Home LiteratureArticle Details
PMID: 3083400 Published · ppublish English Comparative Study Journal Article Research Support, U.S. Gov't, P.H.S.

A processed chicken pseudogene (CPS1) related to the ras oncogene superfamily.

Nucleic acids research ·Vol. 14 ·No. 5 ·1986-03-11 ·Pages 2123-38

Alsip GR, Konkel DA

Abstract

We describe the first polyA-containing processed pseudogene reported in the chicken. It includes a 0.52 kb open reading frame which could encode a 175 amino acid protein. The putative protein shows extensive homology to the ras oncogene superfamily, being most closely related to the yeast protein YP2. It is one of the two most divergent members of the ras superfamily yet described and is the most homologous of any ras-related protein to the G-protein alpha-transducin. The chicken genome contains at least one other gene highly homologous to CPS1; at least one member of the CPS1 family is active, but only early in chicken development. This pattern of expression, and the presence of mutations in regions known to activate human c-ras genes to oncogenicity, suggest that CPS1 may represent a new oncogene family.

MeSH Terms
Animals Base Sequence Chickens/genetics Cloning, Molecular DNA, Fungal/genetics GTP-Binding Proteins/genetics Gene Conversion Oncogenes Saccharomyces cerevisiae/genetics Sequence Homology, Nucleic Acid
Chemicals
DNA, Fungal GTP-Binding Proteins
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Alsip G R
Konkel D A
References (40)
40 references, click to expand
  1. 3' non-coding region sequences in eukaryotic messenger RNA.
    Nature. 1976 Sep 16;263(5574):211-4 PMID: 822353
  2. Activation of Ha-ras p21 by substitution, deletion, and insertion mutations.
    Mol Cell Biol. 1985 Aug;5(8):1809-13 PMID: 3018526
  3. The evolution and sequence comparison of two recently diverged mouse chromosomal beta--globin genes.
    Cell. 1979 Nov;18(3):865-73 PMID: 519759
  4. Unusual alpha-globin-like gene that has cleanly lost both globin intervening sequences.
    Proc Natl Acad Sci U S A. 1980 May;77(5):2806-9 PMID: 6930668
  5. A mouse alpha-globin-related pseudogene lacking intervening sequences.
    Nature. 1980 Jul 17;286(5770):222-6 PMID: 6250049
  6. Hybridization of denatured RNA and small DNA fragments transferred to nitrocellulose.
    Proc Natl Acad Sci U S A. 1980 Sep;77(9):5201-5 PMID: 6159641
  7. Human fetal G gamma- and A gamma-globin genes: complete nucleotide sequences suggest that DNA can be exchanged between these duplicated genes.
    Cell. 1980 Oct;21(3):627-38 PMID: 7438203
  8. The effect of temperature-sensitive RNA mutants on the transcription products from cloned ribosomal protein genes of yeast.
    Cell. 1981 Jun;24(3):679-86 PMID: 7018694
  9. Multiple differences between the nucleic acid sequences of the IgG2aa and IgG2ab alleles of the mouse.
    Proc Natl Acad Sci U S A. 1981 Jul;78(7):4495-9 PMID: 6170065
  10. A convenient and adaptable package of DNA sequence analysis programs for microcomputers.
    Nucleic Acids Res. 1982 Jan 11;10(1):51-9 PMID: 6278412
  11. Nucleotide sequence surrounding multiple polyadenylation sites in the mouse dihydrofolate reductase gene.
    J Biol Chem. 1982 May 10;257(9):5143-7 PMID: 6121807
  12. Gene evolution in the chicken beta-globin cluster.
    Cell. 1982 Mar;28(3):515-21 PMID: 6896168
  13. Characterization of the phosphorylation sites and the surrounding amino acid sequences of the p21 transforming proteins coded for by the Harvey and Kirsten strains of murine sarcoma viruses.
    J Biol Chem. 1982 Oct 10;257(19):11767-73 PMID: 6288698
  14. "Nonrandom" DNA sequence analysis in bacteriophage M13 by the dideoxy chain-termination method.
    Proc Natl Acad Sci U S A. 1982 Jul;79(14):4298-302 PMID: 6956859
  15. Human genome contains four genes homologous to transforming genes of Harvey and Kirsten murine sarcoma viruses.
    Proc Natl Acad Sci U S A. 1982 Aug;79(16):4848-52 PMID: 6289320
  16. The sequences of an expressed rat alpha-tubulin gene and a pseudogene with an inserted repetitive element.
