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PMID: 9524117 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Distinct Rab-binding domains mediate the interaction of Rabaptin-5 with GTP-bound Rab4 and Rab5.

The EMBO journal ·Vol. 17 ·No. 7 ·1998-04-01 ·Pages 1941-51

Vitale G, Rybin V, Christoforidis S, Thornqvist P, McCaffrey M, Stenmark H, Zerial M

Abstract

Rabaptin-5 functions as an effector for the small GTPase Rab5, a regulator of endocytosis and early endosome fusion. We have searched for structural determinants that confer functional specificity on Rabaptin-5. Here we report that native cytosolic Rabaptin-5 is present in a homodimeric state and dimerization depends upon the presence of its coiled-coil predicted sequences. A 73 residue C-terminal region of Rabaptin-5 is necessary and sufficient both for the interaction with Rab5 and for Rab5-dependent recruitment of the protein on early endosomes. Surprisingly, we uncovered the presence of an additional Rab-binding domain at the N-terminus of Rabaptin-5. This domain mediates the direct interaction with the GTP-bound form of Rab4, a small GTPase that has been implicated in recycling from early endosomes to the cell surface. Based on these results, we propose that Rabaptin-5 functions as a molecular linker between two sequentially acting GTPases to coordinate endocytic and recycling traffic.

