Home LiteratureArticle Details
PMID: 8058796 Published · ppublish English Comparative Study Journal Article

Differential expression of mRNAs for JC virus large and small tumor antigens in brain tissues from progressive multifocal leukoencephalopathy patients with and without AIDS.

Ishaq M, Stoner GL

Abstract

JC virus (JCV) causes progressive multifocal leukoencephalopathy (PML), the fatal demyelinating infection of oligodendrocytes, in up to 5% of AIDS patients. An intron-differential RNA PCR was developed to study the expression of alternately spliced JCV early mRNAs in brain tissues from PML patients with and without AIDS and in JCV-induced hamster brain tumors. The method utilizes primers that span the large tumor (T) and small tumor (t) antigen introns allowing amplification of specific cDNAs in the presence of contaminating viral genomic DNA. Hybridization with specific junctional probes and DNA sequence analysis confirmed the identity of the PCR products. Sequencing showed that JCV early mRNA is alternatively spliced as previously predicted by analogy to simian virus 40. Large T antigen mRNA was detected in all the brain tissues from PML patients with and without AIDS. The expression of small t antigen mRNA varied depending upon the association of PML with AIDS and upon other unknown factors. Of the 12 PML/AIDS brain tissue samples, 11 (92%) expressed small t antigen mRNA, whereas only 8 of 13 (62%) brain samples from patients with PML alone showed detectable levels of small t antigen mRNA. Human immunodeficiency virus 1 proviral DNA was detected in 10 of 12 PML/AIDS brain samples. The results indicate that alternative splicing of JCV early mRNA is regulated in the human brain and that the production of small t antigen may not be essential for the pathogenesis of PML.

