OPN1LW(opsin 1 (cone pigments), long-wave-sensitive) 转至新版数据库

基因基本信息

基因基本信息

基因简称(symbol)
    [HGNC]     [GeneCards]     [NCBI]
基因种类(locus group)
同源简称(alias symbol)
基因家族代码(gene_family_id)
    [HGNC]     [GenScript]
omim代码
entrez码
    [Vega]
vega基因码
ensembl基因码
    [Ensembl]
基因家族(gene family)
refseq数据库代号

更多...

基因种类(locus_type)
基因名称状态(status)
location_sortable
同源基因名称(alias name)
基因名称批准使用时间(date_approved_reserved)
基因简称更名时间(date_symbol_changed)
基因名称更名时间(date_name_changed)
更新时间(date_modified)
ucsc码
ena
ccds数据码
uniprot数据码
pubmed代码
mgd码
rgd码
生命科学数据库(lsdb)
更新时间(date modified)
cosmic
mirbase
基因曾用简称(prev symbol)
基因曾用名称(prev name)
homeodb
cosmic
snornabase
bioparadigms slc
orphanet
假基因信息(pseudogeneorg)
horde id
merops
imgt
iuphar
kznf基因类别
mamit-trnadb
cd
LncRNA数据库
酶代码
中间纤维数据库

收起

基因染色体位置

基因染色体位置

Xq28
基因染色体位置图

基因简述

基因简述

This gene encodes for a light absorbing visual pigment of the opsin gene family. The encoded protein is called red cone photopigment or long-wavelength sensitive opsin. Opsins are G-protein coupled receptors with seven transmembrane domains, an N-terminal extracellular domain, and a C-terminal cytoplasmic domain. This gene and the medium-wavelength opsin gene are tandemly arrayed on the X chromosome and frequent unequal recombination and gene conversion may occur between these sequences. X chromosomes may have fusions of the medium- and long-wavelength opsin genes or may have more than one copy of these genes. Defects in this gene are the cause of partial, protanopic colorblindness. [provided by RefSeq, Jul 2008]

[中文简述(自动翻译):]  这个基因编码的调光吸收视蛋白基因家族的视色素。所编码的蛋白质被称为红锥感光色素或长波长敏感视蛋白。视蛋白是G蛋白偶联受体与七个跨膜结构域，N-末端细胞外结构域和C末端细胞质结构域。此基因和中波长视蛋白基因而串联排列的X染色体和频繁不等重组和基因转化这些序列之间可能会发生。 X染色体可具有中等和长波长视蛋白基因的融合体或可以具有这些基因的多于一个的拷贝。这种基因缺陷是局部的，protanopic色盲的原因。 [由RefSeq的，2008年7月提供]

OMIM数据库中对OPN1LW基因的介绍     Wikipedia数据库中对OPN1LW基因的介绍

基因序列

基因序列

OPN1LW基因的碱基序列：[NCBI]

