Home LiteratureArticle Details
PMID: 20473271 Published · ppublish English Journal Article Research Support, N.I.H., Extramural

HOPS prevents the disassembly of trans-SNARE complexes by Sec17p/Sec18p during membrane fusion.

The EMBO journal ·Vol. 29 ·No. 12 ·2010-06-16 ·Pages 1948-60

Xu H, Jun Y, Thompson J, Yates J, Wickner W

Abstract

SNARE-dependent membrane fusion requires the disassembly of cis-SNARE complexes (formed by SNAREs anchored to one membrane) followed by the assembly of trans-SNARE complexes (SNAREs anchored to two apposed membranes). Although SNARE complex disassembly and assembly might be thought to be opposing reactions, the proteins promoting disassembly (Sec17p/Sec18p) and assembly (the HOPS complex) work synergistically to support fusion. We now report that trans-SNARE complexes formed during vacuole fusion are largely associated with Sec17p. Using a reconstituted proteoliposome fusion system, we show that trans-SNARE complex, like cis-SNARE complex, is sensitive to Sec17p/Sec18p mediated disassembly. Strikingly, HOPS inhibits the disassembly of SNARE complexes in the trans-, but not in the cis-, configuration. This selective HOPS preservation of trans-SNARE complexes requires HOPS:SNARE recognition and is lost when the apposed bilayers are dissolved in Triton X-100; it is also observed during fusion of isolated vacuoles. HOPS thus directs the Sec17p/Sec18p chaperone system to maximize functional trans-SNARE complex for membrane fusion, a new role of tethering factors during membrane traffic.

MeSH Terms
Adenosine Triphosphatases/metabolism Cell Membrane/metabolism Membrane Fusion Models, Biological SNARE Proteins/metabolism Saccharomyces cerevisiae/physiology Saccharomyces cerevisiae Proteins/metabolism Soluble N-Ethylmaleimide-Sensitive Factor Attachment Proteins/metabolism Vacuoles/metabolism Vesicular Transport Proteins/metabolism
Chemicals
SEC17 protein, S cerevisiae SNARE Proteins Saccharomyces cerevisiae Proteins Soluble N-Ethylmaleimide-Sensitive Factor Attachment Proteins Vesicular Transport Proteins Adenosine Triphosphatases SEC18 protein, S cerevisiae
Authors & Affiliations
5 authors, click to expand affiliations / ORCID
Xu Hao
Department of Biochemistry, Dartmouth Medical School, Hanover, NH, USA.
Jun Youngsoo
Thompson James
Yates John
Wickner William
References (64)
64 references, click to expand
  1. Munc18-1 binding to the neuronal SNARE complex controls synaptic vesicle priming.
    J Cell Biol. 2009 Mar 9;184(5):751-64 PMID: 19255244
  2. The CORVET tethering complex interacts with the yeast Rab5 homolog Vps21 and is involved in endo-lysosomal biogenesis.
    Dev Cell. 2007 May;12(5):739-50 PMID: 17488625
  3. The Gcs1 Arf-GAP mediates Snc1,2 v-SNARE retrieval to the Golgi in yeast.
    Mol Biol Cell. 2006 Apr;17(4):1845-58 PMID: 16452633
  4. Proteins needed for vesicle budding from the Golgi complex are also required for the docking step of homotypic vacuole fusion.
    J Cell Biol. 2000 Mar 20;148(6):1223-29 PMID: 10725335
  5. Hierarchy of protein assembly at the vertex ring domain for yeast vacuole docking and fusion.
    J Cell Biol. 2003 Feb 3;160(3):365-74 PMID: 12566429
  6. Mutations in VPS33B, encoding a regulator of SNARE-dependent membrane fusion, cause arthrogryposis-renal dysfunction-cholestasis (ARC) syndrome.
