Home LiteratureArticle Details
PMID: 3515317 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Nucleotide sequence of the CytR regulatory gene of E. coli K-12.

Nucleic acids research ·Vol. 14 ·No. 5 ·1986-03-11 ·Pages 2215-28

Valentin-Hansen P, Larsen JE, Højrup P, Short SA, Barbier CS

Abstract

We have determined the nucleotide sequence of the cytR gene, which codes for the Cyt repressor (CytR). The coding region consists of 1023 or 1029 bp. The subunits of CytR are thus predicted to consist of 341 or 343 residues. It is shown that the N-terminal segment of the polypeptide is structurally similar to the DNA-binding region of known DNA-binding proteins. In addition, there exists an exceptionally high amino acid sequence homology between CytR and the Gal repressor, indicating a common origin of evolution.

MeSH Terms
Amino Acid Sequence Bacterial Proteins/genetics Base Sequence Cloning, Molecular Codon DNA-Binding Proteins/genetics Escherichia coli/genetics Escherichia coli Proteins Promoter Regions, Genetic Receptors, Cyclic AMP/metabolism Repressor Proteins/genetics Transcription Factors/genetics
Chemicals
Bacterial Proteins Codon CytR protein, E coli DNA-Binding Proteins Escherichia coli Proteins Receptors, Cyclic AMP Repressor Proteins Transcription Factors
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Valentin-Hansen P
Larsen J E
Højrup P
Short S A
Barbier C S
References (27)
27 references, click to expand
  1. How ribosomes select initiator regions in mRNA: base pair formation between the 3' terminus of 16S rRNA and the mRNA during initiation of protein synthesis in Escherichia coli.
    Proc Natl Acad Sci U S A. 1975 Dec;72(12):4734-8 PMID: 1107998
  2. Studies on deo operon regulation in Escherichia coli: cloning and expression of the cytR structural gene.
    Gene. 1985;36(1-2):37-44 PMID: 2998936
  3. Nucleotide sequence of cro, cII and part of the O gene in phage lambda DNA.
    Nature. 1978 Mar 30;272(5652):410-4 PMID: 264238
  4. Sequence of the lacI gene.
    Nature. 1978 Aug 24;274(5673):765-9 PMID: 355891
  5. Unusual location and function of the operator in the Escherichia coli galactose operon.
    Nature. 1979 Jun 7;279(5713):494-500 PMID: 221831
  6. DNA sequence analysis of the transposon Tn3: three genes and three sites involved in transposition of Tn3.
    Cell. 1979 Dec;18(4):1153-63 PMID: 391406
  7. Regulatory sequences involved in the promotion and termination of RNA transcription.
    Annu Rev Genet. 1979;13:319-53 PMID: 94251
  8. E. coli RNA polymerase interacts homologously with two different promoters.
    Cell. 1980 Jun;20(2):269-81 PMID: 6248238
  9. DNA sequence of the araC regulatory gene from Escherichia coli B/r.
    Nucleic Acids Res. 1980 Nov 25;8(22):5267-74 PMID: 7008027
  10. Structure of catabolite gene activator protein at 2.9 A resolution suggests binding to left-handed B-DNA.
    Nature. 1981 Apr 30;290(5809):744-9 PMID: 6261152
  11. Structure of the cro repressor from bacteriophage lambda and its interaction with DNA.
    Nature. 1981 Apr 30;290(5809):754-8 PMID: 6452580
  12. Molecular cloning and nucleotide sequencing of the gene for E. coli cAMP receptor protein.
    Nucleic Acids Res. 1982 Feb 25;10(4):1345-61 PMID: 6280140
  13. Cloning and sequence of the crp gene of Escherichia coli K 12.
    Nucleic Acids Res. 1982 Feb 25;10(4):1363-78 PMID: 6280141
  14. The operator-binding domain of lambda repressor: structure and DNA recognition.
    Nature. 1982 Jul 29;298(5873):443-7 PMID: 7088190
  15. Homology among DNA-binding proteins suggests use of a conserved super-secondary structure.
    Nature. 1982 Jul 29;298(5873):447-51 PMID: 6896364
  16. Sequence of galR gene indicates a common evolutionary origin of lac and gal repressor in Escherichia coli.
    Proc Natl Acad Sci U S A. 1982 Apr;79(8):2427-31 PMID: 6283521
  17. Repressor structure and the mechanism of positive control.
    Cell. 1983 Feb;32(2):319-25 PMID: 6218886
  18. A control element within a structural gene: the gal operon of Escherichia coli.
    Cell. 1983 Mar;32(3):783-8 PMID: 6299576
  19. Compilation and analysis of Escherichia coli promoter DNA sequences.
    Nucleic Acids Res. 1983 Apr 25;11(8):2237-55 PMID: 6344016
  20. Construction of improved M13 vectors using oligodeoxynucleotide-directed mutagenesis.
    Gene. 1983 Dec;26(1):101-6 PMID: 6323249
  21. Homologies between different procaryotic DNA-binding regulatory proteins and between their sites of action.
    EMBO J. 1982;1(5):591-5 PMID: 6234163
  22. Tandem CRP binding sites in the deo operon of Escherichia coli K-12.
    EMBO J. 1982;1(9):1049-54 PMID: 6329724
  23. Model of specific complex between catabolite gene activator protein and B-DNA suggested by electrostatic complementarity.
    Proc Natl Acad Sci U S A. 1984 Jul;81(13):3973-7 PMID: 6377305
  24. Protein-DNA recognition.
    Annu Rev Biochem. 1984;53:293-321 PMID: 6236744
  25. Demonstration of two operator elements in gal: in vitro repressor binding studies.
    Proc Natl Acad Sci U S A. 1984 Oct;81(19):6100-4 PMID: 6385008
  26. The primary structure of the DeoR repressor from Escherichia coli K-12.
    Nucleic Acids Res. 1985 Aug 26;13(16):5927-36 PMID: 2994018
  27. Primary structure of the lambda repressor.
    Biochemistry. 1978 Mar 21;17(6):1092-100 PMID: 629949
Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
0305-1048
Published
1986-03-11
Pages
2215-28
Language
English
Region
England
NLM ID
0411011
PMCID
PMC339653
Subset
IM
Databases
GENBANK
X03683
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com