基因突变

基因突变

OPN1LW基因的碱基突变：           显示全部snp
rs782815809       rs782816361       rs782813028       rs782811955       rs782809344       rs782800914       rs782793124       rs782797093       rs782789511       rs782786685       rs782783784       rs782786462       rs782777199       rs782783558       rs782765931       rs782762187       rs782757739       rs782754056       rs782755469       rs782744314       rs782735470       rs782727254       rs782727946       rs782722274       rs782727055       rs782719795       rs782711582       rs782715468       rs782708878       rs782708580       rs782707681       rs782699550       rs782697219       rs782698416       rs782696164       rs782693292       rs782695015      
rs782691429       rs782675784       rs782671452       rs782670567       rs782660160       rs782660085       rs782658391       rs782651758       rs782649403       rs782638732       rs782637696       rs782626484       rs782634862       rs782625204       rs782608248       rs782601626       rs782602072       rs782592456       rs782591655       rs782589912       rs782576171       rs782583807       rs782568449       rs782568898       rs782570988       rs782550559       rs782558479       rs782549627       rs782549215       rs782540205       rs782547561       rs782529838       rs782529534       rs782528898       rs782526008       rs782523727       rs782522265       rs782520080       rs782521889       rs782514911       rs782506559       rs782505166       rs782505807       rs782503336       rs782498380       rs782494665       rs782494466       rs782484270       rs782494029       rs782481797       rs782480227       rs782481346       rs782466344       rs782463120       rs782458041       rs782452318       rs782456042       rs782426793       rs782419890       rs782420318       rs782404715       rs782404151       rs782399134       rs782394778       rs782395128       rs782393314       rs782384172       rs782392196       rs782374234       rs782373881       rs782361699       rs782365080       rs782358874       rs782360758       rs782358027       rs782342928       rs782354084       rs782337911       rs782340336       rs782326320       rs782334035       rs782324765       rs782323092       rs782319497       rs782320360       rs782317950       rs782312823       rs782305369       rs782312193       rs782304727       rs782293571       rs782293492       rs782292319       rs782292865       rs782284714       rs782291194       rs782266071       rs782260583       rs782255535       rs782257692       rs782249764       rs782250157       rs782239449       rs782241016       rs782232917       rs782228887       rs782228692       rs782228288       rs782228161       rs782223333       rs782217937       rs782221893       rs782210449       rs782197748       rs782201083       rs782188648       rs782194969       rs782172766       rs782171425       rs782169976       rs782164359       rs782168842       rs782163373       rs782151075       rs782146239       rs782139168       rs782136368       rs782130172       rs782130602       rs782130010       rs782129402       rs782128761       rs782124203       rs782122456       rs782112973       rs782101481       rs782102273       rs782099689       rs782088145       rs782091059       rs782086222       rs782082005       rs782085161       rs782074812       rs782079976       rs782070898       rs782068555       rs782068125       rs782058799       rs782066766       rs782047119       rs782053435       rs782056029       rs782041438       rs782042307       rs782039891       rs782028359       rs782030405       rs782024126       rs782026917       rs782017436       rs782018453       rs782000011       rs782012092       rs781994567       rs781989269       rs781989418       rs781989203       rs781985694       rs781987436       rs781987854       rs781979257       rs781973306       rs781963670       rs781968534       rs781960740       rs781955870       rs781953968       rs781947773       rs781947483       rs781941716       rs781947089       rs781936473       rs781937145       rs781931953       rs781927417       rs781925997       rs781915220       rs781915302       rs781914502       rs781910173       rs781905511       rs781904091       rs781902165       rs781898555       rs781899733       rs781900954       rs781897077       rs781890434       rs781896122       rs781883277       rs781883555       rs781882914       rs781881080       rs781879839       rs781874967       rs781869198       rs781873159       rs781866279       rs781867813       rs781861633       rs781860709       rs781860044       rs781858598       rs781846140       rs781857901       rs781838044       rs781845083       rs781836898       rs781829645       rs781816908       rs781827122       rs781814486       rs781810750       rs781813166       rs781810419       rs781807699       rs781801563       rs781787315       rs781787904       rs781794536       rs376687141       rs377206559       rs376303721       rs376112729       rs375863094       rs376103823       rs375152166       rs373601495       rs373658326       rs372949568       rs372850819       rs372736549       rs371840734       rs371146776       rs371354375       rs369185568       rs369819571       rs368258963       rs368246376       rs367733582       rs201496701       rs201546532       rs201015173       rs200533340       rs200528091       rs199954237       rs193009726       rs191816678       rs191331006       rs191231131       rs190724024       rs190224515       rs190089155       rs189958715       rs189805263       rs189098163       rs189081599       rs188572146       rs188401699       rs187439345       rs187328534       rs187082330       rs186803489       rs186136171       rs185763212       rs185684592       rs184102751       rs184978836       rs184047537       rs183300001       rs182797797       rs182291968       rs181571944       rs181434161       rs180900614       rs151017593       rs150391359       rs149897670       rs149665617       rs149719211       rs148583295       rs148267962       rs147850074       rs146127280       rs146138552       rs145631912       rs145534803       rs145510546       rs145097171       rs145009674       rs144864828       rs142831615       rs144275648       rs142064931       rs140085321       rs139583770       rs138979991       rs138307223       rs79462399       rs112869248       rs77453588       rs77077377       rs77107957       rs76993430       rs73640844       rs56171282       rs35450739       rs17294500       rs12397128       rs12397127       rs10482472       rs5989605       rs5986964       rs5986963       rs4578146       rs5986961       rs3890298       rs3021127       rs2315125       rs2315127       rs2315123       rs2315124       rs2314756       rs2315122       rs2157087       rs1573657       rs1065440       rs1573656       rs1065439       rs1065422       rs1065426       rs949431       rs949430       rs916177       rs762841       rs731614       rs731612       rs713      

