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PMID: 9488434 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

The Saccharomyces cerevisiae RAD9 checkpoint reduces the DNA damage-associated stimulation of directed translocations.

Molecular and cellular biology ·Vol. 18 ·No. 3 ·1998-03-00 ·Pages 1190-200

Fasullo M, Bennett T, AhChing P, Koudelik J

Abstract

Genetic instability in the Saccharomyces cerevisiae rad9 mutant correlates with failure to arrest the cell cycle in response to DNA damage. We quantitated the DNA damage-associated stimulation of directed translocations in RAD9+ and rad9 mutants. Directed translocations were generated by selecting for His+ prototrophs that result from homologous, mitotic recombination between two truncated his3 genes, GAL1::his3-delta5' and trp1::his3-delta3'::HOcs. Compared to RAD9+ strains, the rad9 mutant exhibits a 5-fold higher rate of spontaneous, mitotic recombination and a greater than 10-fold increase in the number of UV- and X-ray-stimulated His+ recombinants that contain translocations. The higher level of recombination in rad9 mutants correlated with the appearance of nonreciprocal translocations and additional karyotypic changes, indicating that genomic instability also occurred among non-his3 sequences. Both enhanced spontaneous recombination and DNA damage-associated recombination are dependent on RAD1, a gene involved in DNA excision repair. The hyperrecombinational phenotype of the rad9 mutant was correlated with a deficiency in cell cycle arrest at the G2-M checkpoint by demonstrating that if rad9 mutants were arrested in G2 before irradiation, the numbers both of UV- and gamma-ray-stimulated recombinants were reduced. The importance of G2 arrest in DNA damage-induced sister chromatid exchange (SCE) was evident by a 10-fold reduction in HO endonuclease-induced SCE and no detectable X-ray stimulation of SCE in a rad9 mutant. We suggest that one mechanism by which the RAD9-mediated G2-M checkpoint may reduce the frequency of DNA damage-induced translocations is by channeling the repair of double-strand breaks into SCE.

MeSH Terms
Cell Cycle Proteins Chromosomes, Fungal DNA Damage DNA, Fungal/radiation effects Deoxyribonucleases, Type II Site-Specific/metabolism Fungal Proteins/genetics,metabolism Mitosis Nocodazole/pharmacology Polymorphism, Genetic Recombination, Genetic Saccharomyces cerevisiae/genetics,metabolism,radiation effects Saccharomyces cerevisiae Proteins Signal Transduction Translocation, Genetic Ultraviolet Rays X-Rays
Chemicals
Cell Cycle Proteins DNA, Fungal Fungal Proteins Saccharomyces cerevisiae Proteins rad9 protein HO protein, S cerevisiae SCEI protein, S cerevisiae Deoxyribonucleases, Type II Site-Specific Nocodazole
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Fasullo M
Department of Biochemistry and Molecular Biology, The Albany Medical College, New York 12208-3479, USA. mfasullo@ccgateway.amc.edu
Bennett T
AhChing P
Koudelik J
References (68)
68 references, click to expand
  1. Replacement of chromosome segments with altered DNA sequences constructed in vitro.
    Proc Natl Acad Sci U S A. 1979 Oct;76(10):4951-5 PMID: 388424
  2. Separation of yeast chromosome-sized DNAs by pulsed field gradient gel electrophoresis.
    Cell. 1984 May;37(1):67-75 PMID: 6373014
  3. A 24-base-pair DNA sequence from the MAT locus stimulates intergenic recombination in yeast.
    Proc Natl Acad Sci U S A. 1986 Oct;83(20):7831-5 PMID: 3020559
  4. A defect in mismatch repair in Saccharomyces cerevisiae stimulates ectopic recombination between homeologous genes by an excision repair dependent process.
