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PMID: 6344016 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S. Review

Compilation and analysis of Escherichia coli promoter DNA sequences.

Nucleic acids research ·Vol. 11 ·No. 8 ·1983-04-25 ·Pages 2237-55

Hawley DK, McClure WR

Abstract

The DNA sequence of 168 promoter regions (-50 to +10) for Escherichia coli RNA polymerase were compiled. The complete listing was divided into two groups depending upon whether or not the promoter had been defined by genetic (promoter mutations) or biochemical (5' end determination) criteria. A consensus promoter sequence based on homologies among 112 well-defined promoters was determined that was in substantial agreement with previous compilations. In addition, we have tabulated 98 promoter mutations. Nearly all of the altered base pairs in the mutants conform to the following general rule: down-mutations decrease homology and up-mutations increase homology to the consensus sequence.

MeSH Terms
Base Sequence DNA, Bacterial/genetics DNA-Directed RNA Polymerases/metabolism Escherichia coli/genetics Mutation Operon
Chemicals
DNA, Bacterial DNA-Directed RNA Polymerases
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Hawley D K
McClure W R
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Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
0305-1048
DOI
10.1093/nar/11.8.2237
Published
1983-04-25
Pages
2237-55
Language
English
Region
England
NLM ID
0411011
PMCID
PMC325881
Subset
IM
Grants
NIGMS NIH HHS · GM30375 · United States
External Links
PubMed source DOI: 10.1093/nar/11.8.2237 PMC Full Text View journal details
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