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PMID: 12575995 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

Extended disordered proteins: targeting function with less scaffold.

Trends in biochemical sciences ·Vol. 28 ·No. 2 ·2003-02-00 ·Pages 81-5

Gunasekaran K, Tsai CJ, Kumar S, Zanuy D, Nussinov R

Abstract

It has been estimated that a large fraction of cellular proteins are natively disordered. Current opinion largely holds that natively disordered proteins are more 'adaptive', leading to advantages in regulation and in binding diverse ligands. Here, we argue for another, simple, physically based reason. Disordered proteins often have large intermolecular interfaces, the size of which is dictated by protein function. For proteins to be stable as monomers with extensive interfaces, protein size would need to be 2-3 times larger. This would either increase cellular crowding or enlarge the size of the cell by 15-30%, owing to the increase in the sequence length. Smaller sizes of cells, proteins, DNA and RNA conserve energy. Thus, disordered proteins provide a simple yet elegant solution to having large intermolecular interfaces, but with smaller protein, genome and cell sizes.

MeSH Terms
Models, Molecular Protein Conformation Protein Folding Proteins/chemistry,metabolism Structure-Activity Relationship Surface Properties Thermodynamics
Chemicals
Proteins
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Gunasekaran Kannan
Laboratory of Experimental and Computational Biology, NCI- Frederick, MD 21702, USA.
Tsai Chung-Jung
Kumar Sandeep
Zanuy David
Nussinov Ruth
Article Info
Journal
Trends in biochemical sciences
Abbr.
Trends Biochem Sci
ISSN
0968-0004
Published
2003-02-00
Pages
81-5
Language
English
Region
England
NLM ID
7610674
Subset
IM
Grants
NCI NIH HHS · N01-CO-12400 · United States
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