    Genetics. 1990 Nov;126(3):535-47 PMID: 2249754
  5. RAD9, RAD17, and RAD24 are required for S phase regulation in Saccharomyces cerevisiae in response to DNA damage.
    Genetics. 1997 Jan;145(1):45-62 PMID: 9017389
  6. Lethality induced by a single site-specific double-strand break in a dispensable yeast plasmid.
    Proc Natl Acad Sci U S A. 1993 Jun 15;90(12):5613-7 PMID: 8516308
  7. Radiosensitivity in ataxia-telangiectasia: anomalies in radiation-induced cell cycle delay.
    Int J Radiat Biol. 1994 Feb;65(2):175-84 PMID: 7907115
  8. Life with 6000 genes.
    Science. 1996 Oct 25;274(5287):546, 563-7 PMID: 8849441
  9. Mitotic recombination: mismatch correction and replicational resolution of Holliday structures formed at the two strand stage in Saccharomyces.
    Mol Gen Genet. 1981;183(2):252-63 PMID: 7035826
  10. The distribution of the numbers of mutants in bacterial populations.
    J Genet. 1949 Dec;49(3):264-85 PMID: 24536673
  11. A physical comparison of chromosome III in six strains of Saccharomyces cerevisiae.
    Yeast. 1994 Jan;10(1):39-57 PMID: 8203151
  12. DNA-damaging agents stimulate the formation of directed reciprocal translocations in Saccharomyces cerevisiae.
    Mutat Res. 1994 Mar;314(2):121-33 PMID: 7510362
  13. Simultaneous detection of changes in chromosome number, gene conversion and intergenic recombination during mitosis of Saccharomyces cerevisiae: spontaneous and ultraviolet light induced events.
    Curr Genet. 1982 Oct;6(1):5-11 PMID: 24186363
  14. Recombination of Ty elements in yeast can be induced by a double-strand break.
    Genetics. 1995 May;140(1):67-77 PMID: 7635309
  15. Physical mapping of large DNA by chromosome fragmentation.
    Proc Natl Acad Sci U S A. 1988 Aug;85(16):6027-31 PMID: 3045811
  16. Recombinational substrates designed to study recombination between unique and repetitive sequences in vivo.
    Proc Natl Acad Sci U S A. 1987 Sep;84(17):6215-9 PMID: 3306671
  17. Altered cell cycle arrest and gene amplification potential accompany loss of wild-type p53.
    Cell. 1992 Sep 18;70(6):923-35 PMID: 1356076
  18. RAD9-dependent G1 arrest defines a second checkpoint for damaged DNA in the cell cycle of Saccharomyces cerevisiae.
    Proc Natl Acad Sci U S A. 1993 Sep 1;90(17):7985-9 PMID: 8367452
  19. Cloning and sequence analysis of the Saccharomyces cerevisiae RAD9 gene and further evidence that its product is required for cell cycle arrest induced by DNA damage.
    Mol Cell Biol. 1989 May;9(5):1882-96 PMID: 2664461
  20. UV mutagenesis in radiation-sensitive strains of yeast.
    Genetics. 1976 Feb;82(2):207-32 PMID: 770231
  21. The relevance of the nuclear division cycle to radiosensitivity in yeast.
    Mol Gen Genet. 1978 Jul 4;162(3):277-86 PMID: 355834
  22. Genetic and molecular analysis of the GAL3 gene in the expression of the galactose/melibiose regulon of Saccharomyces cerevisiae.
    Genetics. 1986 Jun;113(2):229-46 PMID: 3013721
  23. Molecular cloning and characterization of the RAD1 gene of Saccharomyces cerevisiae.
    Gene. 1983 Dec;26(2-3):119-26 PMID: 6368317
  24. Characterization of RAD9 of Saccharomyces cerevisiae and evidence that its function acts posttranslationally in cell cycle arrest after DNA damage.
    Mol Cell Biol. 1990 Dec;10(12):6554-64 PMID: 2247073
  25. Mitotic checkpoint genes in budding yeast and the dependence of mitosis on DNA replication and repair.
    Genes Dev. 1994 Mar 15;8(6):652-65 PMID: 7926756
  26. Characterization of a B-lymphocyte t(2;14) (p11;q32) translocation from an ataxia telangiectasia patient conferring a proliferative advantage on cells in vitro.
