Abstract
Proteins that are located adjacent to the 5' end of mRNA in initiation complexes have been detected by chemical crosslinking. Reovirus mRNA containing radioactivity exclusively in the [3H]methyl-labeled "cap," m7G(5')ppp(5')-Gm, was oxidized with sodium periodate to convert the 2',3'-cis-diol of the 5'-terminal m7G to a reactive dialdehyde. Oxidized mRNA was incubated in cell-free protein-synthesizing systems derived from wheat germ or mammalian cells, and the resulting mRNA-ribosome initiation complexes were reduced with NaBH3CN. By this chemical procedure, putative Schiff bases between mRNA 5'termini and amino groups of neighboring proteins were stabilized by reduction, yielding covalently linked protein-RNA conjugates. Under conditions of ribosome binding, a limited number of polypeptides associated with the mRNA-ribosome complexes were crosslinked, suggesting that these proteins are positioned near and may interact with the 5' end of mRNA during initiation. This method should also be useful for studying the spatial relationships between molecules in other similar nucleoprotein complexes.
MeSH Terms
Animals
In Vitro Techniques
Oxidation-Reduction
Peptide Initiation Factors/metabolism
Peptides/metabolism
Plant Extracts/metabolism
Protein Binding
RNA, Messenger/metabolism
RNA, Viral/metabolism
Rabbits
Reoviridae/metabolism
Reticulocytes/metabolism
Ribosomes/metabolism
Chemicals
Peptide Initiation Factors
Peptides
Plant Extracts
RNA, Messenger
RNA, Viral
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Sonenberg N
Shatkin A J
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