-
Purification of the cleavage and polyadenylation factor involved in the 3'-processing of messenger RNA precursors.
J Biol Chem. 1991 Oct 15;266(29):19768-76
PMID: 1918081
-
The FIP1 gene encodes a component of a yeast pre-mRNA polyadenylation factor that directly interacts with poly(A) polymerase.
Cell. 1995 May 5;81(3):379-89
PMID: 7736590
-
In silico detection of control signals: mRNA 3'-end-processing sequences in diverse species.
Proc Natl Acad Sci U S A. 1999 Nov 23;96(24):14055-60
PMID: 10570197
-
Influenza virus NS1 protein interacts with the cellular 30 kDa subunit of CPSF and inhibits 3'end formation of cellular pre-mRNAs.
Mol Cell. 1998 Jun;1(7):991-1000
PMID: 9651582
-
CTD-dependent dismantling of the RNA polymerase II elongation complex by the pre-mRNA 3'-end processing factor, Pcf11.
Genes Dev. 2005 Jul 1;19(13):1572-80
PMID: 15998810
-
Locked tether formation by cooperative folding of Rna14p monkeytail and Rna15p hinge domains in the yeast CF IA complex.
Structure. 2011 Apr 13;19(4):534-45
PMID: 21481776
-
Molecular analyses of two poly(A) site-processing factors that determine the recognition and efficiency of cleavage of the pre-mRNA.
Mol Cell Biol. 1991 May;11(5):2432-8
PMID: 2017162
-
Functional interaction of BRCA1-associated BARD1 with polyadenylation factor CstF-50.
Science. 1999 Sep 3;285(5433):1576-9
PMID: 10477523
-
The 30-kD subunit of mammalian cleavage and polyadenylation specificity factor and its yeast homolog are RNA-binding zinc finger proteins.
Genes Dev. 1997 Jul 1;11(13):1703-16
PMID: 9224719
-
Crystal structure of the HEAT domain from the Pre-mRNA processing factor Symplekin.
J Mol Biol. 2009 Sep 11;392(1):115-28
PMID: 19576221
-
A protein of molecular weight 78,000 bound to the polyadenylate region of eukaryotic messenger RNAs.
Proc Natl Acad Sci U S A. 1973 Mar;70(3):924-8
PMID: 4515002
-
Structure of yeast poly(A) polymerase in complex with a peptide from Fip1, an intrinsically disordered protein.
Biochemistry. 2008 Jul 1;47(26):6859-69
PMID: 18537269
-
Crystal structure of the human symplekin-Ssu72-CTD phosphopeptide complex.
Nature. 2010 Oct 7;467(7316):729-33
PMID: 20861839
-
Purification and characterization of human cleavage factor Im involved in the 3' end processing of messenger RNA precursors.
J Biol Chem. 1996 Mar 15;271(11):6107-13
PMID: 8626397
-
Polyadenylation factor CPSF-73 is the pre-mRNA 3'-end-processing endonuclease.
Nature. 2006 Dec 14;444(7121):953-6
PMID: 17128255
-
Transcription factor TFIID recruits factor CPSF for formation of 3' end of mRNA.
Nature. 1997 Sep 25;389(6649):399-402
PMID: 9311784
-
Structural basis for packaging the dimeric genome of Moloney murine leukaemia virus.
Nature. 2004 Sep 30;431(7008):586-90
PMID: 15457265
-
Functional interactions between the transcription and mRNA 3' end processing machineries mediated by Ssu72 and Sub1.
Genes Dev. 2003 Apr 15;17(8):1030-42
PMID: 12704082
-
Structure of a nucleotide-bound Clp1-Pcf11 polyadenylation factor.
Nucleic Acids Res. 2007;35(1):87-99
PMID: 17151076
-
A multisubunit factor, CstF, is required for polyadenylation of mammalian pre-mRNAs.
Genes Dev. 1990 Dec;4(12A):2112-20
PMID: 1980119
-
Structural basis of pre-mRNA recognition by the human cleavage factor Im complex.
Cell Res. 2011 Jul;21(7):1039-51
PMID: 21483454
-
Emerging Views on the CTD Code.
Genet Res Int. 2012;2012:347214
PMID: 22567385
-
Ending the message: poly(A) signals then and now.
Genes Dev. 2011 Sep 1;25(17):1770-82
PMID: 21896654
-
The τCstF-64 polyadenylation protein controls genome expression in testis.
PLoS One. 2012;7(10):e48373
PMID: 23110235
-
Crystal structure of a dimeric archaeal cleavage and polyadenylation specificity factor.
J Struct Biol. 2011 Jan;173(1):191-5
PMID: 20851187
-
Stimulation of poly(A) polymerase through a direct interaction with the nuclear poly(A) binding protein allosterically regulated by RNA.