MeSH Terms
Amino Acid Sequence Animals Cattle Cell Line Cricetinae Cytosol/chemistry Dimerization Endosomes/metabolism GTP-Binding Proteins/analysis,metabolism Guanosine Triphosphate/metabolism HeLa Cells Humans Membrane Proteins/analysis,chemistry,genetics,metabolism Molecular Sequence Data Protein Binding Protein Structure, Secondary Recombinant Fusion Proteins Sequence Alignment Vesicular Transport Proteins rab4 GTP-Binding Proteins rab5 GTP-Binding Proteins
Chemicals
Membrane Proteins RABEP1 protein, human Recombinant Fusion Proteins Vesicular Transport Proteins Guanosine Triphosphate GTP-Binding Proteins rab4 GTP-Binding Proteins rab5 GTP-Binding Proteins
Authors & Affiliations
7 authors, click to expand affiliations / ORCID
Vitale G
European Molecular Biology Laboratory, Postfach 10.2209, D-69012 Heidelberg, Germany.
Rybin V
Christoforidis S
Thornqvist P
McCaffrey M
Stenmark H
Zerial M
References (37)
37 references, click to expand
  1. Determination of the helix and beta form of proteins in aqueous solution by circular dichroism.
    Biochemistry. 1974 Jul 30;13(16):3350-9 PMID: 4366945
  2. Two distinct effectors of the small GTPase Rab5 cooperate in endocytic membrane fusion.
    EMBO J. 1998 Apr 1;17(7):1930-40 PMID: 9524116
  3. Myosin.
    Annu Rev Biochem. 1984;53:35-73 PMID: 6383197
  4. Homologies in both primary and secondary structure between nuclear envelope and intermediate filament proteins.
    Nature. 1986 Feb 6-12;319(6053):463-8 PMID: 3453101
  5. Four additional members of the ras gene superfamily isolated by an oligonucleotide strategy: molecular cloning of YPT-related cDNAs from a rat brain library.
    Proc Natl Acad Sci U S A. 1987 Dec;84(23):8210-4 PMID: 3317403
  6. High efficiency transformation of intact yeast cells using single stranded nucleic acids as a carrier.
    Curr Genet. 1989 Dec;16(5-6):339-46 PMID: 2692852
  7. Localization of low molecular weight GTP binding proteins to exocytic and endocytic compartments.
    Cell. 1990 Jul 27;62(2):317-29 PMID: 2115402
  8. Expression of chicken lamin B2 in Escherichia coli: characterization of its structure, assembly, and molecular interactions.
    J Cell Biol. 1991 May;113(3):485-95 PMID: 2016332
  9. The small GTP-binding protein rab4 is associated with early endosomes.
    Proc Natl Acad Sci U S A. 1991 Jul 15;88(14):6313-7 PMID: 1906178
  10. Hypervariable C-terminal domain of rab proteins acts as a targeting signal.
    Nature. 1991 Oct 24;353(6346):769-72 PMID: 1944536
  11. The small GTPase rab5 functions as a regulatory factor in the early endocytic pathway.
    Cell. 1992 Sep 4;70(5):715-28 PMID: 1516130
  12. The small GTP-binding protein rab4 controls an early sorting event on the endocytic pathway.
    Cell. 1992 Sep 4;70(5):729-40 PMID: 1516131
  13. Rab9 functions in transport between late endosomes and the trans Golgi network.
    EMBO J. 1993 Feb;12(2):677-82 PMID: 8440258
  14. Rab17, a novel small GTPase, is specific for epithelial cells and is induced during cell polarization.
    J Cell Biol. 1993 May;121(3):553-64 PMID: 8486736
  15. Mammalian Ras interacts directly with the serine/threonine kinase Raf.
    Cell. 1993 Jul 16;74(1):205-14 PMID: 8334704
  16. Green fluorescent protein as a marker for gene expression.
    Science. 1994 Feb 11;263(5148):802-5 PMID: 8303295
  17. Distinct structural elements of rab5 define its functional specificity.
    EMBO J. 1994 Feb 1;13(3):575-83 PMID: 8313902
  18. Molecular cloning and subcellular localization of three GTP-binding proteins of the rab subfamily.
    J Cell Sci. 1993 Dec;106 ( Pt 4):1249-61 PMID: 8126105
  19. Inhibition of rab5 GTPase activity stimulates membrane fusion in endocytosis.
    EMBO J. 1994 Mar 15;13(6):1287-96 PMID: 8137813
  20. In migrating fibroblasts, recycling receptors are concentrated in narrow tubules in the pericentriolar area, and then routed to the plasma membrane of the leading lamella.
    J Cell Biol. 1994 Jun;125(6):1265-74 PMID: 7515888
  21. Mechanisms of intracellular protein transport.
    Nature. 1994 Nov 3;372(6501):55-63 PMID: 7969419
  22. Rab GTPases: master regulators of membrane trafficking.
    Curr Opin Cell Biol. 1994 Aug;6(4):522-6 PMID: 7986528
  23. Evidence for nonvectorial, retrograde transferrin trafficking in the early endosomes of HEp2 cells.
    J Cell Biol. 1995 Feb;128(4):549-61 PMID: 7860630
  24. Predicting coiled coils by use of pairwise residue correlations.
    Proc Natl Acad Sci U S A. 1995 Aug 29;92(18):8259-63 PMID: 7667278
  25. Membrane transport in the endocytic pathway.
    Curr Opin Cell Biol. 1995 Aug;7(4):552-63 PMID: 7495576
  26. Expression of Rab GTPases using recombinant vaccinia viruses.
    Methods Enzymol. 1995;257:155-64 PMID: 8583918
  27. Stage-specifically expressed genes of Angiostrongylus cantonensis: identification by differential display.
    Mol Biochem Parasitol. 1995 May;71(2):285-9 PMID: 7477114
  28. Rabaptin-5 is a direct effector of the small GTPase Rab5 in endocytic membrane fusion.
    Cell. 1995 Nov 3;83(3):423-32 PMID: 8521472
  29. Rab4 and cellubrevin define different early endosome populations on the pathway of transferrin receptor recycling.
    Proc Natl Acad Sci U S A. 1996 Sep 3;93(18):9559-64 PMID: 8790369
  30. GTPase activity of Rab5 acts as a timer for endocytic membrane fusion.
    Nature. 1996 Sep 19;383(6597):266-9 PMID: 8805704
  31. Coiled coils: new structures and new functions.
    Trends Biochem Sci. 1996 Oct;21(10):375-82 PMID: 8918191
  32. Rab11 regulates recycling through the pericentriolar recycling endosome.
    J Cell Biol. 1996 Nov;135(4):913-24 PMID: 8922376
  33. Endocytosis and molecular sorting.
    Annu Rev Cell Dev Biol. 1996;12:575-625 PMID: 8970738
  34. The diversity of Rab proteins in vesicle transport.
    Curr Opin Cell Biol. 1997 Aug;9(4):496-504 PMID: 9261061
  35. A novel Rab5 GDP/GTP exchange factor complexed to Rabaptin-5 links nucleotide exchange to effector recruitment and function.
    Cell. 1997 Sep 19;90(6):1149-59 PMID: 9323142
  36. Cleavage of rabaptin-5 blocks endosome fusion during apoptosis.
    EMBO J. 1997 Oct 15;16(20):6182-91 PMID: 9321397
  37. Yeast promoters and lacZ fusions designed to study expression of cloned genes in yeast.
    Methods Enzymol. 1983;101:181-91 PMID: 6310321
Article Info
Journal
The EMBO journal
Abbr.
EMBO J
ISSN
0261-4189
Published
1998-04-01
Pages
1941-51
Language
English
Region
England
NLM ID
8208664
PMCID
PMC1170540
Subset
IM
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