基因表达

基因表达

OPN1LW基因在不同组织中的表达：    [UniProt]

基因在不同组织中的表达图

基因引物

基因引物

正向引物序列
正向引物Tm值
反向引物序列
反向引物Tm值
rank
CAGGTCTCTGGCTACTTCG
60
GAGACCTGTGATCCCACAC
60
TTGGTTGGAGCAGGTACTG
60
ACAATCATGTAAGACTGCACC
59
TTGGTTGGAGCAGGTACTG
60
GACAATCATGTAAGACTGCACC
60
GGTCTCTGGCTACTTCGTG
60
GAGACCTGTGATCCCACAC
60
TTGGTTGGAGCAGGTACTG
60
CAATCATGTAAGACTGCACCC
59
GGTCTCTGGCTACTTCGTG
60
CAGAGACCTGTGATCCCAC
60

转录因子

转录因子

      尚未收录相关数据

基因本体信息

OPN1LW基因（以及对应的蛋白质）的细胞分布位置：

[UniProt]     [GenomeNet]

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 溶酶体
  • 内涵体
  • 细胞核
  • 细胞质
  • 液泡
  • 细胞膜
  • 细胞外基质
  • 内质网
  • 线粒体
  • 高尔基体
  • 细胞骨架

OPN1LW基因的本体（GO）信息：

GO库代码
对应的蛋白质
来源代码
GO:0004930
H0Y622(UniProtKB)
IEA
GO:0007186
H0Y622(UniProtKB)
IEA
GO:0007601
H0Y622(UniProtKB)
IEA
GO:0007602
H0Y622(UniProtKB)
IEA
GO:0016021
H0Y622(UniProtKB)
IEA
GO:0001523
P04000(UniProtKB)
TAS
GO:0001750
P04000(UniProtKB)
IBA
GO:0005887
P04000(UniProtKB)
TAS
GO:0007165
P04000(UniProtKB)
TAS
GO:0007186
P04000(UniProtKB)
IBA
GO:0007601
P04000(UniProtKB)
IEA
GO:0007602
P04000(UniProtKB)
IBA
GO:0008020
P04000(UniProtKB)
IBA
GO:0009584
P04000(UniProtKB)
IEA
GO:0009881
P04000(UniProtKB)
IMP
GO:0018298
P04000(UniProtKB)
IEA
GO:0032467
P04000(UniProtKB)
IMP
GO:0042622
P04000(UniProtKB)
TAS
GO:0042622
P04000(UniProtKB)
TAS
GO:0042622
P04000(UniProtKB)
TAS
GO:0042622
P04000(UniProtKB)
TAS
GO:0042622
P04000(UniProtKB)
TAS
GO:0042622
P04000(UniProtKB)
TAS
GO:0042622
P04000(UniProtKB)
TAS
GO:0042622
P04000(UniProtKB)
TAS
GO:0071482
P04000(UniProtKB)
IBA

