GGPS1(geranylgeranyl diphosphate synthase 1) 转至新版数据库

基因简称(symbol)
    [HGNC]     [GeneCards]     [NCBI]
基因种类(locus group)
同源简称(alias symbol)
基因家族代码(gene_family_id)
    [HGNC]     [GenScript]
omim代码
entrez码
    [Vega]
vega基因码
ensembl基因码
    [Ensembl]
基因家族(gene family)
refseq数据库代号

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基因种类(locus_type)
基因名称状态(status)
location_sortable
同源基因名称(alias name)
基因名称批准使用时间(date_approved_reserved)
基因简称更名时间(date_symbol_changed)
基因名称更名时间(date_name_changed)
更新时间(date_modified)
ucsc码
ena
ccds数据码
uniprot数据码
pubmed代码
mgd码
rgd码
生命科学数据库(lsdb)
更新时间(date modified)
cosmic
mirbase
基因曾用简称(prev symbol)
基因曾用名称(prev name)
homeodb
cosmic
snornabase
bioparadigms slc
orphanet
假基因信息(pseudogeneorg)
horde id
merops
imgt
iuphar
kznf基因类别
mamit-trnadb
cd
LncRNA数据库
酶代码
中间纤维数据库

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1q43
基因染色体位置图

This gene is a member of the prenyltransferase family and encodes a protein with geranylgeranyl diphosphate (GGPP) synthase activity. The enzyme catalyzes the synthesis of GGPP from farnesyl diphosphate and isopentenyl diphosphate. GGPP is an important molecule responsible for the C20-prenylation of proteins and for the regulation of a nuclear hormone receptor. Alternate transcriptional splice variants, both protein-coding and non-protein-coding, have been found for this gene. [provided by RefSeq, Sep 2010]

[中文简述(自动翻译):]  此基因是异戊烯转移家族的成员,并编码具有香叶基香叶基二磷酸(GGPP)合酶活性的蛋白质。酶催化GGPP的从法尼基二磷酸和异戊烯二磷酸的合成。 GGPP负责蛋白质的C20-异戊二烯化和核激素受体的调节的重要分子。备用转录剪接变体,既蛋白编码和非蛋白编码,已发现这种基因。 [由RefSeq的,2010年9月提供]

