Home LiteratureArticle Details
PMID: 3020559 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S.

A 24-base-pair DNA sequence from the MAT locus stimulates intergenic recombination in yeast.

Nickoloff JA, Chen EY, Heffron F

Abstract

HO nuclease is a site-specific double-strand endonuclease present in haploid Saccharomyces cerevisiae undergoing mating type interconversion. HO nuclease initiates mating type interconversion by making a double-strand break within the MAT locus. To define the recognition site for the enzyme in vitro, we have constructed a number of point mutations and deletions within or adjacent to the HO recognition site. Digestion of these substrates with HO in vitro reveals that the minimal recognition site is 18 base pairs long, although several shorter substrates and substrates containing point mutations are cleaved at low levels in vitro. A 24-base-pair HO recognition site stimulates homologous recombination when present in a region unrelated to MAT. Recombinants arise from both gene conversion and crossover events. The identification of the HO recognition site provides a way of introducing a defined initiation site for recombination.

MeSH Terms
Alleles Base Composition Base Sequence Chromosome Mapping DNA Restriction Enzymes DNA, Fungal/analysis Histidine/genetics Recombination, Genetic Saccharomyces cerevisiae/genetics
Chemicals
DNA, Fungal Histidine DNA Restriction Enzymes
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Nickoloff J A
Chen E Y
Heffron F
References (21)
21 references, click to expand
  1. The sequence of the DNAs coding for the mating-type loci of Saccharomyces cerevisiae.
    Cell. 1981 Nov;27(1 Pt 2):15-23 PMID: 7034964
  2. Replacement of chromosome segments with altered DNA sequences constructed in vitro.
    Proc Natl Acad Sci U S A. 1979 Oct;76(10):4951-5 PMID: 388424
  3. Deletions and single base pair changes in the yeast mating type locus that prevent homothallic mating type conversions.
    Proc Natl Acad Sci U S A. 1983 Jun;80(11):3401-5 PMID: 6304708
  4. Gene conversion between duplicated genetic elements in yeast.
    Nature. 1981 Jul 23;292(5821):306-11 PMID: 6265790
  5. Homothallic mating type switching generates lethal chromosome breaks in rad52 strains of Saccharomyces cerevisiae.
    Mol Cell Biol. 1981 Jun;1(6):522-34 PMID: 6765605
  6. Directionality of yeast mating-type interconversion.
    Cell. 1982 Mar;28(3):551-61 PMID: 7042099
  7. Five SWI genes are required for expression of the HO gene in yeast.
    J Mol Biol. 1984 Oct 5;178(4):853-68 PMID: 6436497
  8. The structure of transposable yeast mating type loci.
    Cell. 1980 Mar;19(3):753-64 PMID: 6244896
  9. Fungal recombination.
    Microbiol Rev. 1985 Mar;49(1):33-58 PMID: 3884994
  10. Molecular analysis of a cell lineage.
    Nature. 1983 Apr 21;302(5910):670-6 PMID: 6339953
  11. Homothallic switching of yeast mating type cassettes is initiated by a double-stranded cut in the MAT locus.
    Cell. 1982 Nov;31(1):183-92 PMID: 6297747
  12. Detection of specific sequences among DNA fragments separated by gel electrophoresis.
    J Mol Biol. 1975 Nov 5;98(3):503-17 PMID: 1195397
  13. Structure and organization of transposable mating type cassettes in Saccharomyces yeasts.
    Proc Natl Acad Sci U S A. 1980 May;77(5):2839-43 PMID: 6248870
  14. A CIS-Acting Mutation within the MATa Locus of SACCHAROMYCES CEREVISIAE That Prevents Efficient Homothallic Mating-Type Switching.
    Genetics. 1980 Feb;94(2):341-60 PMID: 17249002
  15. The product of the HO gene is a nuclease: purification and characterization of the enzyme.
    Cold Spring Harb Symp Quant Biol. 1984;49:89-96 PMID: 6099261
  16. The RAD52 gene is required for homothallic interconversion of mating types and spontaneous mitotic recombination in yeast.
    Proc Natl Acad Sci U S A. 1980 Jan;77(1):503-7 PMID: 6987653
  17. Directionality and regulation of cassette substitution in yeast.
    Cold Spring Harb Symp Quant Biol. 1984;49:97-104 PMID: 6397325
  18. Complete nucleotide sequence of the Escherichia coli plasmid pBR322.
    Cold Spring Harb Symp Quant Biol. 1979;43 Pt 1:77-90 PMID: 383387
  19. A site-specific endonuclease essential for mating-type switching in Saccharomyces cerevisiae.
    Cell. 1983 Nov;35(1):167-74 PMID: 6313222
  20. A suppressor of mating-type locus mutations in Saccharomyces cerevisiae: evidence for and identification of cryptic mating-type loci.
    Genetics. 1979 Dec;93(4):877-901 PMID: 397913
  21. Sequencing end-labeled DNA with base-specific chemical cleavages.
    Methods Enzymol. 1980;65(1):499-560 PMID: 6246368
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1986-10-00
Pages
7831-5
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC386816
Subset
IM
Grants
NIGMS NIH HHS · R01 GM33808-1 · United States
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com