EMBO J. 2003 Jul 15;22(14):3705-14
PMID: 12853485
-
The 160-kD subunit of human cleavage-polyadenylation specificity factor coordinates pre-mRNA 3'-end formation.
Genes Dev. 1995 Nov 1;9(21):2672-83
PMID: 7590244
-
PCF11 encodes a third protein component of yeast cleavage and polyadenylation factor I.
Mol Cell Biol. 1997 Mar;17(3):1102-9
PMID: 9032237
-
The role of the yeast cleavage and polyadenylation factor subunit Ydh1p/Cft2p in pre-mRNA 3'-end formation.
Nucleic Acids Res. 2003 Jul 15;31(14):3936-45
PMID: 12853609
-
The consensus sequence YGTGTTYY located downstream from the AATAAA signal is required for efficient formation of mRNA 3' termini.
Nucleic Acids Res. 1985 Feb 25;13(4):1347-68
PMID: 2987822
-
RNA polymerase II is an essential mRNA polyadenylation factor.
Nature. 1998 Sep 3;395(6697):93-6
PMID: 9738505
-
Point mutations in AAUAAA and the poly (A) addition site: effects on the accuracy and efficiency of cleavage and polyadenylation in vitro.
Nucleic Acids Res. 1990 Oct 11;18(19):5799-805
PMID: 2170946
-
Flexibility and interchangeability of polyadenylation signals in Saccharomyces cerevisiae.
Mol Cell Biol. 1994 Jul;14(7):4633-42
PMID: 7911972
-
Five subunits are required for reconstitution of the cleavage and polyadenylation activities of Saccharomyces cerevisiae cleavage factor I.
Proc Natl Acad Sci U S A. 2001 May 22;98(11):6080-5
PMID: 11344258
-
3'-end-forming signals of yeast mRNA.
Mol Cell Biol. 1995 Nov;15(11):5983-90
PMID: 7565751
-
A flexible linker region in Fip1 is needed for efficient mRNA polyadenylation.
RNA. 2011 Apr;17(4):652-64
PMID: 21282348
-
Genome-wide analysis of pre-mRNA 3' end processing reveals a decisive role of human cleavage factor I in the regulation of 3' UTR length.
Cell Rep. 2012 Jun 28;1(6):753-63
PMID: 22813749
-
Polyadenylate polymerases.
Methods Enzymol. 1990;181:161-70
PMID: 2166211
-
Rna15 interaction with the A-rich yeast polyadenylation signal is an essential step in mRNA 3'-end formation.
Mol Cell Biol. 2001 Dec;21(23):8045-55
PMID: 11689695
-
Conformation of the RNA polymerase II C-terminal domain: circular dichroism of long and short fragments.
J Mol Biol. 2000 Mar 17;297(1):119-33
PMID: 10704311
-
Chimeric human CstF-77/Drosophila Suppressor of forked proteins rescue suppressor of forked mutant lethality and mRNA 3' end processing in Drosophila.
Proc Natl Acad Sci U S A. 2002 Aug 6;99(16):10593-8
PMID: 12149458
-
Poly(A) tail length control is caused by termination of processive synthesis.
J Biol Chem. 1995 Feb 10;270(6):2800-8
PMID: 7852352
-
Crystal structure of mammalian poly(A) polymerase in complex with an analog of ATP.
EMBO J. 2000 Aug 15;19(16):4193-203
PMID: 10944102
-
Pta1, a component of yeast CF II, is required for both cleavage and poly(A) addition of mRNA precursor.
Mol Cell Biol. 1999 Nov;19(11):7733-40
PMID: 10523662
-
Cleavage factor II of Saccharomyces cerevisiae contains homologues to subunits of the mammalian Cleavage/ polyadenylation specificity factor and exhibits sequence-specific, ATP-dependent interaction with precursor RNA.
J Biol Chem. 1997 Apr 18;272(16):10831-8
PMID: 9099738
-
Structure of the Rna15 RRM-RNA complex reveals the molecular basis of GU specificity in transcriptional 3'-end processing factors.
Nucleic Acids Res. 2010 May;38(9):3119-32
PMID: 20097654
-
Updating the RNA polymerase CTD code: adding gene-specific layers.
Trends Genet. 2012 Jul;28(7):333-41
PMID: 22622228
-
Human Pcf11 enhances degradation of RNA polymerase II-associated nascent RNA and transcriptional termination.
Nucleic Acids Res. 2008 Feb;36(3):905-14
PMID: 18086705
-
The BARD1-CstF-50 interaction links mRNA 3' end formation to DNA damage and tumor suppression.
Cell. 2001 Mar 9;104(5):743-53
PMID: 11257228
-
Complex protein interactions within the human polyadenylation machinery identify a novel component.