MeSH Terms
Acquired Immunodeficiency Syndrome/complications Adult Antigens, Viral/biosynthesis Base Sequence Brain/metabolism,microbiology Child Cloning, Molecular DNA Primers DNA, Viral/isolation & purification Exons Female Gene Expression HIV-1/isolation & purification,metabolism Humans JC Virus/genetics,isolation & purification,metabolism Leukoencephalopathy, Progressive Multifocal/complications,metabolism,microbiology Male Middle Aged Molecular Sequence Data Polymerase Chain Reaction Proviruses/isolation & purification,metabolism RNA, Messenger/biosynthesis,isolation & purification Transcription, Genetic
Chemicals
Antigens, Viral DNA Primers DNA, Viral RNA, Messenger
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Ishaq M
Laboratory of Experimental Neuropathology, National Institute of Neurological Disorders and Stroke, National Institutes of Health, Bethesda, MD 20892.
Stoner G L
References (34)
34 references, click to expand
  1. The neurologic complications of human immunodeficiency virus infection.
    Med Clin North Am. 1993 Jan;77(1):1-23 PMID: 8380478
  2. Evidence that a sequence similar to TAR is important for induction of the JC virus late promoter by human immunodeficiency virus type 1 Tat.
    J Virol. 1992 Dec;66(12):7355-61 PMID: 1331525
  3. Human polyomavirus JC promoter/enhancer rearrangement patterns from progressive multifocal leukoencephalopathy brain are unique derivatives of a single archetypal structure.
    J Gen Virol. 1993 Aug;74 ( Pt 8):1499-507 PMID: 8393910
  4. Independent expression of the transforming amino-terminal domain of SV40 large I antigen from an alternatively spliced third SV40 early mRNA.
    EMBO J. 1993 Dec;12(12):4739-46 PMID: 8223482
  5. The interaction of SV40 small tumor antigen with protein phosphatase 2A stimulates the map kinase pathway and induces cell proliferation.
    Cell. 1993 Dec 3;75(5):887-97 PMID: 8252625
  6. Alternative 5' splice site selection induced by heat shock.
    Mol Cell Biol. 1994 Jan;14(1):567-75 PMID: 8264624
  7. Polyomavirus models of brain infection and the pathogenesis of multiple sclerosis.
    Brain Pathol. 1993 Jul;3(3):213-27 PMID: 8293181
  8. Construction and analysis of viable deletion mutants of simian virus 40.
    J Virol. 1976 May;18(2):664-71 PMID: 178902
  9. Spliced early mRNAs of simian virus 40.
    Proc Natl Acad Sci U S A. 1978 Mar;75(3):1274-8 PMID: 206891
  10. Variable defectiveness for lytic growth of the dl 54/59 mutants of simian virus 40.
    J Virol. 1980 Mar;33(3):1208-10 PMID: 6245271
  11. Genomic structure of human polyoma virus JC: nucleotide sequence of the region containing replication origin and small-T-antigen gene.
    J Virol. 1983 Jan;45(1):73-9 PMID: 6296460
  12. Regulatory sequences and virus-cell interactions of JC virus.
    Prog Clin Biol Res. 1983;105:41-59 PMID: 6304771
  13. Human polyomavirus JC virus genome.
    J Virol. 1984 Aug;51(2):458-69 PMID: 6086957
  14. SV40 small t antigen enhances the transformation activity of limiting concentrations of SV40 large T antigen.
    Cell. 1987 Jan 30;48(2):321-30 PMID: 3026642
  15. Factors influencing alternative splice site utilization in vivo.
    Mol Cell Biol. 1987 Feb;7(2):738-48 PMID: 3029566
  16. DNA amplification for direct detection of HIV-1 in DNA of peripheral blood mononuclear cells.
    Science. 1988 Jan 15;239(4837):295-7 PMID: 3336784
  17. trans-activation of RNA polymerase II and III promoters by SV40 small t antigen.
    Cell. 1988 Dec 23;55(6):1171-7 PMID: 3203384
  18. Polyoma small and middle T antigens and SV40 small t antigen form stable complexes with protein phosphatase 2A.
    Cell. 1990 Jan 12;60(1):167-76 PMID: 2153055
  19. Trans-activation of the JC virus late promoter by the tat protein of type 1 human immunodeficiency virus in glial cells.
    Proc Natl Acad Sci U S A. 1990 May;87(9):3479-83 PMID: 2159152
  20. A protein factor, ASF, controls cell-specific alternative splicing of SV40 early pre-mRNA in vitro.
    Cell. 1990 Jul 13;62(1):25-34 PMID: 2163768
  21. The essential pre-mRNA splicing factor SF2 influences 5' splice site selection by activating proximal sites.
    Cell. 1990 Jul 13;62(1):35-42 PMID: 2364434
  22. Regulation of the human neurotropic virus promoter by JCV-T antigen and HIV-1 tat protein.
    Oncogene. 1990 Dec;5(12):1737-42 PMID: 2178236
  23. Control of protein phosphatase 2A by simian virus 40 small-t antigen.
    Mol Cell Biol. 1991 Apr;11(4):1988-95 PMID: 1706474
  24. Dephosphorylation of simian virus 40 large-T antigen and p53 protein by protein phosphatase 2A: inhibition by small-t antigen.
    Mol Cell Biol. 1991 Apr;11(4):1996-2003 PMID: 1848668
  25. The biochemistry of AIDS.
    Annu Rev Biochem. 1991;60:577-630 PMID: 1883204
  26. Pathogenesis and molecular biology of progressive multifocal leukoencephalopathy, the JC virus-induced demyelinating disease of the human brain.
    Clin Microbiol Rev. 1992 Jan;5(1):49-73 PMID: 1310438
  27. Involvement of simian virus 40 (SV40) small t antigen in trans activation of SV40 early and late promoters.
    J Virol. 1992 Mar;66(3):1489-94 PMID: 1310761
  28. Biochemical mechanisms of constitutive and regulated pre-mRNA splicing.
    Annu Rev Cell Biol. 1991;7:559-99 PMID: 1839712
  29. Common and unique features of T antigens encoded by the polyomavirus group.
    J Virol. 1992 Jul;66(7):3979-85 PMID: 1318392
  30. Structure and function of simian virus 40 large tumor antigen.
    Annu Rev Biochem. 1992;61:55-85 PMID: 1323237
  31. JC virus DNA is present in many human brain samples from patients without progressive multifocal leukoencephalopathy.
    J Virol. 1992 Oct;66(10):5726-34 PMID: 1326640
  32. Two major types of JC virus defined in progressive multifocal leukoencephalopathy brain by early and late coding region DNA sequences.
    J Gen Virol. 1992 Oct;73 ( Pt 10):2669-78 PMID: 1328479
  33. Evidence of human polyomavirus BK and JC infection in normal brain tissue.
    Virology. 1992 Nov;191(1):72-80 PMID: 1329338
  34. Human immunodeficiency virus type 1 infection of the nervous system: pathogenetic mechanisms.
    Ann Neurol. 1993 May;33(5):429-36 PMID: 8498818
Article Info
Journal
Proceedings of the National Academy of Sciences of the United States of America
Abbr.
Proc Natl Acad Sci U S A
ISSN
0027-8424
Published
1994-08-16
Pages
8283-7
Language
English
Region
United States
NLM ID
7505876
PMCID
PMC44590
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com