Abstract
Procedures are described for the detection and isolation of plasmids of various sizes (2.6 to 350 megadaltons) that are harbored in species of Agrobacterium, Rhizobium, Escherichia, Salmonella, Erwinia, Pseudomonas, and Xanthomonas. The method utilized the molecular characteristics of covalently closed circular deoxyribonucleic acid (DNA) that is released from cells under conditions that denature chromosomal DNA by using alkaline sodium dodecyl sulfate (pH 12.6) at elevated temperatures. Proteins and cell debris were removed by extraction with phenol-chloroform. Under these conditions chromosomal DNA concentrations were reduced or eliminated. The clarified extract was used directly for electrophoretic analysis. These procedures also permitted the selective isolation of plasmid DNA that can be used directly in nick translation, restriction endonuclease analysis, transformation, and DNA cloning experiments.
MeSH Terms
Bacteriological Techniques
Bacteriolysis
Cloning, Molecular
DNA, Bacterial/isolation & purification
DNA, Recombinant/isolation & purification
Enterobacteriaceae/genetics
Genetic Techniques
Plasmids
Protein Biosynthesis
Pseudomonadaceae/genetics
Rhizobium/genetics
Chemicals
DNA, Bacterial
DNA, Recombinant
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Kado C I
Liu S T
References (27)
27 references, click to expand
-
A rapid method for the identification of plasmid desoxyribonucleic acid in bacteria.
Plasmid. 1978 Sep;1(4):584-8
PMID: 107540
-
Physical properties and gel electrophoresis behavior of R12-derived plasmid DNAs.
Nucleic Acids Res. 1977;4(5):1465-82
PMID: 331257
-
General method for the isolation of plasmid deoxyribonucleic acid.
J Bacteriol. 1973 Nov;116(2):1064-6
PMID: 4583233
-
Novel screening procedure for recombinant plasmids.
Science. 1977 Jan 28;195(4276):391-3
PMID: 318763
-
A rapid microscale technique for isolation of recombinant plasmid DNA suitable for restriction enzyme analysis.
Plasmid. 1980 Jan;3(1):88-91
PMID: 6278527
-
Simple agarose gel electrophoretic method for the identification and characterization of plasmid deoxyribonucleic acid.
J Bacteriol. 1976 Sep;127(3):1529-37
PMID: 821935
-
Plasmid detection and sizing in single colony lysates.
Science. 1977 Jan 28;195(4276):393-4
PMID: 318764
-
A freeze-squeeze method for recovering long DNA from agarose gels.
Anal Biochem. 1975 May 26;66(1):213-20
PMID: 1096670
-
Plasmid deoxyribonucleic acid in Rhizobium vigna and Rhizobium trifolii.
Biochim Biophys Acta. 1975 Dec 19;414(3):357-61
PMID: 1203260
-
Isolation of large molecular weight DNA from agarose gels for further digestion by restriction enzymes.
FEBS Lett. 1975 Apr 15;53(1):84-6
PMID: 1140401
-
Circular DNA forms of colicinogenic factors E1, E2 and E3 from Escherichia coli.
J Mol Biol. 1968 Sep 14;36(2):185-94
PMID: 4939624
-
Electrostatic effects on polynucleotide transitions. II. Behavior of titrated systems.
Biopolymers. 1967;5(10):993-1008
PMID: 6078885
-
Physical characterization of a plasmid cointegrate containing an F'his gnd element and the Salmonella typhimurium LT2 cryptic plasmid.
J Bacteriol. 1977 Mar;129(3):1601-6
PMID: 321435
-
A dye-buoyant-density method for the detection and isolation of closed circular duplex DNA: the closed circular DNA in HeLa cells.
Proc Natl Acad Sci U S A. 1967 May;57(5):1514-21
PMID: 5231757
-
Concentration and desalting of ribonucleases.
Biochem Biophys Res Commun. 1963 Feb 18;10:311-4
PMID: 13975595
-
A rapid alkaline extraction procedure for screening recombinant plasmid DNA.
Nucleic Acids Res. 1979 Nov 24;7(6):1513-23
PMID: 388356
-
Analysis of restriction fragments of T7 DNA and determination of molecular weights by electrophoresis in neutral and alkaline gels.
J Mol Biol. 1977 Feb 15;110(1):119-46
PMID: 845942
-
Alkaline denaturation of DNA's from various sources.
Biochim Biophys Acta. 1968 Jul 23;161(2):584-6
PMID: 5667300
-
Escherichia coli plasmid pBR313 insertion into plant protoplasts and into their nuclei.
Mol Gen Genet. 1977 Jul 20;154(2):113-21
PMID: 331080
-
Isolation of large bacterial plasmids and characterization of the P2 incompatibility group plasmids pMG1 and pMG5.
J Bacteriol. 1978 Jul;135(1):227-38
PMID: 97269
-
Detection and characterization of plasmids in Pseudomonas aeruginosa strain PAO.
J Bacteriol. 1973 Apr;114(1):424-33
PMID: 4633347
-
Plasmid content and tumor initiation complementation by Agrobacterium tumefaciens IIBNV6.
J Bacteriol. 1977 Dec;132(3):824-31
PMID: 924973
-
Isolation of covalently closed circular DNA of high molecular weight from bacteria.
Anal Biochem. 1976 Dec;76(2):431-41
PMID: 11708
-
Application of agarose gel electrophoresis to the characterization of plasmid DNA in drug-resistant enterobacteria.
J Gen Microbiol. 1979 Sep;114(1):15-25
PMID: 392048
-
Detection and characterization of plasmids in Pseudomonas glycinea.
J Bacteriol. 1977 Jul;131(1):224-8
PMID: 873883
-
Volume changes accompanying thermal denaturation of deoxyribonucleic acid. II. Denaturation at alkaline pH.
Biopolymers. 1970;9(4):445-7
PMID: 5436171
-
Apparent Involvement of a Plasmid in Phaseotoxin Production by Pseudomonas phaseolicola.
Appl Environ Microbiol. 1979 Mar;37(3):511-6
PMID: 16345357