    Cytogenet Cell Genet. 1991;56(2):91-8 PMID: 1901542
  27. Mutational analysis of pre-mRNA splicing in Saccharomyces cerevisiae using a sensitive new reporter gene, CUP1.
    Genetics. 1993 Apr;133(4):851-63 PMID: 8462846
  28. Characterization of G1 checkpoint control in the yeast Saccharomyces cerevisiae following exposure to DNA-damaging agents.
    Genetics. 1994 Oct;138(2):271-81 PMID: 7828811
  29. One-step transformation of yeast in stationary phase.
    Curr Genet. 1992 Jan;21(1):83-4 PMID: 1735128
  30. The RAD9 gene controls the cell cycle response to DNA damage in Saccharomyces cerevisiae.
    Science. 1988 Jul 15;241(4863):317-22 PMID: 3291120
  31. Nucleotide sequence and transcriptional mapping of the yeast pet56-his3-ded1 gene region.
    Nucleic Acids Res. 1985 Dec 9;13(23):8587-601 PMID: 3001645
  32. Yeast checkpoint genes in DNA damage processing: implications for repair and arrest.
    Science. 1995 Dec 1;270(5241):1488-91 PMID: 7491494
  33. Cell cycle arrest of cdc mutants and specificity of the RAD9 checkpoint.
    Genetics. 1993 May;134(1):63-80 PMID: 8514150
  34. Specific cleavage of model recombination and repair intermediates by the yeast Rad1-Rad10 DNA endonuclease.
    Science. 1994 Sep 30;265(5181):2082-5 PMID: 8091230
  35. Spontaneous mitotic recombination in yeast: the hyper-recombinational rem1 mutations are alleles of the RAD3 gene.
    Genetics. 1988 Jun;119(2):289-301 PMID: 2840336
  36. Gene conversion at different points in the mitotic cycle of Saccharomyces cerevisiae.
    Mol Gen Genet. 1984;195(1-2):139-43 PMID: 6387388
  37. Separation of large DNA molecules by contour-clamped homogeneous electric fields.
    Science. 1986 Dec 19;234(4783):1582-5 PMID: 3538420
  38. Cell cycle checkpoints, genetic instability and cancer.
    Semin Cancer Biol. 1993 Apr;4(2):129-40 PMID: 8513148
  39. Gene conversion and associated reciprocal recombination are separable events in vegetative cells of Saccharomyces cerevisiae.
    Proc Natl Acad Sci U S A. 1983 Nov;80(22):6912-6 PMID: 6359159
  40. Detection of specific sequences among DNA fragments separated by gel electrophoresis.
    J Mol Biol. 1975 Nov 5;98(3):503-17 PMID: 1195397
  41. Centromeric DNA from Saccharomyces cerevisiae.
    J Mol Biol. 1982 Jun 25;158(2):157-90 PMID: 6750136
  42. Chromosome end associations, telomeres and telomerase activity in ataxia telangiectasia cells.
    Cytogenet Cell Genet. 1995;71(1):86-93 PMID: 7606935
  43. RAD1, an excision repair gene of Saccharomyces cerevisiae, is also involved in recombination.
    Mol Cell Biol. 1988 Sep;8(9):3619-26 PMID: 3065620
  44. One-step gene disruption in yeast.
    Methods Enzymol. 1983;101:202-11 PMID: 6310324
  45. The product of the HO gene is a nuclease: purification and characterization of the enzyme.
    Cold Spring Harb Symp Quant Biol. 1984;49:89-96 PMID: 6099261
  46. Directionality and regulation of cassette substitution in yeast.
    Cold Spring Harb Symp Quant Biol. 1984;49:97-104 PMID: 6397325
  47. Flow cytometric analysis of X-ray sensitivity in ataxia telangiectasia.
    Mutat Res. 1989 Mar;211(1):31-41 PMID: 2922001
  48. Wild-type p53 restores cell cycle control and inhibits gene amplification in cells with mutant p53 alleles.
    Cell. 1992 Sep 18;70(6):937-48 PMID: 1525830
  49. Loss of a yeast telomere: arrest, recovery, and chromosome loss.
    Cell. 1993 Nov 19;75(4):729-39 PMID: 8242745
  50. On the mechanism of UV and gamma-ray-induced intrachromosomal recombination in yeast cells synchronized in different stages of the cell cycle.
