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PMID: 16679373 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Kinetic measurement of transient dimerization and dissociation reactions of Arabidopsis phototropin 1 LOV2 domain.

Biophysical journal ·Vol. 91 ·No. 2 ·2006-07-15 ·Pages 645-53

Nakasone Y, Eitoku T, Matsuoka D, Tokutomi S, Terazima M

Abstract

Photochemical reaction of a plant blue-light photoreceptor, Arabidopsis phototropin 1-LOV (light-oxygen-voltage sensing) domain 2, was studied with a view to the diffusion coefficients (D) using the pulsed-laser-induced transient grating method. Although the reaction dynamics completes at a rate of several microseconds as long as it is monitored by the absorption change, the diffusion coefficient was found to be time-dependent in a time range of submilliseconds to seconds. The observed signal can be analyzed by the two-state model, which includes the D-value decrease from D of the reactant (9.8 +/- 0.4) x 10(-11) m2/s to D of the product (8.0 +/- 0.4) x 10(-11) m2/s. The D-value of the reactant implies that the dominant form in the ground state of phototropin 1 LOV2 is the monomeric form in a concentration range of 50-200 microM. According to the Stokes-Einstein relationship, the D-change can be explained by a volume increase of 1.8 times. Furthermore, the rate of the D-change was roughly proportional to the concentration of the sample. These two observations indicate that the LOV2 domain transiently forms a dimer upon photoexcitation. When the sample concentration is increased (>180 microM), a new signal component appears within a few milliseconds. This signal represents a D increase from 8.0 x 10(-11) m2/s to 9.8 x 10(-11) m2/s with a time constant of 300 micros. The completely opposite D-change from that observed in a lower concentration, as well as the concentration dependence, implies that a dimer is formed in the ground state in a higher concentration range, even though the fraction of the dimer is still minor in this range. This dimer is photodissociated, with a time constant of 300 micros. This research clearly shows that the time-resolved diffusion measurement is a very powerful tool for detecting spectrally silent association/dissociation processes during chemical reactions. The photoreaction of the LOV2 domain is discussed.

MeSH Terms
Arabidopsis Proteins/chemistry Cryptochromes Dimerization Flavoproteins/chemistry Kinetics Lasers Photosynthetic Reaction Center Complex Proteins/chemistry Recombinant Proteins/chemistry
Chemicals
Arabidopsis Proteins Cryptochromes Flavoproteins Photosynthetic Reaction Center Complex Proteins Recombinant Proteins
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Nakasone Yusuke
Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto, Japan.
Eitoku Takeshi
Matsuoka Daisuke
Tokutomi Satoru
Terazima Masahide
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Article Info
Journal
Biophysical journal
Abbr.
Biophys J
ISSN
0006-3495
Published
2006-07-15
Epub
2006-00-05
Pages
645-53
Language
English
Region
United States
NLM ID
0370626
PMCID
PMC1483119
Subset
IM
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