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PMID: 765743 Published · ppublish English Journal Article

The organization of genes in yeast mitochondrial DNA II. The physical map of EcoRI and HindII + III fragments.

Molecular & general genetics : MGG ·Vol. 143 ·No. 1 ·1975-12-30 ·Pages 53-64

Sanders JP, Borst P, Weijers PJ

Abstract

1. We have isolated large fragments of the mtDNA of the yeast Saccharomyces carlsbergensis and digested these with restriction endonucleases. The digestion products were separated by electrophoresis in agarose gels. 2. Endonucleases EcoRI, HindII + III, HpaI, HindIII and HapII yield 9, 11, 6, 0 and greater than 80 fragments, respectively. 3. By analysis of partial digestion products and by redigesting the fragments obtained with one endonuclease with a second, we have established the order of all EcoRI and HindII + III fragments. The map is circular and its contour length is 22.1 +/- 0.35 mum, in good agreement with earlier estimates of the size of yeast mtDNA, using electron microscopy and renaturation kinetics. 4. A comparison of the fragmentation pattern of mtDNAs from S. carlsbergensis and various strains of Saccharomyces cerevisiae with endonuclease HindII + III suggests that the overall gene order is similar.

MeSH Terms
DNA Restriction Enzymes DNA, Circular/analysis DNA, Mitochondrial/analysis Extrachromosomal Inheritance Genes Molecular Weight Nucleic Acid Hybridization Saccharomyces/analysis Saccharomyces cerevisiae/analysis Species Specificity
Chemicals
DNA, Circular DNA, Mitochondrial DNA Restriction Enzymes
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Sanders J P
Borst P
Weijers P J
References (41)
41 references, click to expand
  1. Properties of mitochondrial DNA from Kluyveromyces lactis.
    Biochim Biophys Acta. 1974 Dec 6;374(2):136-44 PMID: 4215460
  2. Detection of two restriction endonuclease activities in Haemophilus parainfluenzae using analytical agarose--ethidium bromide electrophoresis.
    Biochemistry. 1973 Jul 31;12(16):3055-63 PMID: 4354250
  3. Endonuclease R. Hind fragments of T7 DNA.
    Virology. 1974 Mar;58(1):25-31 PMID: 4544986
  4. Role of molecular conformation in determining the electrophoretic properties of polynucleotides in agarose-acrylamide gels. II.
    Biochemistry. 1972 Mar 28;11(7):1242-50 PMID: 4335136
  5. The mitochondrial genome of wild-type yeast cells. II. Investigations on the compositional heterogeneity of mitochondrial DNA.
    J Mol Biol. 1972 Mar 28;65(2):191-205 PMID: 4557189
  6. A new method for isolation of a restriction enzyme from Hemophilus parainfluenzae.
    Biochem Biophys Res Commun. 1974 Jun 4;58(3):586-96 PMID: 4599683
  7. Nucleotide sequences at the cleavage sites of two restriction endonucleases from Hemophilus parainfluenzae.
    Biochem Biophys Res Commun. 1974 Jul 10;59(1):108-16 PMID: 4366956
  8. Polyoma DNA: a physical map.
    Proc Natl Acad Sci U S A. 1974 May;71(5):2077-81 PMID: 4365585
  9. Analysis of endonuclease R-EcoRI fragments of DNA from lambdoid bacteriophages and other viruses by agarose-gel electrophoresis.
    J Virol. 1974 Nov;14(5):1235-44 PMID: 4372397
  10. Mitochondrial nucleic acids in the petite colonie mutants: deletions and repetition of genes.
    Biochimie. 1973;55(6):779-92 PMID: 4589243
  11. Mitochondrial DNA. V. A 25 micron closed circular duplex DNA molecule in wild-type yeast mitochondria. Stucture and genetic complexity.
    Biochim Biophys Acta. 1970 May 21;209(1):1-15 PMID: 5421966
  12. The number of 4-S RNA genes on yeast mitochondrial DNA.
    Biochem Biophys Res Commun. 1972 Apr 14;47(1):126-33 PMID: 4554811
  13. The gel electrophoresis of DNA.
    Biochim Biophys Acta. 1972 May 10;269(2):192-200 PMID: 5063906
  14. A freeze-squeeze method for recovering long DNA from agarose gels.
    Anal Biochem. 1975 May 26;66(1):213-20 PMID: 1096670
  15. Mitochondrial genetics IX: A model for recombination and segregation of mitochondrial genomes in saccharomyces cerevisiae.
    Genetics. 1974 Sep;78(1):415-37 PMID: 4613610
  16. Heterogeneity of mitochondrial DNA from Saccharomyces carlsbergensis: renaturation and sedimentation studies.
