virulence.
    Infect Immun. 2004 Apr;72(4):1914-9 PMID: 15039310
  17. Phase and antigenic variation in bacteria.
    Clin Microbiol Rev. 2004 Jul;17(3):581-611, table of contents PMID: 15258095
  18. Current concepts on Escherichia coli K1 translocation of the blood-brain barrier.
    FEMS Immunol Med Microbiol. 2004 Nov 1;42(3):271-9 PMID: 15477040
  19. Binding characteristics of S fimbriated Escherichia coli to isolated brain microvascular endothelial cells.
    Am J Pathol. 1994 Nov;145(5):1228-36 PMID: 7977653
  20. Analysis of the pesticin receptor from Yersinia pestis: role in iron-deficient growth and possible regulation by its siderophore.
    J Bacteriol. 1995 Apr;177(7):1824-33 PMID: 7896707
  21. Prevention of mucosal Escherichia coli infection by FimH-adhesin-based systemic vaccination.
    Science. 1997 Apr 25;276(5312):607-11 PMID: 9110982
  22. The complete genome sequence of Escherichia coli K-12.
    Science. 1997 Sep 5;277(5331):1453-62 PMID: 9278503
  23. Prevalence of the "high-pathogenicity island" of Yersinia species among Escherichia coli strains that are pathogenic to humans.
    Infect Immun. 1998 Feb;66(2):480-5 PMID: 9453599
  24. Phylogenetic analysis of Escherichia coli strains causing neonatal meningitis suggests horizontal gene transfer from a predominant pool of highly virulent B2 group strains.
    J Infect Dis. 1998 Mar;177(3):642-50 PMID: 9498443
  25. Characterization of a hemoglobin protease secreted by the pathogenic Escherichia coli strain EB1.
    J Exp Med. 1998 Sep 21;188(6):1091-1103 PMID: 9743528
  26. The link between phylogeny and virulence in Escherichia coli extraintestinal infection.
    Infect Immun. 1999 Feb;67(2):546-53 PMID: 9916057
  27. A neural network method for identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites.
    Int J Neural Syst. 1997 Oct-Dec;8(5-6):581-99 PMID: 10065837
  28. Yersiniabactin from Yersinia pestis: biochemical characterization of the siderophore and its role in iron transport and regulation.
    Microbiology. 1999 May;145 ( Pt 5):1181-90 PMID: 10376834
  29. The prevalence of antimicrobial resistance among uropathogens causing acute uncomplicated cystitis in young women.
    Int J Antimicrob Agents. 1999 May;11(3-4):305-8 PMID: 10394988
  30. Frequency of isolation of pathogens from bloodstream, nosocomial pneumonia, skin and soft tissue, and urinary tract infections occurring in European patients.
    Eur J Clin Microbiol Infect Dis. 2001 Mar;20(3):188-91 PMID: 11347669
  31. Commensal Escherichia coli isolates are phylogenetically distributed among geographically distinct human populations.
    Microbiology. 2001 Jun;147(Pt 6):1671-6 PMID: 11390698
  32. Increasing antimicrobial resistance and the management of uncomplicated community-acquired urinary tract infections.
    Ann Intern Med. 2001 Jul 3;135(1):41-50 PMID: 11434731
  33. Identification of vaccine candidate antigens from a genomic analysis of Porphyromonas gingivalis.
    Vaccine. 2001 Jul 20;19(30):4135-42 PMID: 11457538
  34. Identification of a new iron-regulated virulence gene, ireA, in an extraintestinal pathogenic isolate of Escherichia coli.
    Infect Immun. 2001 Oct;69(10):6209-16 PMID: 11553562
  35. Transcriptome of uropathogenic Escherichia coli during urinary tract infection.
    Infect Immun. 2004 Nov;72(11):6373-81 PMID: 15501767
  36. Mechanism of assembly of the outer membrane of Salmonella typhimurium. Isolation and characterization of cytoplasmic and outer membrane.
    J Biol Chem. 1972 Jun 25;247(12):3962-72 PMID: 4555955
  37. Six widespread bacterial clones among Escherichia coli K1 isolates.
    Infect Immun. 1983 Jan;39(1):315-35 PMID: 6218094
  38. Antibodies to Escherichia coli K and O antigens in protection against acute pyelonephritis.
    Prog Allergy. 1983;33:275-88 PMID: 6187016
  39. Aberrant migration of lipopolysaccharide in sodium dodecyl sulfate/polyacrylamide gel electrophoresis.
    Eur J Biochem. 1983 Jul 1;133(3):685-8 PMID: 6190650
  40. Standard reference strains of Escherichia coli from natural populations.
    J Bacteriol. 1984 Feb;157(2):690-3 PMID: 6363394
  41. Genomic sequencing.
    Proc Natl Acad Sci U S A. 1984 Apr;81(7):1991-5 PMID: 6326095
  42. Passive immunization with antibodies against iron-regulated outer membrane proteins protects turkeys from Escherichia coli septicemia.
