-
An HIV feedback resistor: auto-regulatory circuit deactivator and noise buffer.
PLoS Biol. 2007 Jan;5(1):e9
PMID: 17194214
-
Bromodomain analysis of Brd2-dependent transcriptional activation of cyclin A.
Biochem J. 2005 Apr 1;387(Pt 1):257-69
PMID: 15548137
-
Disulfiram reactivates latent HIV-1 in a Bcl-2-transduced primary CD4+ T cell model without inducing global T cell activation.
J Virol. 2011 Jun;85(12):6060-4
PMID: 21471244
-
Evidence that P-TEFb alleviates the negative effect of DSIF on RNA polymerase II-dependent transcription in vitro.
EMBO J. 1998 Dec 15;17(24):7395-403
PMID: 9857195
-
The bromodomain protein Brd4 is a positive regulatory component of P-TEFb and stimulates RNA polymerase II-dependent transcription.
Mol Cell. 2005 Aug 19;19(4):523-34
PMID: 16109376
-
Prostratin antagonizes HIV latency by activating NF-kappaB.
J Biol Chem. 2004 Oct 1;279(40):42008-17
PMID: 15284245
-
Down-regulation of NF-κB transcriptional activity in HIV-associated kidney disease by BRD4 inhibition.
J Biol Chem. 2012 Aug 17;287(34):28840-51
PMID: 22645123
-
Stochasticity in transcriptional regulation: origins, consequences, and mathematical representations.
Biophys J. 2001 Dec;81(6):3116-36
PMID: 11720979
-
Association of the Mediator complex with enhancers of active genes.
Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):13887-91
PMID: 14623974
-
BET domain co-regulators in obesity, inflammation and cancer.
Nat Rev Cancer. 2012 Jun 22;12(7):465-77
PMID: 22722403
-
BET bromodomain inhibition as a novel strategy for reactivation of HIV-1.
J Leukoc Biol. 2012 Dec;92(6):1147-54
PMID: 22802445
-
A role for the MLL fusion partner ENL in transcriptional elongation and chromatin modification.
Blood. 2007 Dec 15;110(13):4445-54
PMID: 17855633
-
Recruitment of P-TEFb for stimulation of transcriptional elongation by the bromodomain protein Brd4.
Mol Cell. 2005 Aug 19;19(4):535-45
PMID: 16109377
-
Acetylation of cyclin T1 regulates the equilibrium between active and inactive P-TEFb in cells.
EMBO J. 2009 May 20;28(10):1407-17
PMID: 19387490
-
Transcriptional synergy between Tat and PCAF is dependent on the binding of acetylated Tat to the PCAF bromodomain.
EMBO J. 2002 Jun 3;21(11):2715-23
PMID: 12032084
-
Reactivation of latent HIV-1 by inhibition of BRD4.
Cell Rep. 2012 Oct 25;2(4):807-16
PMID: 23041316
-
Suberoylanilide hydroxamic acid reactivates HIV from latently infected cells.
J Biol Chem. 2009 Mar 13;284(11):6782-9
PMID: 19136668
-
NELF, a multisubunit complex containing RD, cooperates with DSIF to repress RNA polymerase II elongation.
Cell. 1999 Apr 2;97(1):41-51
PMID: 10199401
-
Stimulation of HIV-1-specific cytolytic T lymphocytes facilitates elimination of latent viral reservoir after virus reactivation.
Immunity. 2012 Mar 23;36(3):491-501
PMID: 22406268
-
A novel CDK9-associated C-type cyclin interacts directly with HIV-1 Tat and mediates its high-affinity, loop-specific binding to TAR RNA.
Cell. 1998 Feb 20;92(4):451-62
PMID: 9491887
-
Inhibition of BET recruitment to chromatin as an effective treatment for MLL-fusion leukaemia.
Nature. 2011 Oct 02;478(7370):529-33
PMID: 21964340
-
Limits on replenishment of the resting CD4+ T cell reservoir for HIV in patients on HAART.
PLoS Pathog. 2007 Aug 31;3(8):e122
PMID: 17784786
-
Direct and quantitative single-cell analysis of human immunodeficiency virus type 1 reactivation from latency.
J Virol. 2002 Sep;76(17):8776-86
PMID: 12163598
-
Short communication: activation of latent HIV type 1 gene expression by suberoylanilide hydroxamic acid (SAHA), an HDAC inhibitor approved for use to treat cutaneous T cell lymphoma.