Mol Cell Biol. 2000 Mar;20(5):1515-25
PMID: 10669729
-
Structural basis of UGUA recognition by the Nudix protein CFI(m)25 and implications for a regulatory role in mRNA 3' processing.
Proc Natl Acad Sci U S A. 2010 Jun 1;107(22):10062-7
PMID: 20479262
-
Distantly related sequences in the alpha- and beta-subunits of ATP synthase, myosin, kinases and other ATP-requiring enzymes and a common nucleotide binding fold.
EMBO J. 1982;1(8):945-51
PMID: 6329717
-
Conserved motifs in both CPSF73 and CPSF100 are required to assemble the active endonuclease for histone mRNA 3'-end maturation.
EMBO Rep. 2008 Oct;9(10):1013-8
PMID: 18688255
-
Four factors are required for 3'-end cleavage of pre-mRNAs.
Genes Dev. 1989 Nov;3(11):1711-24
PMID: 2558045
-
Distinct roles of two Yth1p domains in 3'-end cleavage and polyadenylation of yeast pre-mRNAs.
EMBO J. 2000 Jul 17;19(14):3778-87
PMID: 10899131
-
Primary structure and expression of bovine poly(A) polymerase.
Nature. 1991 Sep 19;353(6341):229-34
PMID: 1896071
-
The major yeast poly(A)-binding protein is associated with cleavage factor IA and functions in premessenger RNA 3'-end formation.
Proc Natl Acad Sci U S A. 1997 Jul 22;94(15):7897-902
PMID: 9223284
-
Crystal structure of murine CstF-77: dimeric association and implications for polyadenylation of mRNA precursors.
Mol Cell. 2007 Mar 23;25(6):863-75
PMID: 17386263
-
Progressive lengthening of 3' untranslated regions of mRNAs by alternative polyadenylation during mouse embryonic development.
Proc Natl Acad Sci U S A. 2009 Apr 28;106(17):7028-33
PMID: 19372383
-
Characterization of cleavage and polyadenylation specificity factor and cloning of its 100-kilodalton subunit.
Mol Cell Biol. 1994 Dec;14(12):8183-90
PMID: 7969155
-
Formation of mRNA 3' ends in eukaryotes: mechanism, regulation, and interrelationships with other steps in mRNA synthesis.
Microbiol Mol Biol Rev. 1999 Jun;63(2):405-45
PMID: 10357856
-
Recognition of RNA polymerase II carboxy-terminal domain by 3'-RNA-processing factors.
Nature. 2004 Jul 8;430(6996):223-6
PMID: 15241417
-
Bioinformatic identification of candidate cis-regulatory elements involved in human mRNA polyadenylation.
RNA. 2005 Oct;11(10):1485-93
PMID: 16131587
-
Patterns of variant polyadenylation signal usage in human genes.
Genome Res. 2000 Jul;10(7):1001-10
PMID: 10899149
-
Reconstitution of CF IA from overexpressed subunits reveals stoichiometry and provides insights into molecular topology.
Biochemistry. 2011 Nov 29;50(47):10203-14
PMID: 22026644
-
X-ray crystallographic and steady state fluorescence characterization of the protein dynamics of yeast polyadenylate polymerase.
J Mol Biol. 2007 Mar 9;366(5):1401-15
PMID: 17223131
-
A core complex of CPSF73, CPSF100, and Symplekin may form two different cleavage factors for processing of poly(A) and histone mRNAs.
Mol Cell. 2009 May 15;34(3):322-32
PMID: 19450530
-
Comparison of ARM and HEAT protein repeats.
J Mol Biol. 2001 May 25;309(1):1-18
PMID: 11491282
-
Recognition of GU-rich polyadenylation regulatory elements by human CstF-64 protein.
EMBO J. 2003 Jun 2;22(11):2821-30
PMID: 12773396
-
Functional interaction of yeast pre-mRNA 3' end processing factors with RNA polymerase II.
Mol Cell. 2002 May;9(5):1101-11
PMID: 12049745
-
Overlapping and distinct functions of CstF64 and CstF64τ in mammalian mRNA 3' processing.
RNA. 2013 Dec;19(12):1781-90
PMID: 24149845
-
Structural basis for suppression of a host antiviral response by influenza A virus.
Proc Natl Acad Sci U S A. 2008 Sep 2;105(35):13093-8
PMID: 18725644
-
Mutational analysis of mammalian poly(A) polymerase identifies a region for primer binding and catalytic domain, homologous to the family X polymerases, and to other nucleotidyltransferases.
EMBO J. 1996 May 15;15(10):2593-603
PMID: 8665867
-
Mechanism and regulation of mRNA polyadenylation.
Genes Dev. 1997 Nov 1;11(21):2755-66
PMID: 9353246
-
RNA polymerase II CTD phosphopeptides compete with RNA for the interaction with Pcf11.