    Infect Immun. 1987 May;55(5):1239-42 PMID: 3552995
  43. Role of type 1 and S fimbriae in the pathogenesis of Escherichia coli O18:K1 bacteremia and meningitis in the infant rat.
    Infect Immun. 1988 Apr;56(4):892-7 PMID: 2894363
  44. Protective effects of murine monoclonal antibodies in experimental septicemia: E. coli antibodies protect against different serotypes of E. coli.
    J Infect Dis. 1989 Apr;159(4):641-7 PMID: 2647860
  45. Analysis of genes coding for the sialic acid-binding adhesin and two other minor fimbrial subunits of the S-fimbrial adhesin determinant of Escherichia coli.
    Mol Microbiol. 1989 Dec;3(12):1735-44 PMID: 2576095
  46. Pyelonephritogenic Escherichia coli and killing of cultured human renal proximal tubular epithelial cells: role of hemolysin in some strains.
    Infect Immun. 1990 May;58(5):1281-9 PMID: 2182540
  47. Phylogenetic distribution of branched RNA-linked multicopy single-stranded DNA among natural isolates of Escherichia coli.
    J Bacteriol. 1990 Nov;172(11):6175-81 PMID: 1699928
  48. Basic local alignment search tool.
    J Mol Biol. 1990 Oct 5;215(3):403-10 PMID: 2231712
  49. Bacteremia due to Escherichia coli: a study of 861 episodes.
    Rev Infect Dis. 1990 Nov-Dec;12(6):1008-18 PMID: 2267481
  50. Alpha-hemolysin contributes to the pathogenicity of piliated digalactoside-binding Escherichia coli in the kidney: efficacy of an alpha-hemolysin vaccine in preventing renal injury in the BALB/c mouse model of pyelonephritis.
    Infect Immun. 1991 Mar;59(3):1153-61 PMID: 1671776
  51. Outer membrane protein A (OmpA) contributes to serum resistance and pathogenicity of Escherichia coli K-1.
    Infect Immun. 1991 Jul;59(7):2252-8 PMID: 1646768
  52. A simple method to renature DNA-binding proteins separated by SDS-polyacrylamide gel electrophoresis.
    Nucleic Acids Res. 1993 Dec 25;21(25):6040-1 PMID: 8290367
  53. Complete genome sequence of a multiple drug resistant Salmonella enterica serovar Typhi CT18.
    Nature. 2001 Oct 25;413(6858):848-52 PMID: 11677608
  54. Outer membrane composition of a lipopolysaccharide-deficient Neisseria meningitidis mutant.
    EMBO J. 2001 Dec 17;20(24):6937-45 PMID: 11742971
  55. Escherichia coli hemoglobin protease autotransporter contributes to synergistic abscess formation and heme-dependent growth of Bacteroides fragilis.
    Infect Immun. 2002 Jan;70(1):5-10 PMID: 11748157
  56. Extraintestinal pathogenic Escherichia coli: "the other bad E coli".
    J Lab Clin Med. 2002 Mar;139(3):155-62 PMID: 11944026
  57. Molecular epidemiology of 3 putative virulence genes for Escherichia coli urinary tract infection-usp, iha, and iroN(E. coli).