    Nat Genet. 2004 Apr;36(4):400-4 PMID: 15052268
  7. A vacuolar v-t-SNARE complex, the predominant form in vivo and on isolated vacuoles, is disassembled and activated for docking and fusion.
    J Cell Biol. 1998 Jan 12;140(1):61-9 PMID: 9425154
  8. Calcium can disrupt the SNARE protein complex on sea urchin egg secretory vesicles without irreversibly blocking fusion.
    J Biol Chem. 1998 Dec 11;273(50):33667-73 PMID: 9837952
  9. SNAREpins are functionally resistant to disruption by NSF and alphaSNAP.
    J Cell Biol. 2000 May 29;149(5):1063-72 PMID: 10831610
  10. Sec18p and Vam7p remodel trans-SNARE complexes to permit a lipid-anchored R-SNARE to support yeast vacuole fusion.
    EMBO J. 2007 Dec 12;26(24):4935-45 PMID: 18007597
  11. Evaluation of multidimensional chromatography coupled with tandem mass spectrometry (LC/LC-MS/MS) for large-scale protein analysis: the yeast proteome.
    J Proteome Res. 2003 Jan-Feb;2(1):43-50 PMID: 12643542
  12. Drosophila Vps16A is required for trafficking to lysosomes and biogenesis of pigment granules.
    J Cell Sci. 2005 Aug 15;118(Pt 16):3663-73 PMID: 16046475
  13. HOPS initiates vacuole docking by tethering membranes before trans-SNARE complex assembly.
    Mol Biol Cell. 2010 Jul 1;21(13):2297-305 PMID: 20462954
  14. Minimal membrane docking requirements revealed by reconstitution of Rab GTPase-dependent membrane fusion from purified components.
    Proc Natl Acad Sci U S A. 2009 Oct 20;106(42):17626-33 PMID: 19826089
  15. I2B is a small cytosolic protein that participates in vacuole fusion.
    Proc Natl Acad Sci U S A. 1997 May 27;94(11):5582-7 PMID: 9159115
  16. The Sec34/Sec35p complex, a Ypt1p effector required for retrograde intra-Golgi trafficking, interacts with Golgi SNAREs and COPI vesicle coat proteins.
    J Cell Biol. 2002 May 13;157(4):631-43 PMID: 12011112
  17. Reconstituted membrane fusion requires regulatory lipids, SNAREs and synergistic SNARE chaperones.
    EMBO J. 2008 Aug 6;27(15):2031-42 PMID: 18650938
  18. Capture and release of partially zipped trans-SNARE complexes on intact organelles.
    J Cell Biol. 2009 May 4;185(3):535-49 PMID: 19414611
  19. The Yeast Resource Center Public Data Repository.
    Nucleic Acids Res. 2005 Jan 1;33(Database issue):D378-82 PMID: 15608220
  20. An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database.
    J Am Soc Mass Spectrom. 1994 Nov;5(11):976-89 PMID: 24226387
  21. Phosphatidylinositol 3-phosphate recognition by the FYVE domain.
    Mol Cell. 1999 Jun;3(6):805-11 PMID: 10394369
  22. Yeast vacuoles and membrane fusion pathways.
    EMBO J. 2002 Mar 15;21(6):1241-7 PMID: 11889030
  23. Selective activation of cognate SNAREpins by Sec1/Munc18 proteins.
    Cell. 2007 Jan 12;128(1):183-95 PMID: 17218264
  24. A cycle of Vam7p release from and PtdIns 3-P-dependent rebinding to the yeast vacuole is required for homotypic vacuole fusion.