RNA. 2006 Apr;12(4):555-60
PMID: 16497660
-
Yhh1p/Cft1p directly links poly(A) site recognition and RNA polymerase II transcription termination.
EMBO J. 2002 Aug 1;21(15):4125-35
PMID: 12145212
-
The crystal structure of human cleavage and polyadenylation specific factor-5 reveals a dimeric Nudix protein with a conserved catalytic site.
Proteins. 2008 Dec;73(4):1047-52
PMID: 18767156
-
Hexameric architecture of CstF supported by CstF-50 homodimerization domain structure.
RNA. 2011 Mar;17(3):412-8
PMID: 21233223
-
mRNA 3' end processing and more--multiple functions of mammalian cleavage factor I-68.
Wiley Interdiscip Rev RNA. 2011 Jan-Feb;2(1):79-91
PMID: 21956970
-
Key features of the interaction between Pcf11 CID and RNA polymerase II CTD.
Nat Struct Mol Biol. 2005 Feb;12(2):144-51
PMID: 15665873
-
A mechanism for the regulation of pre-mRNA 3' processing by human cleavage factor Im.
Mol Cell. 2003 Dec;12(6):1467-76
PMID: 14690600
-
Cleavage/polyadenylation factor IA associates with the carboxyl-terminal domain of RNA polymerase II in Saccharomyces cerevisiae.
Proc Natl Acad Sci U S A. 2001 Jan 16;98(2):445-50
PMID: 11149954
-
Structural and biochemical analysis of the assembly and function of the yeast pre-mRNA 3' end processing complex CF I.
Proc Natl Acad Sci U S A. 2012 Dec 26;109(52):21342-7
PMID: 23236150
-
The Role of the poly(A) sequence in mammalian messenger RNA.
CRC Crit Rev Biochem. 1981;10(1):1-38
PMID: 6111419
-
Symplekin, a novel type of tight junction plaque protein.
J Cell Biol. 1996 Aug;134(4):1003-18
PMID: 8769423
-
Fip1 regulates the activity of Poly(A) polymerase through multiple interactions.
Mol Cell Biol. 2001 Mar;21(6):2026-37
PMID: 11238938
-
An interaction between U2AF 65 and CF I(m) links the splicing and 3' end processing machineries.
EMBO J. 2006 Oct 18;25(20):4854-64
PMID: 17024186
-
A multisubunit 3' end processing factor from yeast containing poly(A) polymerase and homologues of the subunits of mammalian cleavage and polyadenylation specificity factor.
EMBO J. 1997 Aug 1;16(15):4727-37
PMID: 9303317
-
PSI-BLAST searches using hidden markov models of structural repeats: prediction of an unusual sliding DNA clamp and of beta-propellers in UV-damaged DNA-binding protein.
Nucleic Acids Res. 2000 Sep 15;28(18):3570-80
PMID: 10982878
-
The CTD code of RNA polymerase II: a structural view.
Wiley Interdiscip Rev RNA. 2013 Jan-Feb;4(1):1-16
PMID: 23042580
-
Dynamic phosphorylation patterns of RNA polymerase II CTD during transcription.
Biochim Biophys Acta. 2013 Jan;1829(1):55-62
PMID: 22982363
-
Assembly of a processive messenger RNA polyadenylation complex.
EMBO J. 1993 Feb;12(2):585-94
PMID: 8440247
-
An Arabidopsis Fip1 homolog interacts with RNA and provides conceptual links with a number of other polyadenylation factor subunits.
J Biol Chem. 2006 Jan 6;281(1):176-86
PMID: 16282318
-
The hinge domain of the cleavage stimulation factor protein CstF-64 is essential for CstF-77 interaction, nuclear localization, and polyadenylation.
J Biol Chem. 2010 Jan 1;285(1):695-704
PMID: 19887456
-
Protein factors in pre-mRNA 3'-end processing.
Cell Mol Life Sci. 2008 Apr;65(7-8):1099-122
PMID: 18158581
-
Isolation of genomic and cDNA clones encoding bovine poly(A) binding protein II.
Nucleic Acids Res. 1995 Oct 25;23(20):4034-41
PMID: 7479061
-
WD40 proteins propel cellular networks.
Trends Biochem Sci. 2010 Oct;35(10):565-74
PMID: 20451393
-
novel modifications on C-terminal domain of RNA polymerase II can fine-tune the phosphatase activity of Ssu72.
ACS Chem Biol. 2013 Sep 20;8(9):2042-52
PMID: 23844594
-
An essential role for Clp1 in assembly of polyadenylation complex CF IA and Pol II transcription termination.
Nucleic Acids Res. 2012 Feb;40(3):1226-39
PMID: 21993300
-
A human polyadenylation factor is a G protein beta-subunit homologue.
