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PMID: 2823103 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S.

Saccharomyces cerevisiae positive regulatory gene PET111 encodes a mitochondrial protein that is translated from an mRNA with a long 5' leader.

Molecular and cellular biology ·Vol. 7 ·No. 8 ·1987-08-00 ·Pages 2728-34

Strick CA, Fox TD

Abstract

The yeast nuclear gene PET111 is required specifically for translation of the mitochondrion-coded mRNA for cytochrome c oxidase subunit II. We have determined the nucleotide sequence of a 3-kilobase segment of DNA that carries PET111. The sequence contains a single long open reading frame that predicts a basic protein of 718 amino acids. The PET111 gene product is a mitochondrial protein, since a hybrid protein which includes the amino-terminal 154 amino acids of PET111 fused to beta-galactosidase is specifically associated with mitochondria. PET111 is translated from a 2.9-kilobase mRNA which, interestingly, has an extended 5'-leader sequence containing four short open reading frames upstream of the long open reading frame. These open reading frames exhibit an interesting pattern of overlap with each other and with the PET111 reading frame.

MeSH Terms
Amino Acid Sequence Base Sequence DNA Restriction Enzymes Fungal Proteins/genetics Genes Genes, Fungal Genes, Regulator Mitochondria/metabolism Protein Biosynthesis Protein Sorting Signals/metabolism RNA, Messenger/genetics Saccharomyces cerevisiae/genetics,metabolism
Chemicals
Fungal Proteins Protein Sorting Signals RNA, Messenger DNA Restriction Enzymes
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Strick C A
Section of Biochemistry, Molecular and Cell Biology, Cornell University, Ithaca, New York 14853.
Fox T D
References (61)
61 references, click to expand
  1. Beta-galactosidase gene fusions for analyzing gene expression in escherichia coli and yeast.
    Methods Enzymol. 1983;100:293-308 PMID: 6312261
  2. Spectrophotometric measurements of the enzymatic formation of fumaric and cis-aconitic acids.
    Biochim Biophys Acta. 1950 Jan;4(1-3):211-4 PMID: 15403927
  3. How mitochondria import proteins.
    Biochim Biophys Acta. 1984 Jan 27;779(1):65-87 PMID: 6318829
  4. Compilation and analysis of sequences upstream from the translational start site in eukaryotic mRNAs.
    Nucleic Acids Res. 1984 Jan 25;12(2):857-72 PMID: 6694911
  5. Point mutations identify the conserved, intron-contained TACTAAC box as an essential splicing signal sequence in yeast.
    Cell. 1984 Mar;36(3):645-53 PMID: 6365330
  6. In vivo transcription of a eukaryotic regulatory gene.
    EMBO J. 1983;2(12):2179-84 PMID: 6321151
  7. Assembly of the mitochondrial membrane system. CBP1, a yeast nuclear gene involved in 5' end processing of cytochrome b pre-mRNA.
    J Biol Chem. 1984 Apr 25;259(8):4722-31 PMID: 6370993
  8. A nuclear mutation that post-transcriptionally blocks accumulation of a yeast mitochondrial gene product can be suppressed by a mitochondrial gene rearrangement.
    J Mol Biol. 1984 Jun 5;175(4):431-52 PMID: 6330366
  9. Intracellular targeting and import of an F1-ATPase beta-subunit-beta-galactosidase hybrid protein into yeast mitochondria.
    Proc Natl Acad Sci U S A. 1984 Jul;81(13):3983-7 PMID: 6330727
  10. Unidirectional digestion with exonuclease III creates targeted breakpoints for DNA sequencing.
    Gene. 1984 Jun;28(3):351-9 PMID: 6235151
  11. 5' untranslated sequences are required for the translational control of a yeast regulatory gene.
    Proc Natl Acad Sci U S A. 1984 Aug;81(16):5096-100 PMID: 6433345
  12. Efficient in vitro synthesis of biologically active RNA and RNA hybridization probes from plasmids containing a bacteriophage SP6 promoter.
    Nucleic Acids Res. 1984 Sep 25;12(18):7035-56 PMID: 6091052
  13. Evidence for translational regulation of the activator of general amino acid control in yeast.
    Proc Natl Acad Sci U S A. 1984 Oct;81(20):6442-6 PMID: 6387704
  14. A comparison of yeast ribosomal protein gene DNA sequences.