    Nature. 1982 Nov 25;300(5890):330-5 PMID: 6927856
  17. Structure of a human beta-actin-related pseudogene which lacks intervening sequences.
    Nucleic Acids Res. 1982 Dec 11;10(23):7843-9 PMID: 6296793
  18. Nonallelic members of the cytochrome c multigene family of the rat may arise through different messenger RNAs.
    Cell. 1983 Feb;32(2):473-82 PMID: 6130852
  19. Complete nucleotide sequences of the T24 human bladder carcinoma oncogene and its normal homologue.
    Nature. 1983 Mar 3;302(5903):33-7 PMID: 6298635
  20. Predicted nucleotide-binding properties of p21 protein and its cancer-associated variant.
    Nature. 1983 Apr 28;302(5911):842-4 PMID: 6843652
  21. Acquisition of transforming properties by alternative point mutations within c-bas/has human proto-oncogene.
    Nature. 1983 Jun 30;303(5920):775-9 PMID: 6866079
  22. Buffer gradient gels and 35S label as an aid to rapid DNA sequence determination.
    Proc Natl Acad Sci U S A. 1983 Jul;80(13):3963-5 PMID: 6575390
  23. Tissue-specific expression of a chicken calmodulin pseudogene lacking intervening sequences.
    Proc Natl Acad Sci U S A. 1983 Nov;80(21):6485-9 PMID: 6579534
  24. A yeast gene encoding a protein homologous to the human c-has/bas proto-oncogene product.
    Nature. 1983 Dec 15-21;306(5944):704-7 PMID: 6318115
  25. ras-Related gene sequences identified and isolated from Saccharomyces cerevisiae.
    Nature. 1983 Dec 15-21;306(5944):707-9 PMID: 6318116
  26. G proteins and dual control of adenylate cyclase.
    Cell. 1984 Mar;36(3):577-9 PMID: 6321035
  27. Homologies in the primary structure of GTP-binding proteins: the nucleotide-binding site of EF-Tu and p21.
    EMBO J. 1984 Feb;3(2):339-41 PMID: 6609071
  28. Processed pseudogenes. Characteristics and evolution.
    Biochim Biophys Acta. 1984 Jul 18;782(3):231-41 PMID: 6733106
  29. The product of ras is a GTPase and the T24 oncogenic mutant is deficient in this activity.
    Nature. 1984 Sep 20-26;311(5983):273-5 PMID: 6148703
  30. Expression of cellular oncogenes during embryonic and fetal development of the mouse.
    Proc Natl Acad Sci U S A. 1984 Nov;81(22):7141-5 PMID: 6594688
  31. Rapid and sensitive protein similarity searches.
    Science. 1985 Mar 22;227(4693):1435-41 PMID: 2983426
  32. Sequence of the alpha subunit of photoreceptor G protein: homologies between transducin, ras, and elongation factors.
    Science. 1985 Apr 5;228(4695):96-9 PMID: 3856323
  33. A rapid single-stranded cloning strategy for producing a sequential series of overlapping clones for use in DNA sequencing: application to sequencing the corn mitochondrial 18 S rDNA.
    Plasmid. 1985 Jan;13(1):31-40 PMID: 3991809
  34. A novel ras-related gene family.
    Cell. 1985 May;41(1):31-40 PMID: 3888408
  35. Novel chicken actin gene: third cytoplasmic isoform.
    Mol Cell Biol. 1985 May;5(5):1151-62 PMID: 4000121
  36. Primary structure of the alpha-subunit of transducin and its relationship to ras proteins.
    Nature. 1985 May 16-22;315(6016):242-5 PMID: 3923359
  37. A new strategy to create ordered deletions for rapid nucleotide sequencing.
    Gene. 1985;34(2-3):263-8 PMID: 3891520
  38. Amino acid sequence of the alpha subunit of transducin deduced from the cDNA sequence.
    Proc Natl Acad Sci U S A. 1985 Jul;82(13):4311-5 PMID: 2409555
  39. GTPase of bovine rod outer segments: the amino acid sequence of the alpha subunit as derived from the cDNA sequence.
    Proc Natl Acad Sci U S A. 1985 Jul;82(13):4316-20 PMID: 2989813
  40. Increased amplification of pBR322 plasmid deoxyribonucleic acid in Escherichia coli K-12 strains RR1 and chi1776 grown in the presence of high concentrations of nucleoside.
    J Bacteriol. 1979 Apr;138(1):270-2 PMID: 374372
Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
0305-1048
Published
1986-03-11
Pages
2123-38
Language
English
Region
England
NLM ID
0411011
PMCID
PMC339647
Subset
IM
Grants
NINDS NIH HHS · NS17026 · United States
Databases
GENBANK
X03682
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com