J Biol Chem. 1992 Nov 25;267(33):23471-4
PMID: 1358884
-
cis-Proline-mediated Ser(P)5 dephosphorylation by the RNA polymerase II C-terminal domain phosphatase Ssu72.
J Biol Chem. 2011 Feb 18;286(7):5717-26
PMID: 21159777
-
The HAT helix, a repetitive motif implicated in RNA processing.
Trends Biochem Sci. 1998 Jan;23(1):15-6
PMID: 9478129
-
Molecular architecture and assembly of the DDB1-CUL4A ubiquitin ligase machinery.
Nature. 2006 Oct 5;443(7111):590-3
PMID: 16964240
-
Interactions of CstF-64, CstF-77, and symplekin: implications on localisation and function.
Mol Biol Cell. 2011 Jan 1;22(1):91-104
PMID: 21119002
-
Heterogeneity in polyadenylation cleavage sites in mammalian mRNA sequences: implications for SAGE analysis.
Nucleic Acids Res. 2001 Apr 15;29(8):1690-4
PMID: 11292841
-
Structural biology of poly(A) site definition.
Wiley Interdiscip Rev RNA. 2011 Sep-Oct;2(5):732-47
PMID: 21823232
-
An ordered pathway of assembly of components required for polyadenylation site recognition and processing.
Genes Dev. 1989 Dec;3(12B):2180-90
PMID: 2628166
-
Pre-mRNA processing reaches back to transcription and ahead to translation.
Cell. 2009 Feb 20;136(4):688-700
PMID: 19239889
-
Structure of yeast poly(A) polymerase alone and in complex with 3'-dATP.
Science. 2000 Aug 25;289(5483):1346-9
PMID: 10958780
-
Symplekin, a constitutive protein of karyo- and cytoplasmic particles involved in mRNA biogenesis in Xenopus laevis oocytes.
Mol Biol Cell. 2002 May;13(5):1665-76
PMID: 12006661
-
Biochemical and structural insights into substrate binding and catalytic mechanism of mammalian poly(A) polymerase.
J Mol Biol. 2004 Aug 20;341(4):911-25
PMID: 15328606
-
A polyadenylation factor subunit is the human homologue of the Drosophila suppressor of forked protein.
Nature. 1994 Dec 1;372(6505):471-4
PMID: 7984242
-
The C-terminal domains of vertebrate CstF-64 and its yeast orthologue Rna15 form a new structure critical for mRNA 3'-end processing.
J Biol Chem. 2007 Jan 19;282(3):2101-15
PMID: 17116658
-
Structure and function of poly(A) binding proteins.
Biochim Biophys Acta. 2004 May 25;1678(2-3):67-84
PMID: 15157733
-
A novel poly(A)-binding protein acts as a specificity factor in the second phase of messenger RNA polyadenylation.
Cell. 1991 Aug 23;66(4):759-68
PMID: 1878970
-
The RNA binding domains of the nuclear poly(A)-binding protein.
J Biol Chem. 2003 May 9;278(19):16916-25
PMID: 12637556
-
The WD-repeat protein pfs2p bridges two essential factors within the yeast pre-mRNA 3'-end-processing complex.
EMBO J. 2000 Jan 4;19(1):37-47
PMID: 10619842
-
3' end mRNA processing: molecular mechanisms and implications for health and disease.
EMBO J. 2008 Feb 6;27(3):482-98
PMID: 18256699
-
The Nudix hydrolase superfamily.
Cell Mol Life Sci. 2006 Jan;63(2):123-43
PMID: 16378245
-
Definition of essential sequences and functional equivalence of elements downstream of the adenovirus E2A and the early simian virus 40 polyadenylation sites.
Mol Cell Biol. 1985 Nov;5(11):2975-83
PMID: 3018490
-
The poly(A)-dependent transcriptional pause is mediated by CPSF acting on the body of the polymerase.
Nat Struct Mol Biol. 2007 Jul;14(7):662-9
PMID: 17572685
-
The C-terminal domain of RNA polymerase II couples mRNA processing to transcription.
Nature. 1997 Jan 23;385(6614):357-61
PMID: 9002523
-
The Saccharomyces cerevisiae RNA-binding protein Rbp29 functions in cytoplasmic mRNA metabolism.
J Biol Chem. 2000 Jul 21;275(29):21817-26
PMID: 10764794
-
Sumoylation regulates multiple aspects of mammalian poly(A) polymerase function.
Genes Dev. 2008 Feb 15;22(4):499-511
PMID: 18281463
-
The poly(A)-binding protein nuclear 1 suppresses alternative cleavage and polyadenylation sites.