    J Cell Biol. 2002 Apr 1;157(1):79-89 PMID: 11916982
  25. Regulation of SNARE-mediated membrane fusion during exocytosis.
    Chem Rev. 2008 May;108(5):1669-86 PMID: 18419164
  26. Homotypic vacuole fusion requires Sec17p (yeast alpha-SNAP) and Sec18p (yeast NSF).
    EMBO J. 1996 Jul 1;15(13):3296-305 PMID: 8670830
  27. Automatic quality assessment of peptide tandem mass spectra.
    Bioinformatics. 2004 Aug 4;20 Suppl 1:i49-54 PMID: 15262780
  28. Sec17p and HOPS, in distinct SNARE complexes, mediate SNARE complex disruption or assembly for fusion.
    EMBO J. 2005 May 18;24(10):1775-86 PMID: 15889152
  29. The mouse organellar biogenesis mutant buff results from a mutation in Vps33a, a homologue of yeast vps33 and Drosophila carnation.
    Proc Natl Acad Sci U S A. 2003 Feb 4;100(3):1146-50 PMID: 12538872
  30. New component of the vacuolar class C-Vps complex couples nucleotide exchange on the Ypt7 GTPase to SNARE-dependent docking and fusion.
    J Cell Biol. 2000 Oct 30;151(3):551-62 PMID: 11062257
  31. G-protein ligands inhibit in vitro reactions of vacuole inheritance.
    J Cell Biol. 1994 Jul;126(1):87-97 PMID: 8027189
  32. Phox domain interaction with PtdIns(3)P targets the Vam7 t-SNARE to vacuole membranes.
    Nat Cell Biol. 2001 Jul;3(7):613-8 PMID: 11433291
  33. A soluble SNARE drives rapid docking, bypassing ATP and Sec17/18p for vacuole fusion.
    EMBO J. 2004 Jul 21;23(14):2765-76 PMID: 15241469
  34. Excess vacuolar SNAREs drive lysis and Rab bypass fusion.
    Proc Natl Acad Sci U S A. 2007 Aug 21;104(34):13551-8 PMID: 17699614
  35. TRAPP, a highly conserved novel complex on the cis-Golgi that mediates vesicle docking and fusion.
    EMBO J. 1998 May 1;17(9):2494-503 PMID: 9564032
  36. Direct interaction between the COG complex and the SM protein, Sly1, is required for Golgi SNARE pairing.
    EMBO J. 2009 Jul 22;28(14):2006-17 PMID: 19536132
  37. A Ypt/Rab effector complex containing the Sec1 homolog Vps33p is required for homotypic vacuole fusion.
    Proc Natl Acad Sci U S A. 2000 Aug 15;97(17):9402-7 PMID: 10944212
  38. Large-scale analysis of the yeast proteome by multidimensional protein identification technology.
    Nat Biotechnol. 2001 Mar;19(3):242-7 PMID: 11231557
  39. HOPS proofreads the trans-SNARE complex for yeast vacuole fusion.
    Mol Biol Cell. 2008 Jun;19(6):2500-8 PMID: 18385512
  40. Membrane fusion.
    Nat Struct Mol Biol. 2008 Jul;15(7):658-64 PMID: 18618939
  41. Rabs and their effectors: achieving specificity in membrane traffic.
    Proc Natl Acad Sci U S A. 2006 Aug 8;103(32):11821-7 PMID: 16882731
  42. Purification of active HOPS complex reveals its affinities for phosphoinositides and the SNARE Vam7p.
    EMBO J. 2006 Apr 19;25(8):1579-89 PMID: 16601699
  43. Trans-SNARE complex assembly and yeast vacuole membrane fusion.
    Proc Natl Acad Sci U S A. 2007 May 22;104(21):8755-60 PMID: 17502611
  44. Genes for directing vacuolar morphogenesis in Saccharomyces cerevisiae. I. Isolation and characterization of two classes of vam mutants.