GGPS1基因的碱基序列:[NCBI]
GGPS1基因的碱基突变:           显示全部snp
rs3806393       rs3806394       rs3840451       rs3840452       rs6661528       rs6685307       rs11548110       rs12044028       rs61836173       rs72758083       rs74469033       rs77130406       rs78646791       rs113261276       rs113531328       rs115367910       rs139681730       rs140788687       rs141374511       rs142506535       rs142845492       rs144518982       rs146952998       rs147822910       rs148679342       rs149765090       rs150077224       rs150964907       rs182351087       rs182625746       rs185107444       rs186681480       rs188827837       rs188829557       rs190874129       rs192375714       rs192902443      
rs367815095       rs368044621       rs368428441       rs368542599       rs370299979       rs371569449       rs372153494       rs373779516       rs373961083       rs376818385       rs527441693       rs527576120       rs528756062       rs529247310       rs529367312       rs529924190       rs531084707       rs531551822       rs533445894       rs533632778       rs533949847       rs535062965       rs535399488       rs535644550       rs537222497       rs537333344       rs537882827       rs537936467       rs539028753       rs539993340       rs540260881       rs541467277       rs542052087       rs543836011       rs544337391       rs545519635       rs545558105       rs545692707       rs547578751       rs549431109       rs549609801       rs550024832       rs551990849       rs552191939       rs553401324       rs553401871       rs554462520       rs554651962       rs555392616       rs555881958       rs556339733       rs557391712       rs557963328       rs558513587       rs559922277       rs560077534       rs560422573       rs561927524       rs562400395       rs563153181       rs563737324       rs564073747       rs565483859       rs566183794       rs566423975       rs566629257       rs567914165       rs568426731       rs568568010       rs569754229       rs570332214       rs570392656       rs570518660       rs571931158       rs572038480       rs572760299       rs573866806       rs574435435       rs574514094       rs576234143       rs576913752       rs578040149       rs746707767       rs748742224       rs755953009       rs756645728       rs760290914       rs761878399       rs763736664       rs764874176       rs766621882       rs771808567       rs773689204       rs777939427       rs781395453       rs1048269       rs1987092       rs2789366       rs2789367       rs2789368       rs2789369       rs2789370       rs2803841       rs2803847       rs2803848       rs2803849       rs2803850       rs2803851       rs3841735       rs5781827       rs5781828       rs6665100       rs6666531       rs6684822       rs6699644       rs6701259       rs7541180       rs10754614       rs10802624       rs10925482       rs12095966       rs12096792       rs12562312       rs12730441       rs12757645       rs16832565       rs16832568       rs34021250       rs34043751       rs34532438       rs34560436       rs35356328       rs35948736       rs57328330       rs57621540       rs59003657       rs59063598       rs59148160       rs59406951       rs59540354       rs60225479       rs60459599       rs61836174       rs71172302       rs71174404       rs71174405       rs71640634       rs72758085       rs72758087       rs72758088       rs72758092       rs73114662       rs74148482       rs74148483       rs74148484       rs74612557       rs75091509       rs75150587       rs75586277       rs76301500       rs76362749       rs76729995       rs76872048       rs77160271       rs77208795       rs77618656       rs78397338       rs78846778       rs78953753       rs79213179       rs79304567       rs79784393       rs80115969       rs80291043       rs111374306       rs111938404       rs111991595       rs112155157       rs112304451       rs112503883       rs112518997       rs112732841       rs112819918       rs113092325       rs113129296       rs113338789       rs113636540       rs113744670       rs113829922       rs114208397       rs114520938       rs114718090       rs114880700       rs115003410       rs115629011       rs115804490       rs116088703       rs116161971       rs116222647       rs116703788       rs138182195       rs138366208       rs138383967       rs138463872       rs138851336       rs138892802       rs139019369       rs139159098       rs139483230       rs139591566       rs139641400       rs139730129       rs139918965       rs140254218       rs140301871       rs140568502       rs140732426       rs140794174       rs141430544       rs141445197       rs141472002       rs142138814       rs142244544       rs142506535       rs142513218       rs142694951       rs142987764       rs143416486       rs143861876       rs143922154       rs143971904       rs144045699       rs144350828       rs144739675       rs144864866       rs144977996       rs145008761       rs145879826       rs146248732       rs146353393       rs146421372       rs146426769       rs146703733       rs146838609       rs147202180       rs147246604       rs147251144       rs147435439       rs147439806       rs147721869       rs148006750       rs148347965       rs148659043       rs148735393       rs149046926       rs149179399       rs149688995       rs149847062       rs149923528       rs150234060       rs150561720       rs150811484       rs151140932       rs180689065       rs180904630       rs181181101       rs181752518       rs181862923       rs182060359       rs182074882       rs182720092       rs182829142       rs182895574       rs183183712       rs183199445       rs183463234       rs183521058       rs183716560       rs183731563       rs184283924       rs184506347       rs184666215       rs184746110       rs184808976       rs185062404       rs185069463       rs185304380       rs185456248       rs185961345       rs186018196       rs186222470       rs186382599       rs186437427       rs186747001       rs186815317       rs186839031       rs187792212       rs187814093       rs188006061       rs188085695       rs188566661       rs188998883       rs189016547       rs189272734       rs189645481       rs189665461       rs189820117       rs189876160       rs189888647       rs190483209       rs190706591       rs190857827       rs191123822       rs191277430       rs191289193       rs191291907       rs191550055       rs192187709       rs192501895       rs192826250       rs192915065       rs193219734       rs200207906       rs200486347       rs200524254       rs201516743       rs201678999       rs202228389       rs367703615       rs369127882       rs369809255       rs370933233       rs371055539       rs371654078       rs372026861       rs372512384       rs372938707       rs373087303       rs373200067       rs373685421       rs373688757       rs373903160       rs374597891       rs375238066       rs376310358       rs376480594       rs376621224       rs376933183       rs377445891       rs397983317       rs397983318       rs527634771       rs527729731       rs527778496       rs527911633       rs528381024       rs528849625       