Cell. 2012 Apr 27;149(3):538-53
PMID: 22502866
-
Alternative cleavage and polyadenylation: the long and short of it.
Trends Biochem Sci. 2013 Jun;38(6):312-20
PMID: 23632313
-
Evidence that polyadenylation factor CPSF-73 is the mRNA 3' processing endonuclease.
RNA. 2004 Apr;10(4):565-73
PMID: 15037765
-
Sequence and position requirements for uridylate-rich downstream elements of polyadenylation signals.
Nucleic Acids Res. 1994 Jul 11;22(13):2525-31
PMID: 7518915
-
A CPSF-73 homologue is required for cell cycle progression but not cell growth and interacts with a protein having features of CPSF-100.
Mol Cell Biol. 2005 Feb;25(4):1489-500
PMID: 15684398
-
Cell-cycle related regulation of poly(A) polymerase by phosphorylation.
Nature. 1996 Nov 21;384(6606):282-5
PMID: 8918882
-
Inactivation of the pre-mRNA cleavage and polyadenylation factor Pfs2 in fission yeast causes lethal cell cycle defects.
Mol Cell Biol. 2005 Mar;25(6):2288-96
PMID: 15743824
-
Evolutionarily conserved interaction between CstF-64 and PC4 links transcription, polyadenylation, and termination.
Mol Cell. 2001 May;7(5):1013-23
PMID: 11389848
-
Recognition of the mRNA AU-rich element by the zinc finger domain of TIS11d.
Nat Struct Mol Biol. 2004 Mar;11(3):257-64
PMID: 14981510
-
Functional dissection of the zinc finger and flanking domains of the Yth1 cleavage/polyadenylation factor.
Nucleic Acids Res. 2003 Mar 15;31(6):1744-52
PMID: 12626716
-
Crystal structure of a human cleavage factor CFI(m)25/CFI(m)68/RNA complex provides an insight into poly(A) site recognition and RNA looping.
Structure. 2011 Mar 9;19(3):368-77
PMID: 21295486
-
Metabolism and regulation of canonical histone mRNAs: life without a poly(A) tail.
Nat Rev Genet. 2008 Nov;9(11):843-54
PMID: 18927579
-
The essential N terminus of the Pta1 scaffold protein is required for snoRNA transcription termination and Ssu72 function but is dispensable for pre-mRNA 3'-end processing.
Mol Cell Biol. 2009 Apr;29(8):2296-307
PMID: 19188448
-
Cloning and expression of the essential gene for poly(A) polymerase from S. cerevisiae.
Nature. 1991 Dec 12;354(6353):496-8
PMID: 1840648
-
Characterization of the multisubunit cleavage-polyadenylation specificity factor from calf thymus.
J Biol Chem. 1992 Jul 25;267(21):14804-11
PMID: 1634525
-
Structural basis of UV DNA-damage recognition by the DDB1-DDB2 complex.
Cell. 2008 Dec 26;135(7):1213-23
PMID: 19109893
-
Crystal structure of the 25 kDa subunit of human cleavage factor Im.
Nucleic Acids Res. 2008 Jun;36(10):3474-83
PMID: 18445629
-
A multicomponent complex is required for the AAUAAA-dependent cross-linking of a 64-kilodalton protein to polyadenylation substrates.
Mol Cell Biol. 1990 Mar;10(3):1244-8
PMID: 2304466
-
Pre-mRNA 3'-end processing complex assembly and function.
Wiley Interdiscip Rev RNA. 2011 May-Jun;2(3):321-35
PMID: 21957020
-
RNA recognition by the human polyadenylation factor CstF.
Mol Cell Biol. 1997 Jul;17(7):3907-14
PMID: 9199325
-
Kin28, the TFIIH-associated carboxy-terminal domain kinase, facilitates the recruitment of mRNA processing machinery to RNA polymerase II.
Mol Cell Biol. 2000 Jan;20(1):104-12
PMID: 10594013
-
Multiple histone deacetylases and the CREB-binding protein regulate pre-mRNA 3'-end processing.
J Biol Chem. 2007 Feb 16;282(7):4470-4478
PMID: 17172643
-
Purification and characterization of a mammalian polyadenylate polymerase involved in the 3' end processing of messenger RNA precursors.
J Biol Chem. 1991 Feb 15;266(5):3131-9
PMID: 1993684
-
Novel protein-protein contacts facilitate mRNA 3'-processing signal recognition by Rna15 and Hrp1.
J Mol Biol. 2010 Aug 20;401(3):334-49
PMID: 20600122
-
Updating the CTD Story: From Tail to Epic.
Genet Res Int. 2011;2011:623718
PMID: 22567360
-
Independent functions of yeast Pcf11p in pre-mRNA 3' end processing and in transcription termination.