    J Infect Dis. 2002 May 15;185(10):1521-4 PMID: 11992291
  58. NadA, a novel vaccine candidate of Neisseria meningitidis.
    J Exp Med. 2002 Jun 3;195(11):1445-54 PMID: 12045242
  59. Identification of Escherichia coli genes that are specifically expressed in a murine model of septicemic infection.
    Infect Immun. 2002 Jul;70(7):3404-12 PMID: 12065479
  60. Yersinia high-pathogenicity island contributes to virulence in Escherichia coli causing extraintestinal infections.
    Infect Immun. 2002 Sep;70(9):5335-7 PMID: 12183596
  61. Uropathogenic Escherichia coli as agents of diverse non-urinary tract extraintestinal infections.
    J Infect Dis. 2002 Sep 15;186(6):859-64 PMID: 12198625
  62. Extensive gene diversity in septicemic Escherichia coli strains.
    J Clin Microbiol. 2005 Jan;43(1):66-73 PMID: 15634952
  63. Genetic background of Escherichia coli and extended-spectrum beta-lactamase type.
    Emerg Infect Dis. 2005 Jan;11(1):54-61 PMID: 15705323
  64. Identification of a universal Group B streptococcus vaccine by multiple genome screen.
    Science. 2005 Jul 1;309(5731):148-50 PMID: 15994562
  65. Immunization with the binding domain of FimH, the adhesin of type 1 fimbriae, does not protect chickens against avian pathogenic Escherichia coli.
    Avian Pathol. 2005 Jun;34(3):264-72 PMID: 16191712
  66. Human IgG but not IgM antibodies can protect mice from the challenge with live O6 Escherichia coli.
    Scand J Immunol. 2005 Oct;62(4):353-60 PMID: 16253122
  67. Clonal analysis reveals high rate of structural mutations in fimbrial adhesins of extraintestinal pathogenic Escherichia coli.
    Mol Microbiol. 2006 Feb;59(3):975-88 PMID: 16420365
  68. Deaths: injuries, 2002.
    Natl Vital Stat Rep. 2006 Jan 31;54(10):1-124 PMID: 16485447
  69. Vaccination with FimH adhesin protects cynomolgus monkeys from colonization and infection by uropathogenic Escherichia coli.
    J Infect Dis. 2000 Feb;181(2):774-8 PMID: 10669375
  70. Identification of vaccine candidates against serogroup B meningococcus by whole-genome sequencing.
    Science. 2000 Mar 10;287(5459):1816-20 PMID: 10710308
  71. Identification of regions of the Escherichia coli chromosome specific for neonatal meningitis-associated strains.
    Infect Immun. 2000 Apr;68(4):2096-101 PMID: 10722606
  72. The twin arginine consensus motif of Tat signal peptides is involved in Sec-independent protein targeting in Escherichia coli.
    J Biol Chem. 2000 Apr 21;275(16):11591-6 PMID: 10766774
  73. Proposal for a new inclusive designation for extraintestinal pathogenic isolates of Escherichia coli: ExPEC.
    J Infect Dis. 2000 May;181(5):1753-4 PMID: 10823778
  74. The crystal structure of D-lactate dehydrogenase, a peripheral membrane respiratory enzyme.
    Proc Natl Acad Sci U S A. 2000 Aug 15;97(17):9413-8 PMID: 10944213
  75. Structure and sequence analysis of Yersinia YadA and Moraxella UspAs reveal a novel class of adhesins.
    EMBO J. 2000 Nov 15;19(22):5989-99 PMID: 11080146
  76. Efficacy and safety of recombinant human activated protein C for severe sepsis.
    N Engl J Med. 2001 Mar 8;344(10):699-709 PMID: 11236773
  77. Use of a whole genome approach to identify vaccine molecules affording protection against Streptococcus pneumoniae infection.
    Infect Immun. 2001 Mar;69(3):1593-8 PMID: 11179332
  78. The Yersinia high-pathogenicity island is highly predominant in virulence-associated phylogenetic groups of Escherichia coli.
    FEMS Microbiol Lett. 2001 Mar 15;196(2):153-7 PMID: 11267772
  79. Multidrug-resistant urinary tract isolates of Escherichia coli: prevalence and patient demographics in the United States in 2000.
    Antimicrob Agents Chemother. 2001 May;45(5):1402-6 PMID: 11302802
  80. Recognition of DNA by Fur: a reinterpretation of the Fur box consensus sequence.
    J Bacteriol. 2002 Nov;184(21):5826-32 PMID: 12374814
  81. Comparative genomics identifies the genetic islands that distinguish Neisseria meningitidis, the agent of cerebrospinal meningitis, from other Neisseria species.
    Infect Immun. 2002 Dec;70(12):7063-72 PMID: 12438387
  82. IroN functions as a siderophore receptor and is a urovirulence factor in an extraintestinal pathogenic isolate of Escherichia coli.
    Infect Immun. 2002 Dec;70(12):7156-60 PMID: 12438401
Article Info
Journal
Infection and immunity
Abbr.
Infect Immun
ISSN
0019-9567
Published
2007-04-00
Epub
2006-00-04
Pages
1916-25
Language
English
Region
United States
NLM ID
0246127
PMCID
PMC1865706
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com