基因相互作用关系

基因相互作用关系

基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称

基因相关microRNA

基因相关microRNA

可能调控OPN1LW基因的相关microRNA：     

基因通路图

基因通路图

基因的通路属性图
通路基因列表

基因相关疾病

基因相关疾病

疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Cone monochromatism 0.48 1 2 CLINVAR_CTD_human_ORPHANET_UNIPROT
COLORBLINDNESS, PARTIAL, PROTAN SERIES 0.24 1 0 CTD_human_UNIPROT
Color Blindness, Red 0.12 0 1 CLINVAR
Achromatopsia incomplete, X-linked 0.12 0 0 ORPHANET
Leukemia, Myelocytic, Acute 0.005157396 19 0 BeFree
Rubinstein-Taybi Syndrome 0.002985861 11 0 BeFree
leukemia 0.002714419 10 0 BeFree
Retinal Diseases 0.002367032 1 0 GAD
Sarcoidosis 0.002367032 1 0 GAD
Rothmund-Thomson syndrome 0.001900093 7 0 BeFree
Rett Syndrome 0.001900093 7 0 BeFree
Malignant neoplasm of prostate 0.001900093 7 0 BeFree
Leukemogenesis 0.001900093 7 0 BeFree
Prostate carcinoma 0.001900093 7 0 BeFree
Malignant neoplasm of breast 0.001628651 6 0 BeFree
Breast Carcinoma 0.001628651 6 0 BeFree
Carcinogenesis 0.001357209 5 0 BeFree
Acute leukemia 0.001085767 4 0 BeFree
Treatment related acute myeloid leukaemia 0.001085767 4 0 BeFree
Tumor Progression 0.000814326 3 0 BeFree
Malignant neoplasm of lung 0.000814326 3 0 BeFree
Carcinoma of lung 0.000814326 3 0 BeFree
Malignant tumor of colon 0.000542884 2 0 BeFree
Developmental Disabilities 0.000542884 2 0 BeFree
Acute myelomonocytic leukemia 0.000542884 2 0 BeFree
Mental Retardation 0.000542884 2 0 BeFree
Ovarian Carcinoma 0.000542884 2 0 BeFree
Virus Diseases 0.000542884 2 0 BeFree
Memory impairment 0.000542884 2 0 BeFree
Colon Carcinoma 0.000542884 2 0 BeFree
Malignant neoplasm of ovary 0.000542884 2 0 BeFree
Adenovirus Infections 0.000271442 1 0 BeFree
Alzheimer's Disease 0.000271442 1 0 BeFree
Autoimmune Diseases 0.000271442 1 0 BeFree
Candidiasis 0.000271442 1 0 BeFree
Noninfiltrating Intraductal Carcinoma 0.000271442 1 0 BeFree
Non-Small Cell Lung Carcinoma 0.000271442 1 0 BeFree
Colorectal Carcinoma 0.000271442 1 0 BeFree
Glioma 0.000271442 1 0 BeFree
Hematological Disease 0.000271442 1 0 BeFree
HIV Infections 0.000271442 1 0 BeFree
Chronic Lymphocytic Leukemia 0.000271442 1 0 BeFree
Leukemia, Myelomonocytic, Chronic 0.000271442 1 0 BeFree
Adult T-Cell Lymphoma/Leukemia 0.000271442 1 0 BeFree
Leukoencephalopathy, Progressive Multifocal 0.000271442 1 0 BeFree
Chronic Obstructive Airway Disease 0.000271442 1 0 BeFree
Lung Neoplasms 0.000271442 1 0 BeFree
Lymphoma 0.000271442 1 0 BeFree
melanoma 0.000271442 1 0 BeFree
Multiple Myeloma 0.000271442 1 0 BeFree
Neoplasm Metastasis 0.000271442 1 0 BeFree
Melanocytic nevus 0.000271442 1 0 BeFree
Pallor 0.000271442 1 0 BeFree
Retinal Degeneration 0.000271442 1 0 BeFree
Septicemia 0.000271442 1 0 BeFree
Diffuse Large B-Cell Lymphoma 0.000271442 1 0 BeFree
Ataxia, Spinocerebellar 0.000271442 1 0 BeFree
Adenocarcinoma of lung (disorder) 0.000271442 1 0 BeFree
Esophageal carcinoma 0.000271442 1 0 BeFree
Papillary thyroid carcinoma 0.000271442 1 0 BeFree
Color blindness 0.000271442 1 0 BeFree
Panhypopituitarism 0.000271442 1 0 BeFree
Sepsis 0.000271442 1 0 BeFree
Severe myopia 0.000271442 1 0 BeFree
Squamous cell carcinoma of esophagus 0.000271442 1 0 BeFree
Senile Plaques 0.000271442 1 0 BeFree
Spinocerebellar Ataxia Type 1 0.000271442 1 0 BeFree
Ductal Carcinoma 0.000271442 1 0 BeFree
Sarcoma 0.000271442 1 0 BeFree
Congenital central hypoventilation 0.000271442 1 0 BeFree
Therapy-related myelodysplastic syndrome 0.000271442 1 0 BeFree
Tumor Angiogenesis 0.000271442 1 0 BeFree
Neurodevelopmental Disorders 0.000271442 1 0 BeFree
Promyelocytic leukemia 0.000271442 1 0 BeFree
Treatment related leukaemia 0.000271442 1 0 BeFree

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