rs528926096       rs528988487       rs529051266       rs529547495       rs529616743       rs529945211       rs529975254       rs530142569       rs530622235       rs530628586       rs530763302       rs530827628       rs531182139       rs531234300       rs531603700       rs531702091       rs531847081       rs532345465       rs532352518       rs532720716       rs532747495       rs532818053       rs532882067       rs532916278       rs533187177       rs533520208       rs533659361       rs533672018       rs533752404       rs534021754       rs534094865       rs534372014       rs534434138       rs534779804       rs535049195       rs535183906       rs535252902       rs535308591       rs535982364       rs536164107       rs536225474       rs536234100       rs536294921       rs536494471       rs536759823       rs536818428       rs536885729       rs537210968       rs537240099       rs537363249       rs537419339       rs537482436       rs537548544       rs537688782       rs537822804       rs538323486       rs538459851       rs538619678       rs538758368       rs539124231       rs539283384       rs540030811       rs540128202       rs540200740       rs540467507       rs540474200       rs540529895       rs540529992       rs540666271       rs541066277       rs541596886       rs541606731       rs541686720       rs541740585       rs542234997       rs542654193       rs542763741       rs542837262       rs542868262       rs542933994       rs543130968       rs543498737       rs543784746       rs543979109       rs544053475       rs544194026       rs544727693       rs544901600       rs545038196       rs545138920       rs545259806       rs545571064       rs545697654       rs545862870       rs545899608       rs545925396       rs546165337       rs546336836       rs546675662       rs546834485       rs546887437       rs546929655       rs547137444       rs547170190       rs547567975       rs547989527       rs548069031       rs548125375       rs548160456       rs548293251       rs548949230       rs549180730       rs549222365       rs549315773       rs549358997       rs549744420       rs550061926       rs550207354       rs550515508       rs550550968       rs550559638       rs550689043       rs550696048       rs550768116       rs550874789       rs551084089       rs551151030       rs551303405       rs551505741       rs551738354       rs551812048       rs552128994       rs552265994       rs552414556       rs552602575       rs552696502       rs553403376       rs553468287       rs553538395       rs553818144       rs554720450       rs554733898       rs554741342       rs554813790       rs554876848       rs555738772       rs555797158       rs555882332       rs555934317       rs556002866       rs556689839       rs556863425       rs557001525       rs557003076       rs557138102       rs557145379       rs557208462       rs557321054       rs557734013       rs557930101       rs558003753       rs558137106       rs558395763       rs558586779       rs558794991       rs558959410       rs559161715       rs559168805       rs559230194       rs559311404       rs559438910       rs559834525       rs559858453       rs559999785       rs560040364       rs560610634       rs560654201       rs560669424       rs560928171       rs560928487       rs561211335       rs561274646       rs561286312       rs561397511       rs561523297       rs561924545       rs562135993       rs562176347       rs562276723       rs562413233       rs562440505       rs562552076       rs562830274       rs563010120       rs563205659       rs563428831       rs563595906       rs563914448       rs564115709       rs564331232       rs564584937       rs564647397       rs564935057       rs565151826       rs565164591       rs565209625       rs565230239       rs565347689       rs565556878       rs565559798       rs566340695       rs566360096       rs566360861       rs566424069       rs566539217       rs566745709       rs567006976       rs567435747       rs567719619       rs567801408       rs567854180       rs568563325       rs568660091       rs568775166       rs568833751       rs568915238       rs569049804       rs569239439       rs569276715       rs569876634       rs569892885       rs570297631       rs570839418       rs570974638       rs571167040       rs571548634       rs571614886       rs571634448       rs572297756       rs572751726       rs572836045       rs572966375       rs572981753       rs572987078       rs573198257       rs573449151       rs573836263       rs574044374       rs574107770       rs574170350       rs574170943       rs574316120       rs574378447       rs574536547       rs574821998       rs575262205       rs575335815       rs575410470       rs575531650       rs575536469       rs575671266       rs575688466       rs575810377       rs576374601       rs576465655       rs576844280       rs576985677       rs577102846       rs577150942       rs577448773       rs577523097       rs577915547       rs578079055       rs578201557       rs745359673       rs745839509       rs746434869       rs746710961       rs746811835       rs747188321       rs747342401       rs747726148       rs748831293       rs749152724       rs749361864       rs749914612       rs750410294       rs750841149       rs751536273       rs751563825       rs751772310       rs752393900       rs752558384       rs752833128       rs753478069       rs753521764       rs753527137       rs753681714       rs753701832       rs754004841       rs754548777       rs755731101       rs755843829       rs756368919       rs756527310       rs757078597       rs757137456       rs757142802       rs757273073       rs757507412       rs757878362       rs757966407       rs758272142       rs758315333       rs758512694       rs758770253       rs759493377       rs759794514       rs759817525       rs760322851       rs760735057       rs760775656       rs760862827       rs761397259       rs761522290       rs761599178       rs761955192       rs762709232       rs762730649       rs762938974       rs763095034       rs763463701       rs763731127       rs763933452       rs764010395       rs764128278       rs764662240       rs764828996       rs765085239       rs765639760       rs765969703       rs766616817       rs766714360       rs767359860       rs767426473       rs767599019       rs767787659       rs767799955       rs768316629       rs768613141       rs768896505       rs769022008       rs769112774       rs769794626       rs769992426       rs770141483       rs770150533       rs770636401       rs770864603       rs771086310       rs771801184       rs772423462       rs772582396       rs772724249       rs772957103       rs773173269       rs773181971       rs773758872       rs773826312       rs774596015       rs774733890       rs775214673       rs775558929       rs775758285       rs775784175       rs775837661       rs776210182       rs777335769       rs777830425       rs777865527       rs778789384       rs778802136       rs779117715       rs779486773       rs779645242       rs779823837       rs779849943       rs780515717       rs780520761       rs780868928       rs781544461      

