Home LiteratureArticle Details
PMID: 24272627 Published · ppublish English Journal Article

Function of heterologous and pseudo border repeats in T region transfer via the octopine virulence system of Agrobacterium tumefaciens.

Plant molecular biology ·Vol. 11 ·No. 6 ·1988-11-00 ·Pages 773-81

Van Haaren MJ, Sedee NJ, Krul M, Schilperoort RA, Hooykaas PJ

Abstract

The successful transfer of the Ti plasmid T region to the plant cell is mediated by its 24 bp border repeats. Processing of the T-region prior to transfer to the plant cell is started at the right border repeat and is stimulated by a transfer enhancer sequence called "overdrive". Left and right border repeats differ somewhat in nucleotide sequence; moreover, the repeats of different Ti and Ri plasmids are slightly different. Our data indicate that these differences do not have a significant influence on border activity. However, the overdrive sequence is essential for the efficient transfer of a T region via an octopine transfer system. Our data suggest that an overdrive sequence must also be present next to the right border repeats of the nopaline Ti plasmid and the agropine of octopine and nopaline Ti plasmids express some differences in T-DNA processing activities. of cotopine and nopaline Ti plasmids express some differences in T-DNA processing activities.Furthermore, we demonstrate that certain pseudo border repeats, sequences that resemble the native 24 bp border repeat and naturally occur within the octopine Ti plasmid T-region, are able to mediate T region transfer to the plant cell, albeit with much reduced efficiency as compared to wild-type border repeats.

Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Van Haaren M J
Department of Plant Molecular Biology, Biochemistry Laboratory, Leiden University, Wassenaarseweg 64, 2333, AL Leiden, Netherlands.
Sedee N J
Krul M
Schilperoort R A
Hooykaas P J
References (22)
22 references, click to expand
  1. Nucleotide sequence analysis of TL-DNA of Agrobacterium rhizogenes agropine type plasmid. Identification of open reading frames.
    J Biol Chem. 1986 Jan 5;261(1):108-21 PMID: 3001043
  2. A functional map of the replicator region of the octopine Ti plasmid.
    Plasmid. 1982 Mar;7(2):119-32 PMID: 6281832
  3. T-DNA of the Agrobacterium Ti and Ri plasmids.
    Annu Rev Genet. 1982;16:357-84 PMID: 6297376
  4. Right 25 bp terminus sequence of the nopaline T-DNA is essential for and determines direction of DNA transfer from agrobacterium to the plant genome.
    Cell. 1984 Sep;38(2):455-62 PMID: 6467373
  5. Functional analysis of the Agrobacterium tumefaciens octopine Ti-plasmid left and right T-region border fragments.
    Plant Mol Biol. 1987 Jan;8(1):95-104 PMID: 24302528
  6. Overdrive is a T-region transfer enhancer which stimulates T-strand production in Agrobacterium tumefaciens.
    Nucleic Acids Res. 1987 Nov 11;15(21):8983-97 PMID: 3684577
  7. Tumor induction by Agrobacterium tumefaciens: analysis of the boundaries of T-DNA.
    J Mol Appl Genet. 1982;1(4):361-70 PMID: 7108407
  8. Clones from a shooty tobacco crown gall tumor I: deletions, rearrangements and amplifications resulting in irregular T-DNA structures and organizations.
    Plant Mol Biol. 1986 Jul;7(4):265-84 PMID: 24302369
  9. Processing of the T-DNA of Agrobacterium tumefaciens generates border nicks and linear, single-stranded T-DNA.
    J Bacteriol. 1987 Mar;169(3):1046-55 PMID: 3029014
  10. Grown gall plant tumors of abnormal morphology, induced by Agrobacterium tumefaciens carrying mutated octopine Ti plasmids; analysis of T-DNA functions.
    Gene. 1981 Jun-Jul;14(1-2):33-50 PMID: 6266929
  11. Overdrive, a T-DNA transmission enhancer on the A. tumefaciens tumour-inducing plasmid.
    EMBO J. 1986 Jun;5(6):1137-42 PMID: 15966101
  12. Transformed cell clones as a tool to study T-DNA integration mediated by Agrobacterium tumefaciens.
    J Mol Biol. 1986 Mar 20;188(2):129-45 PMID: 3723593
  13. Short direct repeats flank the T-DNA on a nopaline Ti plasmid.
    Proc Natl Acad Sci U S A. 1982 Oct;79(20):6322-6 PMID: 16593241
  14. Interactions between octopine and nopaline plasmids in Agrobacterium tumefaciens.
    J Bacteriol. 1980 Sep;143(3):1295-306 PMID: 7410319
  15. T-DNA rearrangements due to tissue culture: somaclonal variation in crown gall tissues.
    Plant Mol Biol. 1987 Jan;9(1):51-7 PMID: 24276797
  16. The pIC plasmid and phage vectors with versatile cloning sites for recombinant selection by insertional inactivation.
    Gene. 1984 Dec;32(3):481-5 PMID: 6099327
  17. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors.
    Gene. 1985;33(1):103-19 PMID: 2985470
  18. Nucleotide sequence of the T-DNA region from theA grobacterium tumefaciens octopine Ti plasmid pTi15955.
    Plant Mol Biol. 1983 Nov;2(6):335-50 PMID: 24318453
  19. Octopine Ti-plasmid deletion mutants of agrobacterium tumefaciens with emphasis on the right side of the T-region.
    Plasmid. 1982 Jan;7(1):15-29 PMID: 6283573
  20. The effect of right terminal repeat deletion on the oncogenicity of the T-Region of pTiT37.
    Plant Mol Biol. 1985 Jan;5(1):3-11 PMID: 24306535
  21. A comparison of virulence determinants in an octopine Ti plasmid, a nopaline Ti plasmid, and an Ri plasmid by complementation analysis of Agrobacterium tumefaciens mutants.
    Plasmid. 1984 May;11(3):195-205 PMID: 6087390
  22. The right border region of pTiT37 T-DNA is intrinsically more active than the left border region in promoting T-DNA transformation.
    Proc Natl Acad Sci U S A. 1986 Jun;83(11):3895-9 PMID: 3459162
Article Info
Journal
Plant molecular biology
Abbr.
Plant Mol Biol
ISSN
0167-4412
Published
1988-11-00
Pages
773-81
Language
English
Region
Netherlands
NLM ID
9106343
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com