    Mol Gen Genet. 1995 Aug 21;248(3):301-10 PMID: 7565592
  51. The double-strand-break repair model for recombination.
    Cell. 1983 May;33(1):25-35 PMID: 6380756
  52. Replication-dependent sister chromatid recombination in rad1 mutants of Saccharomyces cerevisiae.
    Genetics. 1993 Mar;133(3):469-87 PMID: 8454200
  53. Mating type regulates the radiation-associated stimulation of reciprocal translocation events in Saccharomyces cerevisiae.
    Mol Gen Genet. 1994 Apr;243(1):63-70 PMID: 8190072
  54. Genome rearrangement in top3 mutants of Saccharomyces cerevisiae requires a functional RAD1 excision repair gene.
    Mol Cell Biol. 1992 Nov;12(11):4988-93 PMID: 1328869
  55. Genetic control of intrachromosomal recombination in Saccharomyces cerevisiae. I. Isolation and genetic characterization of hyper-recombination mutations.
    Genetics. 1988 Aug;119(4):779-90 PMID: 3044923
  56. Sister chromatids are preferred over homologs as substrates for recombinational repair in Saccharomyces cerevisiae.
    Genetics. 1992 Oct;132(2):387-402 PMID: 1427035
  57. Functions of microtubules in the Saccharomyces cerevisiae cell cycle.
    J Cell Biol. 1988 Oct;107(4):1409-26 PMID: 3049620
  58. High spontaneous intrachromosomal recombination rates in ataxia-telangiectasia.
    Science. 1993 May 28;260(5112):1327-30 PMID: 8493577
  59. A positive selection for mutants lacking orotidine-5'-phosphate decarboxylase activity in yeast: 5-fluoro-orotic acid resistance.
    Mol Gen Genet. 1984;197(2):345-6 PMID: 6394957
  60. Nonmutagenic carcinogens induce intrachromosomal recombination in yeast.
    Nature. 1989 Jan 19;337(6204):285-8 PMID: 2643057
  61. A physical, genetic and transcriptional map of the cloned his3 gene region of Saccharomyces cerevisiae.
    J Mol Biol. 1980 Jan 25;136(3):309-32 PMID: 6246242
  62. A novel role for the budding yeast RAD9 checkpoint gene in DNA damage-dependent transcription.
    EMBO J. 1996 Aug 1;15(15):3912-22 PMID: 8670896
  63. Removal of nonhomologous DNA ends in double-strand break recombination: the role of the yeast ultraviolet repair gene RAD1.
    Science. 1992 Oct 16;258(5081):480-4 PMID: 1411547
  64. Cell-cycle-specific repair of DNA double strand breaks in Saccharomyces cerevisiae.
    Radiat Res. 1980 Jun;82(3):547-58 PMID: 6992192
  65. Lack of association between intrachromosomal gene conversion and reciprocal exchange.
    Nature. 1984 Aug 30-Sep 5;310(5980):748-53 PMID: 6088989
  66. Direction of chromosome rearrangements in Saccharomyces cerevisiae by use of his3 recombinational substrates.
    Mol Cell Biol. 1988 Oct;8(10):4370-80 PMID: 3054515
  67. Multiple pathways for homologous recombination in Saccharomyces cerevisiae.
    Genetics. 1995 Jan;139(1):45-56 PMID: 7705645
  68. The repair of double-strand breaks in the nuclear DNA of Saccharomyces cerevisiae and its genetic control.
    Mol Gen Genet. 1976 Jan 16;143(2):119-29 PMID: 765749
Article Info
Journal
Molecular and cellular biology
Abbr.
Mol Cell Biol
ISSN
0270-7306
Published
1998-03-00
Pages
1190-200
Language
English
Region
United States
NLM ID
8109087
PMCID
PMC108832
Subset
IM
Grants
NCI NIH HHS · CA70105 · United States
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