AIDS Res Hum Retroviruses. 2009 Sep;25(9):883-7
PMID: 19689202
-
Stochastic gene expression in a lentiviral positive-feedback loop: HIV-1 Tat fluctuations drive phenotypic diversity.
Cell. 2005 Jul 29;122(2):169-82
PMID: 16051143
-
Brd2 is a TBP-associated protein and recruits TBP into E2F-1 transcriptional complex in response to serum stimulation.
Mol Cell Biochem. 2007 Jan;294(1-2):45-54
PMID: 17111193
-
Hide-and-seek: the challenge of viral persistence in HIV-1 infection.
Annu Rev Med. 2008;59:487-501
PMID: 17845138
-
HIV reproducibly establishes a latent infection after acute infection of T cells in vitro.
EMBO J. 2003 Apr 15;22(8):1868-77
PMID: 12682019
-
P-TEFb, a cyclin-dependent kinase controlling elongation by RNA polymerase II.
Mol Cell Biol. 2000 Apr;20(8):2629-34
PMID: 10733565
-
Cytokine-induced expression of HIV-1 in a chronically infected promonocyte cell line.
Science. 1987 Nov 6;238(4828):800-2
PMID: 3313729
-
Transcriptional bursting from the HIV-1 promoter is a significant source of stochastic noise in HIV-1 gene expression.
Biophys J. 2010 Apr 21;98(8):L32-4
PMID: 20409455
-
Mammalian mediator of transcriptional regulation and its possible role as an end-point of signal transduction pathways.
Proc Natl Acad Sci U S A. 1998 Jul 21;95(15):8538-43
PMID: 9671713
-
Structural basis of lysine-acetylated HIV-1 Tat recognition by PCAF bromodomain.
Mol Cell. 2002 Mar;9(3):575-86
PMID: 11931765
-
Controlling the elongation phase of transcription with P-TEFb.
Mol Cell. 2006 Aug 4;23(3):297-305
PMID: 16885020
-
The BET bromodomain inhibitor JQ1 activates HIV latency through antagonizing Brd4 inhibition of Tat-transactivation.
Nucleic Acids Res. 2013 Jan 7;41(1):277-87
PMID: 23087374
-
Transcriptional burst frequency and burst size are equally modulated across the human genome.
Proc Natl Acad Sci U S A. 2012 Oct 23;109(43):17454-9
PMID: 23064634
-
Acetylation of Tat defines a cyclinT1-independent step in HIV transactivation.
Mol Cell. 2003 Jul;12(1):167-76
PMID: 12887902
-
In vivo gene delivery and stable transduction of nondividing cells by a lentiviral vector.
Science. 1996 Apr 12;272(5259):263-7
PMID: 8602510
-
Studies of HIV-1 latency in an ex vivo model that uses primary central memory T cells.
Methods. 2011 Jan;53(1):54-61
PMID: 20970502
-
Gene network shaping of inherent noise spectra.
Nature. 2006 Feb 2;439(7076):608-11
PMID: 16452980
-
Synergistic activation of human immunodeficiency virus type 1 promoter activity by NF-kappaB and inhibitors of deacetylases: potential perspectives for the development of therapeutic strategies.
J Virol. 2002 Nov;76(21):11091-103
PMID: 12368351
-
Analysis of the human endogenous coregulator complexome.
Cell. 2011 May 27;145(5):787-99
PMID: 21620140
-
Induction of HIV-1 latency and reactivation in primary memory CD4+ T cells.
Blood. 2009 Jan 1;113(1):58-65
PMID: 18849485
-
Selective inhibition of BET bromodomains.
Nature. 2010 Dec 23;468(7327):1067-73
PMID: 20871596
-
RING3 kinase transactivates promoters of cell cycle regulatory genes through E2F.
Cell Growth Differ. 2000 Aug;11(8):417-24
PMID: 10965846
-
Transient-mediated fate determination in a transcriptional circuit of HIV.
Nat Genet. 2008 Apr;40(4):466-70
PMID: 18344999
-
Experimental approaches to the study of HIV-1 latency.
Nat Rev Microbiol. 2007 Feb;5(2):95-106
PMID: 17224919
-
Suppression of inflammation by a synthetic histone mimic.
Nature. 2010 Dec 23;468(7327):1119-23
PMID: 21068722
-
DSIF, a novel transcription elongation factor that regulates RNA polymerase II processivity, is composed of human Spt4 and Spt5 homologs.
Genes Dev. 1998 Feb 1;12(3):343-56
PMID: 9450929
-
Using noise to probe and characterize gene circuits.
