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PMID: 1922073 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

Mutations in SPT16/CDC68 suppress cis- and trans-acting mutations that affect promoter function in Saccharomyces cerevisiae.

Molecular and cellular biology ·Vol. 11 ·No. 11 ·1991-11-00 ·Pages 5710-7

Malone EA, Clark CD, Chiang A, Winston F

Abstract

SPT16 was previously identified as a high-copy-number suppressor of delta insertion mutations in the 5' regions of the HIS4 and LYS2 genes of Saccharomyces cerevisiae. We have constructed null mutations in the SPT16 gene and have demonstrated that it is essential for growth. Temperature-sensitive-lethality spt16 alleles have been isolated and shown to be pleiotropic; at a temperature permissive for growth, spt16 mutations suppress delta insertion mutations, a deletion of the SUC2 upstream activating sequence, and mutations in trans-acting genes required for both SUC2 and Ty expression. In addition, SPT16 is identical to CDC68, a gene previously shown to be required for passage through the cell cycle control point START. However, at least some transcriptional effects caused by spt16 mutations are independent of arrest at START. These results and those in the accompanying paper (A. Rowley, R. A. Singer, and G. C. Johnston, Mol. Cell. Biol. 11:5718-5726, 1991) indicate that SPT16/CDC68 is required for normal transcription of many loci in S. cerevisiae.