EMBO J. 2003 May 1;22(9):2167-77
PMID: 12727883
-
Human Fip1 is a subunit of CPSF that binds to U-rich RNA elements and stimulates poly(A) polymerase.
EMBO J. 2004 Feb 11;23(3):616-26
PMID: 14749727
-
Crystal structure of an archaeal cleavage and polyadenylation specificity factor subunit from Pyrococcus horikoshii.
Proteins. 2010 Aug 1;78(10):2395-8
PMID: 20544974
-
Crystal structure and possible dimerization of the single RRM of human PABPN1.
Proteins. 2008 May 15;71(3):1539-45
PMID: 18275081
-
Widespread shortening of 3'UTRs by alternative cleavage and polyadenylation activates oncogenes in cancer cells.
Cell. 2009 Aug 21;138(4):673-84
PMID: 19703394
-
Distinct sequence motifs within the 68-kDa subunit of cleavage factor Im mediate RNA binding, protein-protein interactions, and subcellular localization.
J Biol Chem. 2004 Aug 20;279(34):35788-97
PMID: 15169763
-
Molecular architecture of the human pre-mRNA 3' processing complex.
Mol Cell. 2009 Feb 13;33(3):365-76
PMID: 19217410
-
The hunt for the 3' endonuclease.
Wiley Interdiscip Rev RNA. 2010 Sep-Oct;1(2):325-40
PMID: 21935893
-
The P-loop domain of yeast Clp1 mediates interactions between CF IA and CPF factors in pre-mRNA 3' end formation.
PLoS One. 2011;6(12):e29139
PMID: 22216186
-
Structure and activity of a novel archaeal β-CASP protein with N-terminal KH domains.
Structure. 2011 May 11;19(5):622-32
PMID: 21565697
-
The nuclear poly(A) binding protein, PABP2, forms an oligomeric particle covering the length of the poly(A) tail.
J Mol Biol. 2000 Mar 31;297(3):569-83
PMID: 10731412
-
The 64-kilodalton subunit of the CstF polyadenylation factor binds to pre-mRNAs downstream of the cleavage site and influences cleavage site location.
Mol Cell Biol. 1994 Oct;14(10):6647-54
PMID: 7935383
-
The role of the Brr5/Ysh1 C-terminal domain and its homolog Syc1 in mRNA 3'-end processing in Saccharomyces cerevisiae.
RNA. 2006 Mar;12(3):435-45
PMID: 16431986
-
Poly(A) tail length is controlled by the nuclear poly(A)-binding protein regulating the interaction between poly(A) polymerase and the cleavage and polyadenylation specificity factor.
J Biol Chem. 2009 Aug 21;284(34):22803-14
PMID: 19509282
-
The structure of the CstF-77 homodimer provides insights into CstF assembly.
Nucleic Acids Res. 2007;35(13):4515-22
PMID: 17584787
-
Metallo-beta-lactamase fold within nucleic acids processing enzymes: the beta-CASP family.
Nucleic Acids Res. 2002 Aug 15;30(16):3592-601
PMID: 12177301
-
Recognition of polyadenylation sites in yeast pre-mRNAs by cleavage and polyadenylation factor.
EMBO J. 2001 Jun 15;20(12):3197-209
PMID: 11406596
-
Extended disordered proteins: targeting function with less scaffold.
Trends Biochem Sci. 2003 Feb;28(2):81-5
PMID: 12575995
-
Crystal structure of the Rna14-Rna15 complex.
RNA. 2012 Jun;18(6):1154-62
PMID: 22513198
-
Position-dependent sequence elements downstream of AAUAAA are required for efficient rabbit beta-globin mRNA 3' end formation.
Cell. 1987 May 8;49(3):399-406
PMID: 3568131
-
Human RNA 5'-kinase (hClp1) can function as a tRNA splicing enzyme in vivo.
RNA. 2008 Sep;14(9):1737-45
PMID: 18648070
-
Structural basis of transcription: RNA polymerase II at 2.8 angstrom resolution.
Science. 2001 Jun 8;292(5523):1863-76
PMID: 11313498
-
Rna14-Rna15 assembly mediates the RNA-binding capability of Saccharomyces cerevisiae cleavage factor IA.
Nucleic Acids Res. 2004 Jun 23;32(11):3364-75
PMID: 15215336
-
The RNA polymerase II CTD coordinates transcription and RNA processing.
Genes Dev. 2012 Oct 1;26(19):2119-37
PMID: 23028141
-
Nucleases of the metallo-beta-lactamase family and their role in DNA and RNA metabolism.
Crit Rev Biochem Mol Biol. 2007 Mar-Apr;42(2):67-93
PMID: 17453916
-
Association of polyadenylation cleavage factor I with U1 snRNP.