    Nucleic Acids Res. 1984 Nov 26;12(22):8295-312 PMID: 6390341
  15. The cleavable prepiece of an imported mitochondrial protein is sufficient to direct cytosolic dihydrofolate reductase into the mitochondrial matrix.
    FEBS Lett. 1984 Dec 10;178(2):306-10 PMID: 6096170
  16. Assembly of the mitochondrial membrane system. CBP6, a yeast nuclear gene necessary for synthesis of cytochrome b.
    J Biol Chem. 1985 Feb 10;260(3):1513-20 PMID: 2981859
  17. False starts in translational control of gene expression.
    Nature. 1985 Aug 15-21;316(6029):580-1 PMID: 4033756
  18. Human oestrogen receptor cDNA: sequence, expression and homology to v-erb-A.
    Nature. 1986 Mar 13-19;320(6058):134-9 PMID: 3754034
  19. Multiple upstream AUG codons mediate translational control of GCN4.
    Cell. 1986 Apr 25;45(2):201-7 PMID: 3516411
  20. The HTS1 gene encodes both the cytoplasmic and mitochondrial histidine tRNA synthetases of S. cerevisiae.
    Cell. 1986 Jul 18;46(2):235-43 PMID: 3521891
  21. Mitochondrial targeting sequences may form amphiphilic helices.
    EMBO J. 1986 Jun;5(6):1335-42 PMID: 3015599
  22. A hierarchy of trans-acting factors modulates translation of an activator of amino acid biosynthetic genes in Saccharomyces cerevisiae.
    Mol Cell Biol. 1985 Sep;5(9):2349-60 PMID: 3915540
  23. Murine erythropoietin gene: cloning, expression, and human gene homology.
    Mol Cell Biol. 1986 Mar;6(3):849-58 PMID: 3773894
  24. Bifunctional messenger RNAs in eukaryotes.
    Cell. 1986 Nov 21;47(4):481-3 PMID: 3779834
  25. The nine amino-terminal residues of delta-aminolevulinate synthase direct beta-galactosidase into the mitochondrial matrix.
    Mol Cell Biol. 1986 Feb;6(2):355-64 PMID: 3023841
  26. Artificial mitochondrial presequences.
    Proc Natl Acad Sci U S A. 1986 Dec;83(23):9011-5 PMID: 3024162
  27. Amino-terminal fragments of delta 1-pyrroline-5-carboxylate dehydrogenase direct beta-galactosidase to the mitochondrial matrix in Saccharomyces cerevisiae.
    Mol Cell Biol. 1986 Oct;6(10):3502-12 PMID: 3025596
  28. Product of Saccharomyces cerevisiae nuclear gene PET494 activates translation of a specific mitochondrial mRNA.
    Mol Cell Biol. 1986 Nov;6(11):3694-703 PMID: 3099165
  29. Multiple GCD genes required for repression of GCN4, a transcriptional activator of amino acid biosynthetic genes in Saccharomyces cerevisiae.
    Mol Cell Biol. 1986 Nov;6(11):3990-8 PMID: 3540603
  30. At least two nuclear gene products are specifically required for translation of a single yeast mitochondrial mRNA.
    EMBO J. 1986 Dec 20;5(13):3637-41 PMID: 3030734
  31. The yeast nuclear gene CBS1 is required for translation of mitochondrial mRNAs bearing the cob 5' untranslated leader.
    Mol Gen Genet. 1987 Jan;206(1):45-50 PMID: 3033440
  32. PET111, a Saccharomyces cerevisiae nuclear gene required for translation of the mitochondrial mRNA encoding cytochrome c oxidase subunit II.
    Genetics. 1987 Apr;115(4):637-47 PMID: 3034718
  33. Two yeast nuclear genes, CBS1 and CBS2, are required for translation of mitochondrial transcripts bearing the 5'-untranslated COB leader.
    Curr Genet. 1986;11(1):41-5 PMID: 3329045
  34. Mitochondrial suppression of a yeast nuclear mutation which affects the translation of the mitochondrial apocytochrome b transcript.
    Curr Genet. 1985;9(8):641-8 PMID: 3916733
  35. Purification of biologically active globin messenger RNA by chromatography on oligothymidylic acid-cellulose.
    Proc Natl Acad Sci U S A. 1972 Jun;69(6):1408-12 PMID: 4504350
  36. Mitochondrial assembly in respiration-deficient mutants of Saccharomyces cerevisiae. II. Effect of nuclear and extrachromosomal mutations on the formation of cytochrome c oxidase.
    J Biol Chem. 1973 Aug 10;248(15):5369-78 PMID: 4358613
  37. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding.
    Anal Biochem. 1976 May 7;72:248-54 PMID: 942051
  38. Analysis of single- and double-stranded nucleic acids on polyacrylamide and agarose gels by using glyoxal and acridine orange.
    Proc Natl Acad Sci U S A. 1977 Nov;74(11):4835-8 PMID: 73185
