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PMID: 14624003 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

The ability to form full-length intron RNA circles is a general property of nuclear group I introns.

RNA (New York, N.Y.) ·Vol. 9 ·No. 12 ·2003-12-00 ·Pages 1464-75

Nielsen H, Fiskaa T, Birgisdottir AB, Haugen P, Einvik C, Johansen S

Abstract

In addition to splicing, group I intron RNA is capable of an alternative two-step processing pathway that results in the formation of full-length intron circular RNA. The circularization pathway is initiated by hydrolytic cleavage at the 3' splice site and followed by a transesterification reaction in which the intron terminal guanosine attacks the 5' splice site presented in a structure analogous to that of the first step of splicing. The products of the reactions are full-length circular intron and unligated exons. For this reason, the circularization reaction is to the benefit of the intron at the expense of the host. The circularization pathway has distinct structural requirements that differ from those of splicing and appears to be specifically suppressed in vivo. The ability to form full-length circles is found in all types of nuclear group I introns, including those from the Tetrahymena ribosomal DNA. The biological function of the full-length circles is not known, but the fact that the circles contain the entire genetic information of the intron suggests a role in intron mobility.

MeSH Terms
Base Sequence Cell Nucleus/chemistry DNA Primers Exons Hydrolysis Introns Molecular Sequence Data Mutagenesis Nucleic Acid Conformation RNA/chemistry,genetics RNA Precursors/chemistry RNA Splicing RNA, Circular
Chemicals
DNA Primers RNA Precursors RNA, Circular RNA
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Nielsen Henrik
Department of Medical Biochemistry and Genetics, The Panum Institute, University of Copenhagen, DK-2200 Copenhagen, Denmark.
Fiskaa Tonje
Birgisdottir Asa Birna
Haugen Peik
Einvik Christer
Johansen Steinar
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Article Info
Journal
RNA (New York, N.Y.)
Abbr.
RNA
ISSN
1355-8382
Published
2003-12-00
Pages
1464-75
Language
English
Region
United States
NLM ID
9509184
PMCID
PMC1370501
Subset
IM
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