GGPS1基因在不同组织中的表达:    [UniProt]

基因在不同组织中的表达图
正向引物序列
正向引物Tm值
反向引物序列
反向引物Tm值
rank
TATCATCGTTGAACTGCGG
58
TGAAGCGCATACTGAATCC
58
CAGTTACCAGGTAAACAAGTGAG
59
CTGTAGCTTGTCCTCTGGA
58
CGTTGAACTGTAAACAAGTGAG
58
GATGAGTAAACTGGCATTATGC
58
TGGAGAAGACTCAAGAAACAG
58
TCACTTGTTTACCTGGTAACTG
58
TCATCGTTGAACTCAATGGGA
60
CAGGGATGACATTCCAATCG
59
TGGAGAAGACTCAAGAAACAG
58
TCACTTGTTTACCTGGTAACTG
58
GGAGAAGACTCAAGAAACAGTC
59
CTCACTTGTTTACCTGGTAACTG
59
CAGTTACCAGGTAAACAAGTGAG
59
CTGTAGCTTGTCCTCTGGA
58
CAGTTACCAGGTAAACAAGTGAG
59
CTGTAGCTTGTCCTCTGGA
58
GGAGAAGACTCAAGAAACAGTC
59
CTCACTTGTTTACCTGGTAACTG
59
      尚未收录相关数据

GGPS1基因(以及对应的蛋白质)的细胞分布位置:

[UniProt]     [GenomeNet]

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
  • 溶酶体
  • 内涵体
  • 细胞核
  • 细胞质
  • 液泡
  • 细胞膜
  • 细胞外基质
  • 内质网
  • 线粒体
  • 高尔基体
  • 细胞骨架

GGPS1基因的本体(GO)信息:

GO库代码
对应的蛋白质
来源代码
GO:0008299
C9J6G3(UniProtKB)
IEA
GO:0016740
C9J6G3(UniProtKB)
IEA
GO:0008299
C9J7M1(UniProtKB)
IEA
GO:0016740
C9J7M1(UniProtKB)
IEA
GO:0004161
O95749(UniProtKB)
TAS
GO:0004311
O95749(UniProtKB)
IDA
GO:0004311
O95749(UniProtKB)
IDA
GO:0004337
O95749(UniProtKB)
TAS
GO:0005515
O95749(UniProtKB)
IPI
GO:0005829
O95749(UniProtKB)
TAS
GO:0005829
O95749(UniProtKB)
TAS
GO:0005829
O95749(UniProtKB)
TAS
GO:0006695
O95749(UniProtKB)
TAS
GO:0006720
O95749(UniProtKB)
IDA
GO:0033384
O95749(UniProtKB)
IEA
GO:0033386
O95749(UniProtKB)
IEA
GO:0045337
O95749(UniProtKB)
IEA
GO:0046872
O95749(UniProtKB)
IEA
基因与其他基因之间的相互作用关系图
序号 作用方式 资源库来源/分值 基因名称 基因名称

可能调控GGPS1基因的相关microRNA:     


通路基因列表
疾病名称 关系值 NofPmids NofSnps 来源
疾病名称 关系值 NofPmids NofSnps 来源
Colorectal Carcinoma 0.000271442 1 0 BeFree
Hyperinsulinism 0.000271442 1 0 BeFree
Liver Cirrhosis 0.000271442 1 0 BeFree
Liver neoplasms 0.000271442 1 0 BeFree
Osteoporosis 0.000271442 1 0 BeFree
Liver and Intrahepatic Biliary Tract Carcinoma 0.000271442 1 0 BeFree
Malignant neoplasm of liver 0.000271442 1 0 BeFree
Colorectal Cancer 0.000271442 1 0 BeFree
Cirrhosis 0.000271442 1 0 BeFree
Liver carcinoma 0.000271442 1 0 BeFree
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