RNA. 2003 Nov;9(11):1400-9
PMID: 14561889
-
Human pre-mRNA cleavage factor Im is related to spliceosomal SR proteins and can be reconstituted in vitro from recombinant subunits.
Mol Cell. 1998 Jan;1(2):243-53
PMID: 9659921
-
Accurate cleavage and polyadenylation of exogenous RNA substrate.
Cell. 1985 Jul;41(3):845-55
PMID: 2408761
-
Structural insights into the dual activity of RNase J.
Nat Struct Mol Biol. 2008 Feb;15(2):206-12
PMID: 18204464
-
Mechanism of poly(A) polymerase: structure of the enzyme-MgATP-RNA ternary complex and kinetic analysis.
Structure. 2007 Sep;15(9):1117-31
PMID: 17850751
-
Human pre-mRNA cleavage factor II(m) contains homologs of yeast proteins and bridges two other cleavage factors.
EMBO J. 2000 Nov 1;19(21):5895-904
PMID: 11060040
-
The interaction of Pcf11 and Clp1 is needed for mRNA 3'-end formation and is modulated by amino acids in the ATP-binding site.
Nucleic Acids Res. 2012 Feb;40(3):1214-25
PMID: 21993299
-
Mechanisms and consequences of alternative polyadenylation.
Mol Cell. 2011 Sep 16;43(6):853-66
PMID: 21925375
-
PARP1 represses PAP and inhibits polyadenylation during heat shock.
Mol Cell. 2013 Jan 10;49(1):7-17
PMID: 23219533
-
Knock-down of 25 kDa subunit of cleavage factor Im in Hela cells alters alternative polyadenylation within 3'-UTRs.
Nucleic Acids Res. 2006;34(21):6264-71
PMID: 17098938
-
MEARA sequence repeat of human CstF-64 polyadenylation factor is helical in solution. A spectroscopic and calorimetric study.
Biochemistry. 1999 Sep 28;38(39):12869-75
PMID: 10504257
-
Sequence similarity between the 73-kilodalton protein of mammalian CPSF and a subunit of yeast polyadenylation factor I.
Science. 1996 Nov 29;274(5292):1514-7
PMID: 8929409
-
Two distinct forms of the 64,000 Mr protein of the cleavage stimulation factor are expressed in mouse male germ cells.
Proc Natl Acad Sci U S A. 1999 Jun 8;96(12):6763-8
PMID: 10359786
-
Cleavage and polyadenylation factor CPF specifically interacts with the pre-mRNA 3' processing signal AAUAAA.
EMBO J. 1991 Dec;10(13):4241-9
PMID: 1756731
-
A 64 kd nuclear protein binds to RNA segments that include the AAUAAA polyadenylation motif.
Cell. 1988 Jan 29;52(2):221-8
PMID: 2830023
-
A novel WD40 repeat protein, WDC146, highly expressed during spermatogenesis in a stage-specific manner.
Biochem Biophys Res Commun. 2001 Jan 26;280(3):656-63
PMID: 11162572
-
Analysis of a noncanonical poly(A) site reveals a tripartite mechanism for vertebrate poly(A) site recognition.
Genes Dev. 2005 Jun 1;19(11):1315-27
PMID: 15937220
-
The human 64-kDa polyadenylylation factor contains a ribonucleoprotein-type RNA binding domain and unusual auxiliary motifs.
Proc Natl Acad Sci U S A. 1992 Feb 15;89(4):1403-7
PMID: 1741396
-
3' cleavage and polyadenylation of mRNA precursors in vitro requires a poly(A) polymerase, a cleavage factor, and a snRNP.
Cell. 1988 Sep 9;54(6):875-89
PMID: 2842067
-
Novel interactions at the essential N-terminus of poly(A) polymerase that could regulate poly(A) addition in Saccharomyces cerevisiae.
FEBS Lett. 2012 Apr 24;586(8):1173-8
PMID: 22575652
-
The human RNA kinase hClp1 is active on 3' transfer RNA exons and short interfering RNAs.
Nature. 2007 May 10;447(7141):222-6
PMID: 17495927
-
Complex alternative RNA processing generates an unexpected diversity of poly(A) polymerase isoforms.
Mol Cell Biol. 1996 May;16(5):2378-86
PMID: 8628305
-
Large-scale proteomic analysis of the human spliceosome.
Genome Res. 2002 Aug;12(8):1231-45
PMID: 12176931
-
The structure of human cleavage factor I(m) hints at functions beyond UGUA-specific RNA binding: a role in alternative polyadenylation and a potential link to 5' capping and splicing.
RNA Biol. 2011 Sep-Oct;8(5):748-53
PMID: 21881408
-
Proliferating cells express mRNAs with shortened 3' untranslated regions and fewer microRNA target sites.
Science. 2008 Jun 20;320(5883):1643-7
PMID: 18566288