Related Genes
MeSH Terms
DNA, Fungal/genetics,isolation & purification Genes, Fungal Genotype Mutagenesis, Insertional Plasmids Promoter Regions, Genetic Restriction Mapping Saccharomyces cerevisiae/genetics Suppression, Genetic Transcription, Genetic
Chemicals
DNA, Fungal
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Malone E A
Department of Genetics, Harvard Medical School, Boston, Massachusetts 02115.
Clark C D
Chiang A
Winston F
References (56)
56 references, click to expand
  1. Suppressors of SNF2 mutations restore invertase derepression and cause temperature-sensitive lethality in yeast.
    Genetics. 1986 Apr;112(4):741-53 PMID: 3514373
  2. Identification of silencer binding proteins from yeast: possible roles in SIR control and DNA replication.
    EMBO J. 1987 Feb;6(2):461-7 PMID: 15981337
  3. The SPT6 gene is essential for growth and is required for delta-mediated transcription in Saccharomyces cerevisiae.
    Mol Cell Biol. 1987 Feb;7(2):679-86 PMID: 3029564
  4. Three genes are required for trans-activation of Ty transcription in yeast.
    Genetics. 1987 Apr;115(4):649-56 PMID: 3034719
  5. A Tn10-lacZ-kanR-URA3 gene fusion transposon for insertion mutagenesis and fusion analysis of yeast and bacterial genes.
    Genetics. 1987 Jun;116(2):191-9 PMID: 3038670
  6. MAT alpha 1 protein, a yeast transcription activator, binds synergistically with a second protein to a set of cell-type-specific genes.
    Cell. 1987 Aug 28;50(5):681-91 PMID: 3304657
  7. SSN20 is an essential gene with mutant alleles that suppress defects in SUC2 transcription in Saccharomyces cerevisiae.
    Mol Cell Biol. 1987 Feb;7(2):672-8 PMID: 3547080
  8. Anionic regions in nuclear proteins.
    J Cell Biol. 1987 Oct;105(4):1479-82 PMID: 3312230
  9. Purification and cloning of a DNA binding protein from yeast that binds to both silencer and activator elements.
    Cell. 1987 Dec 4;51(5):721-32 PMID: 3315231
  10. A ten-minute DNA preparation from yeast efficiently releases autonomous plasmids for transformation of Escherichia coli.
    Gene. 1987;57(2-3):267-72 PMID: 3319781
  11. Two DNA-binding factors recognize specific sequences at silencers, upstream activating sequences, autonomously replicating sequences, and telomeres in Saccharomyces cerevisiae.
    Mol Cell Biol. 1988 Jan;8(1):210-25 PMID: 3275867
  12. 5-Fluoroorotic acid as a selective agent in yeast molecular genetics.
    Methods Enzymol. 1987;154:164-75 PMID: 3323810
  13. Autoregulation of 2 micron circle gene expression provides a model for maintenance of stable plasmid copy levels.
    Cell. 1988 Jan 15;52(1):27-37 PMID: 2449970
  14. SPT3 is required for normal levels of a-factor and alpha-factor expression in Saccharomyces cerevisiae.
    Mol Cell Biol. 1988 Feb;8(2):822-7 PMID: 3127692
  15. Isolation and analysis of a novel class of suppressor of Ty insertion mutations in Saccharomyces cerevisiae.
    Genetics. 1988 Feb;118(2):203-12 PMID: 2834263
  16. Changes in histone gene dosage alter transcription in yeast.
    Genes Dev. 1988 Feb;2(2):150-9 PMID: 2834270
  17. The yeast cell-type-specific repressor alpha 2 acts cooperatively with a non-cell-type-specific protein.
    Cell. 1988 Jun 17;53(6):927-36 PMID: 3289753
  18. GAL11 protein, an auxiliary transcription activator for genes encoding galactose-metabolizing enzymes in Saccharomyces cerevisiae.
    Mol Cell Biol. 1988 Nov;8(11):4991-9 PMID: 3062377
  19. A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae.
    Genetics. 1989 May;122(1):19-27 PMID: 2659436
  20. Genetic control of the cell division cycle in yeast.
    Science. 1974 Jan 11;183(4120):46-51 PMID: 4587263
  21. Detection of specific sequences among DNA fragments separated by gel electrophoresis.
    J Mol Biol. 1975 Nov 5;98(3):503-17 PMID: 1195397
  22. Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I.
    J Mol Biol. 1977 Jun 15;113(1):237-51 PMID: 881736
  23. High-frequency transformation of yeast: autonomous replication of hybrid DNA molecules.
    Proc Natl Acad Sci U S A. 1979 Mar;76(3):1035-9 PMID: 375221
  24. SPT15, the gene encoding the yeast TATA binding factor TFIID, is required for normal transcription initiation in vivo.
    Cell. 1989 Sep 22;58(6):1183-91 PMID: 2673545
  25. Genetic map of Saccharomyces cerevisiae, edition 10.
    Yeast. 1989 Sep-Oct;5(5):321-403 PMID: 2678811
  26. The Saccharomyces cerevisiae SPT13/GAL11 gene has both positive and negative regulatory roles in transcription.
    Mol Cell Biol. 1989 Dec;9(12):5602-9 PMID: 2685570
  27. Mutational analysis of the Saccharomyces cerevisiae SNF1 protein kinase and evidence for functional interaction with the SNF4 protein.
    Mol Cell Biol. 1989 Nov;9(11):5034-44 PMID: 2557546