Proc Natl Acad Sci U S A. 2008 Aug 5;105(31):10809-14
PMID: 18669661
-
The double bromodomain-containing chromatin adaptor Brd4 and transcriptional regulation.
J Biol Chem. 2007 May 4;282(18):13141-5
PMID: 17329240
-
Conserved P-TEFb-interacting domain of BRD4 inhibits HIV transcription.
Proc Natl Acad Sci U S A. 2007 Aug 21;104(34):13690-5
PMID: 17690245
-
Expression of latent HIV induced by the potent HDAC inhibitor suberoylanilide hydroxamic acid.
AIDS Res Hum Retroviruses. 2009 Feb;25(2):207-12
PMID: 19239360
-
Frequency domain chemical Langevin analysis of stochasticity in gene transcriptional regulation.
J Theor Biol. 2004 Aug 7;229(3):383-94
PMID: 15234205
-
Bromodomain and extra-terminal (BET) bromodomain inhibition activate transcription via transient release of positive transcription elongation factor b (P-TEFb) from 7SK small nuclear ribonucleoprotein.
J Biol Chem. 2012 Oct 19;287(43):36609-16
PMID: 22952229
-
Latent infection of CD4+ T cells provides a mechanism for lifelong persistence of HIV-1, even in patients on effective combination therapy.
Nat Med. 1999 May;5(5):512-7
PMID: 10229227
-
Identification of transcription complexes that contain the double bromodomain protein Brd2 and chromatin remodeling machines.
J Proteome Res. 2006 Mar;5(3):502-11
PMID: 16512664
-
Binding of the 7SK snRNA turns the HEXIM1 protein into a P-TEFb (CDK9/cyclin T) inhibitor.
EMBO J. 2004 Jul 7;23(13):2608-19
PMID: 15201869
-
The double bromodomain proteins Brd2 and Brd3 couple histone acetylation to transcription.
Mol Cell. 2008 Apr 11;30(1):51-60
PMID: 18406326
-
BET bromodomain inhibition targets both c-Myc and IL7R in high-risk acute lymphoblastic leukemia.
Blood. 2012 Oct 4;120(14):2843-52
PMID: 22904298
-
Acetylation of the HIV-1 Tat protein by p300 is important for its transcriptional activity.
Curr Biol. 1999 Dec 16-30;9(24):1489-92
PMID: 10607594
-
HIV-1 tat transcriptional activity is regulated by acetylation.
EMBO J. 1999 Nov 1;18(21):6106-18
PMID: 10545121
-
Transcriptional activation and chromatin remodeling of the HIV-1 promoter in response to histone acetylation.
EMBO J. 1996 Mar 1;15(5):1112-20
PMID: 8605881
-
Mediator and the mechanism of transcriptional activation.
Trends Biochem Sci. 2005 May;30(5):235-9
PMID: 15896740
-
Novel structurally related compounds reactivate latent HIV-1 in a bcl-2-transduced primary CD4+ T cell model without inducing global T cell activation.
J Antimicrob Chemother. 2012 Feb;67(2):398-403
PMID: 22160146
-
Small-molecule screening using a human primary cell model of HIV latency identifies compounds that reverse latency without cellular activation.
J Clin Invest. 2009 Nov;119(11):3473-86
PMID: 19805909
-
Inhibition of P-TEFb (CDK9/Cyclin T) kinase and RNA polymerase II transcription by the coordinated actions of HEXIM1 and 7SK snRNA.
Mol Cell. 2003 Oct;12(4):971-82
PMID: 14580347
-
Transcription elongation factor P-TEFb is required for HIV-1 tat transactivation in vitro.
Genes Dev. 1997 Oct 15;11(20):2622-32
PMID: 9334325
-
Binding of pRB to the PHD protein RBP2 promotes cellular differentiation.
Mol Cell. 2005 Jun 10;18(6):623-35
PMID: 15949438
-
Molecular mechanisms of HIV-1 proviral latency.
Expert Rev Anti Infect Ther. 2005 Oct;3(5):805-14
PMID: 16207172
-
Regulation of P-TEFb elongation complex activity by CDK9 acetylation.
Mol Cell Biol. 2007 Jul;27(13):4641-51
PMID: 17452463
-
NF-kappa B-dependent and -independent pathways of HIV activation in a chronically infected T cell line.
Virology. 1994 Aug 1;202(2):684-94
PMID: 7913275
-
Two-pronged binding with bromodomain-containing protein 4 liberates positive transcription elongation factor b from inactive ribonucleoprotein complexes.
J Biol Chem. 2012 Jan 6;287(2):1090-9
PMID: 22084242