    J Mol Biol. 1974 Mar 25;84(1):65-82 PMID: 4830864
  17. The determination of the molecular weight of ribonucleic acid by polyacrylamide-gel electrophresis. The effects of changes in conformation.
    Biochem J. 1969 Jun;113(1):131-8 PMID: 4896715
  18. Kinetics of renaturation of DNA.
    J Mol Biol. 1968 Feb 14;31(3):349-70 PMID: 5637197
  19. DNA of bacteriophage PM2: a closed circular double-stranded molecule.
    Proc Natl Acad Sci U S A. 1969 Aug;63(4):1164-8 PMID: 5260915
  20. Molecular weight estimation and separation of ribonucleic acid by electrophoresis in agarose-acrylamide composite gels.
    Biochemistry. 1968 Feb;7(2):668-74 PMID: 4868544
  21. Hybridization studies with yeast mitochondrial RNAs.
    Biochim Biophys Acta. 1972 Jul 20;272(3):396-407 PMID: 4558935
  22. Size and structure of yeast chromosomal DNA.
    Proc Natl Acad Sci U S A. 1973 Nov;70(11):3072-6 PMID: 4594033
  23. Resolution of multiple ribonucleic acid species by polyacrylamide gel electrophoresis.
    Biochemistry. 1967 Jun;6(6):1818-27 PMID: 6035921
  24. The biogenesis of mitochondria in microorganisms.
    Annu Rev Microbiol. 1972;26:163-98 PMID: 4264317
  25. The organization of genes in yeast mitochondrial DNA. I. The genes for large and small ribosomal RNA are far apart.
    Biochem Biophys Res Commun. 1975 Jul 22;65(2):699-707 PMID: 1148012
  26. Rapid bacteriophage sedimentation in the presence of polyethylene glycol and its application to large-scale virus purification.
    Virology. 1970 Mar;40(3):734-44 PMID: 4908735
  27. Studies on energy-linked reactions: genetic analysis of venturicidin-resistant mutants.
    Eur J Biochem. 1975 Feb 21;51(2):403-13 PMID: 1097243
  28. DNA nucleotide sequence restricted by the RI endonuclease.
    Proc Natl Acad Sci U S A. 1972 Nov;69(11):3448-52 PMID: 4343974
  29. Structure and function of herpesvirus genomes. I. comparison of five HSV-1 and two HSV-2 strains by cleavage their DNA with eco R I restriction endonuclease.
    J Virol. 1975 Apr;15(4):726-32 PMID: 163917
  30. The petite mutation in yeast. 3. Nearest-neighbor analysis of mitochondrial DNA from normal and mutant cells.
    J Mol Biol. 1971 Dec 28;62(3):565-75 PMID: 4944600
  31. Mitochondrial genetics. I. Methodology and phenomenology.
    Symp Soc Exp Biol. 1970;24:449-96 PMID: 5516343
  32. Electron microscopic and renaturation kinetic analysis of mitochondrial DNA of cytoplasmic petite mutants of Saccharomyces cerevisiae.
    J Mol Biol. 1974 Sep 15;88(2):489-507 PMID: 4616091
  33. Role of base composition in the electrophoresis of microbial and crab DNA in polyacrylamide gels.
    Nat New Biol. 1972 Jul 19;238(81):65-9 PMID: 4625705
  34. The mitochondrial genome of wild-type yeast cells. IV. Genes and spacers.
    J Mol Biol. 1974 Jul 15;86(4):825-41 PMID: 4610147
  35. A restriction enzyme from Hemophilus influenzae. II.
    J Mol Biol. 1970 Jul 28;51(2):393-409 PMID: 5312501
  36. Extrachromosomal inheritance of paromomycin resistance in Saccharomyces cerevisiae. Genetic and biochemical characterization of mutants.
    Mol Gen Genet. 1973 Sep 5;125(1):91-8 PMID: 4590265
  37. Mitochondrial nucleic acids.
    Annu Rev Biochem. 1972;41:333-76 PMID: 4563438
  38. DNA sequence restricted by restriction endonuclease AP from Haemophilus aphirophilus.
    Nat New Biol. 1973 Dec 5;246(153):138-40 PMID: 4357389
  39. Cleavage of small bacteriophage and plasmid DNAs by restriction endonucleases.
    Eur J Biochem. 1974 Jun 15;45(2):489-99 PMID: 4604227
  40. Molecular weights of coliphages and coliphage DNA. IV. Molecular weights of DNA from bacteriophages T4, T5 and T7 and the general problem of determination of M.
    J Mol Biol. 1970 Dec 28;54(3):567-77 PMID: 4923669
  41. Recognition sequence of restriction endonuclease III from Hemophilus influenzae.
    J Mol Biol. 1975 Feb 25;92(2):331-9 PMID: 1095757
Article Info
Journal
Molecular & general genetics : MGG
Abbr.
Mol Gen Genet
ISSN
0026-8925
Published
1975-12-30
Pages
53-64
Language
English
Region
Germany
NLM ID
0125036
Subset
IM
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