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Targeted DNA-seq of Human HepG2 cells following editing with CRISPR/Cas9 upon...

样本量:30 物种:Homo sapiens 类型:DNA-seq 2018年12月13日

...CRISPR/Cas9 activity and the induced indel profiles. We used two different doses of Trichostatin and two different doses...

Deep sequencing data for PAM-SCANR tested CRISPR-Cas systems

样本量:14 物种:Bacillus halodurans, Escherichia coli... 类型:other 2016年2月17日

...CRISPR-Cas systems: E. coli I-E, B. halodurans I-C, S. thermophilus CR1 II-A, and F. novicida V. Cells containing functi...

ATAC-seq of human lymphoblastoid cells (LCL)

样本量:54 物种:Homo sapiens 类型:ATAC-seq 2017年2月28日

...CRISPR/Cas9 and 100 gRNAs targeting mtDNA. The other was the removal of detergent from the cell lysis step. There are 27...

Genome-wide CRISPR knockout screen in Huh7.5.1 human hepatocytes for the iden...

样本量:4 物种:Homo sapiens 类型:genotyping by high throughput sequencing 2020年1月19日

...CRISPR library (GeCKOv2, Addgene #1000000049) and subjected to hepatitis A virus infection (HM175/18f) to isolate virus-...

Transcriptome analysis of ATRX and DAXX knockout mouse ESC

样本量:3 物种:Mus musculus 类型:RNA-seq of coding RNA 2015年10月26日

PolyA+ RNA-Seq was performed on wildtype, ATRX and DAXX knockout cells derived by CRISPR targeting (Sadic et. al, EMBO R...

Genome-wide CRISPR-Cas9 screen identifies protein-coding genes and microRNAs ...

样本量:6 物种:Homo sapiens 类型:RNA-seq of coding RNA, RNA-seq of non... 2016年7月1日

The functional relevance of many microRNAs in the context of tumor biology remains unclear. Using CRISPR-Cas9 technology...

Multiplexed activation of endogenous genes by CRISPR-on, an RNA-guided transc...

样本量:3 物种:Homo sapiens 类型:transcription profiling by array 2013年8月10日

...CRISPR-on system, a two-component transcriptional activator consisting of a nuclease-dead Cas9 (dCas9) protein fused wit...

3prime RNA-seq of murine SCLC cell line modified with CRISPR-activation of My...

样本量:12 物种:Mus musculus 类型:RNA-seq of coding RNA 2019年7月9日

...CRISPR activation. Cells were first stably transfected with the lenti-MS2-p65-HSF1 activator plasmid. Respective sgRNAs ...

Inhibition of uPA expression by CRISPR-dCas9 DNA methyltransferases

样本量:5 物种:Homo sapiens 类型:RNA-seq of coding RNA 2016年6月1日

...CRISPR-dCas9 DNA methyltransferases to mediate targeted DNA methylation. Using the dCas9-BFP-DNMT3A and dCas9-BFP-DNMT3B...

Genome-Wide Specificity of DNA-Binding, Gene Regulation, and Chromatin Remode...

样本量:15 物种:Homo sapiens 类型:ChIP-seq 2015年4月24日

...CRISPR- and TALE-based genome engineering tools. We have analyzed the genome-wide effects of TALE- and CRISPR-based tran...

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