  39. Identification of the structural gene for yeast cytochrome c oxidase subunit II on mitochondrial DNA.
    J Biol Chem. 1978 Jan 10;253(1):297-304 PMID: 201621
  40. DNA sequencing with chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7 PMID: 271968
  41. Identification of cytochrome c oxidase subunits in nuclear yeast mutants lacking the functional enzyme.
    J Biol Chem. 1978 Jun 25;253(12):4396-401 PMID: 207698
  42. Assembly of the mitochondrial membrane system. DNA sequence of subunit 2 of yeast cytochrome oxidase.
    J Biol Chem. 1979 Sep 25;254(18):9324-30 PMID: 225327
  43. Five TGA "stop" codons occur within the translated sequence of the yeast mitochondrial gene for cytochrome c oxidase subunit II.
    Proc Natl Acad Sci U S A. 1979 Dec;76(12):6534-8 PMID: 230513
  44. Transformation in yeast: development of a hybrid cloning vector and isolation of the CAN1 gene.
    Gene. 1979 Dec;8(1):121-33 PMID: 395029
  45. Mitochondrial membrane biogenesis: identification of a precursor to yeast cytochrome c oxidase subunit II, an integral polypeptide.
    Proc Natl Acad Sci U S A. 1980 Jan;77(1):142-6 PMID: 6244538
  46. Sequencing end-labeled DNA with base-specific chemical cleavages.
    Methods Enzymol. 1980;65(1):499-560 PMID: 6246368
  47. Transcription maps of adenovirus.
    Methods Enzymol. 1980;65(1):750-68 PMID: 6246372
  48. Hybridization of denatured RNA and small DNA fragments transferred to nitrocellulose.
    Proc Natl Acad Sci U S A. 1980 Sep;77(9):5201-5 PMID: 6159641
  49. Identification and cloning of a yeast nuclear gene (CBP1) involved in expression of mitochondrial cytochrome b.
    Proc Natl Acad Sci U S A. 1982 Mar;79(6):1805-9 PMID: 7043464
  50. Import of proteins into mitochondria. Cytochrome b2 and cytochrome c peroxidase are located in the intermembrane space of yeast mitochondria.
    J Biol Chem. 1982 Nov 10;257(21):13028-33 PMID: 6290489
  51. Transformation of intact yeast cells treated with alkali cations.
    J Bacteriol. 1983 Jan;153(1):163-8 PMID: 6336730
  52. Regulation of HIS4-lacZ fusions in Saccharomyces cerevisiae.
    Mol Cell Biol. 1982 Oct;2(10):1212-9 PMID: 6817079
  53. A new pair of M13 vectors for selecting either DNA strand of double-digest restriction fragments.
    Gene. 1982 Oct;19(3):269-76 PMID: 6295880
  54. Analysis of a yeast nuclear gene involved in the maturation of mitochondrial pre-messenger RNA of the cytochrome oxidase subunit I.
    Cell. 1983 Jan;32(1):77-87 PMID: 6297789
  55. How are proteins imported into mitochondria?
    Cell. 1983 Feb;32(2):316-8 PMID: 6297790
  56. Control of yeast cell type by the mating type locus: positive regulation of the alpha-specific STE3 gene by the MAT alpha 1 product.
    Cell. 1983 Feb;32(2):409-15 PMID: 6337727
  57. Evidence for an intron-contained sequence required for the splicing of yeast RNA polymerase II transcripts.
    Cell. 1983 Jun;33(2):519-27 PMID: 6305513
  58. Expression of the "split gene" cob in yeast mtDNA. Nuclear mutations specifically block the excision of different introns from its primary transcript.
    J Biol Chem. 1983 Jul 10;258(13):7954-9 PMID: 6345534
  59. Assembly of the mitochondrial membrane system. Characterization of a yeast nuclear gene involved in the processing of the cytochrome b pre-mRNA.
    J Biol Chem. 1983 Aug 10;258(15):9459-68 PMID: 6348045
  60. Expression of genes in yeast using the ADCI promoter.
    Methods Enzymol. 1983;101:192-201 PMID: 6310322
  61. A nuclear mutation prevents processing of a mitochondrially encoded membrane protein in Saccharomyces cerevisiae.
    EMBO J. 1983;2(7):1049-54 PMID: 6313350
Article Info
Journal
Molecular and cellular biology
Abbr.
Mol Cell Biol
ISSN
0270-7306
Published
1987-08-00
Pages
2728-34
Language
English
Region
United States
NLM ID
8109087
PMCID
PMC367889
Subset
IM
Grants
NIGMS NIH HHS · GM07273 · United States
NIGMS NIH HHS · GM29362 · United States
NICHD NIH HHS · HD00515 · United States
Databases
GENBANK
M17143
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