  28. Molecular analysis of the SNF4 gene of Saccharomyces cerevisiae: evidence for physical association of the SNF4 protein with the SNF1 protein kinase.
    Mol Cell Biol. 1989 Nov;9(11):5045-54 PMID: 2481228
  29. Size selection identifies new genes that regulate Saccharomyces cerevisiae cell proliferation.
    Genetics. 1990 Jan;124(1):81-90 PMID: 2407608
  30. SNF6 encodes a nuclear protein that is required for expression of many genes in Saccharomyces cerevisiae.
    Mol Cell Biol. 1990 Jun;10(6):2544-53 PMID: 2188093
  31. SPT6, an essential gene that affects transcription in Saccharomyces cerevisiae, encodes a nuclear protein with an extremely acidic amino terminus.
    Mol Cell Biol. 1990 Sep;10(9):4935-41 PMID: 2201908
  32. A rapid alkaline extraction procedure for screening recombinant plasmid DNA.
    Nucleic Acids Res. 1979 Nov 24;7(6):1513-23 PMID: 388356
  33. Replacement of chromosome segments with altered DNA sequences constructed in vitro.
    Proc Natl Acad Sci U S A. 1979 Oct;76(10):4951-5 PMID: 388424
  34. Sterile host yeasts (SHY): a eukaryotic system of biological containment for recombinant DNA experiments.
    Gene. 1979 Dec;8(1):17-24 PMID: 395030
  35. Insertion of the eukaryotic transposable element Ty1 creates a 5-base pair duplication.
    Nature. 1980 Jul 24;286(5771):352-6 PMID: 6250062
  36. DNA rearrangements associated with a transposable element in yeast.
    Cell. 1980 Aug;21(1):239-49 PMID: 6250713
  37. Two differentially regulated mRNAs with different 5' ends encode secreted with intracellular forms of yeast invertase.
    Cell. 1982 Jan;28(1):145-54 PMID: 7039847
  38. Mutants of yeast defective in sucrose utilization.
    Genetics. 1981 May;98(1):25-40 PMID: 7040163
  39. Transformation of intact yeast cells treated with alkali cations.
    J Bacteriol. 1983 Jan;153(1):163-8 PMID: 6336730
  40. One-step gene disruption in yeast.
    Methods Enzymol. 1983;101:202-11 PMID: 6310324
  41. A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity.
    Anal Biochem. 1983 Jul 1;132(1):6-13 PMID: 6312838
  42. Separation of yeast chromosome-sized DNAs by pulsed field gradient gel electrophoresis.
    Cell. 1984 May;37(1):67-75 PMID: 6373014
  43. "A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity". Addendum.
    Anal Biochem. 1984 Feb;137(1):266-7 PMID: 6329026
  44. Mutations affecting Ty-mediated expression of the HIS4 gene of Saccharomyces cerevisiae.
    Genetics. 1984 Jun;107(2):179-97 PMID: 6329902
  45. Sequences that regulate the divergent GAL1-GAL10 promoter in Saccharomyces cerevisiae.
    Mol Cell Biol. 1984 Aug;4(8):1440-8 PMID: 6092912
  46. The SPT3 gene is required for normal transcription of Ty elements in S. cerevisiae.
    Cell. 1984 Dec;39(3 Pt 2):675-82 PMID: 6096019
  47. Genes affecting the regulation of SUC2 gene expression by glucose repression in Saccharomyces cerevisiae.
    Genetics. 1984 Dec;108(4):845-58 PMID: 6392017
  48. A positive selection for mutants lacking orotidine-5'-phosphate decarboxylase activity in yeast: 5-fluoro-orotic acid resistance.
    Mol Gen Genet. 1984;197(2):345-6 PMID: 6394957
  49. Upstream region required for regulated expression of the glucose-repressible SUC2 gene of Saccharomyces cerevisiae.
    Mol Cell Biol. 1984 Dec;4(12):2750-7 PMID: 6396505
  50. A general upstream binding factor for genes of the yeast translational apparatus.
    EMBO J. 1985 Dec 16;4(13A):3539-47 PMID: 3912170
  51. Electrophoretic separations of large DNA molecules by periodic inversion of the electric field.
    Science. 1986 Apr 4;232(4746):65-8 PMID: 3952500
  52. Positional mapping of genes by chromosome blotting and chromosome fragmentation.
    Methods Enzymol. 1991;194:57-77 PMID: 2005810
  53. SPT5, an essential gene important for normal transcription in Saccharomyces cerevisiae, encodes an acidic nuclear protein with a carboxy-terminal repeat.
    Mol Cell Biol. 1991 Jun;11(6):3009-19 PMID: 1840633
  54. The SNF2, SNF5 and SNF6 genes are required for Ty transcription in Saccharomyces cerevisiae.
    Genetics. 1991 May;128(1):69-77 PMID: 1648006
  55. CDC68, a yeast gene that affects regulation of cell proliferation and transcription, encodes a protein with a highly acidic carboxyl terminus.
    Mol Cell Biol. 1991 Nov;11(11):5718-26 PMID: 1833637
  56. Molecular analysis of SNF2 and SNF5, genes required for expression of glucose-repressible genes in Saccharomyces cerevisiae.
    Mol Cell Biol. 1986 Nov;6(11):3643-51 PMID: 3540598
Article Info
Journal
Molecular and cellular biology
Abbr.
Mol Cell Biol
ISSN
0270-7306
Published
1991-11-00
Pages
5710-7
Language
English
Region
United States
NLM ID
8109087
PMCID
PMC361942
Subset
IM
Grants
NIGMS NIH HHS · GM32967 · United States
NIGMS NIH HHS · T32-GM07196 · United States
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