    J Biol Chem. 1992 Sep 15;267(26):18665-70 PMID: 1526998
  45. Sec18p (NSF)-driven release of Sec17p (alpha-SNAP) can precede docking and fusion of yeast vacuoles.
    Cell. 1996 Apr 5;85(1):83-94 PMID: 8620540
  46. The AtC-VPS protein complex is localized to the tonoplast and the prevacuolar compartment in arabidopsis.
    Mol Biol Cell. 2003 Feb;14(2):361-9 PMID: 12589039
  47. Defining the functions of trans-SNARE pairs.
    Nature. 1998 Dec 10;396(6711):543-8 PMID: 9859990
  48. Reconstitution of Rab- and SNARE-dependent membrane fusion by synthetic endosomes.
    Nature. 2009 Jun 25;459(7250):1091-7 PMID: 19458617
  49. Vps51p links the VFT complex to the SNARE Tlg1p.
    J Biol Chem. 2002 Dec 13;277(50):48318-24 PMID: 12377769
  50. Membrane fusion: grappling with SNARE and SM proteins.
    Science. 2009 Jan 23;323(5913):474-7 PMID: 19164740
  51. Validation of tandem mass spectrometry database search results using DTASelect.
    Curr Protoc Bioinformatics. 2007 Jan;Chapter 13:Unit 13.4 PMID: 18428785
  52. Code developments to improve the efficiency of automated MS/MS spectra interpretation.
    J Proteome Res. 2002 May-Jun;1(3):211-5 PMID: 12645897
  53. Interdependent assembly of specific regulatory lipids and membrane fusion proteins into the vertex ring domain of docked vacuoles.
    J Cell Biol. 2004 Dec 20;167(6):1087-98 PMID: 15611334
  54. Membrane fusion: SNAREs and regulation.
    Cell Mol Life Sci. 2008 Sep;65(18):2814-32 PMID: 18726177
  55. The effector domain of myristoylated alanine-rich C kinase substrate binds strongly to phosphatidylinositol 4,5-bisphosphate.
    J Biol Chem. 2001 Feb 16;276(7):5012-9 PMID: 11053422
  56. DTASelect and Contrast: tools for assembling and comparing protein identifications from shotgun proteomics.
    J Proteome Res. 2002 Jan-Feb;1(1):21-6 PMID: 12643522
  57. Localization of phosphatidylinositol 3-phosphate in yeast and mammalian cells.
    EMBO J. 2000 Sep 1;19(17):4577-88 PMID: 10970851
  58. A novel site of action for alpha-SNAP in the SNARE conformational cycle controlling membrane fusion.
    Mol Biol Cell. 2008 Mar;19(3):776-84 PMID: 18094056
  59. The exocyst is an effector for Sec4p, targeting secretory vesicles to sites of exocytosis.
    EMBO J. 1999 Feb 15;18(4):1071-80 PMID: 10022848
  60. SNAREpins: minimal machinery for membrane fusion.
    Cell. 1998 Mar 20;92(6):759-72 PMID: 9529252
  61. Interaction of the conserved oligomeric Golgi complex with t-SNARE Syntaxin5a/Sed5 enhances intra-Golgi SNARE complex stability.
    J Cell Biol. 2007 Dec 17;179(6):1179-92 PMID: 18086915
  62. Phosphatidylinositol(3)-phosphate signaling mediated by specific binding to RING FYVE domains.
    Mol Cell. 1998 Jul;2(1):157-62 PMID: 9702203
  63. Rho1p and Cdc42p act after Ypt7p to regulate vacuole docking.
    EMBO J. 2001 Oct 15;20(20):5650-6 PMID: 11598008
  64. Rab cascades and tethering factors in the endomembrane system.
    FEBS Lett. 2007 May 22;581(11):2125-30 PMID: 17316615
Article Info
Journal
The EMBO journal
Abbr.
EMBO J
ISSN
1460-2075
Published
2010-06-16
Epub
2010-00-14
Pages
1948-60
Language
English
Region
England
NLM ID
8208664
PMCID
PMC2892374
Subset
IM
Grants
NCRR NIH HHS · P41 RR011823 · United States
NIGMS NIH HHS · R01 GM023377 · United States
NCRR NIH HHS · P41 RR11823 · United States
NIGMS NIH HHS · GM23377 · United States
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com