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PMID: 6866765 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Size fractionation of Trypanosoma brucei DNA: localization of the 177-bp repeat satellite DNA and a variant surface glycoprotein gene in a mini-chromosomal DNA fraction.

Nucleic acids research ·Vol. 11 ·No. 12 ·1983-06-25 ·Pages 3889-901

Sloof P, Menke HH, Caspers MP, Borst P

Abstract

We have size-fractionated intact DNA from Trypanosoma brucei into a major large DNA fraction (greater than 350S) and minor middle-sized (60-250S) and small (less than 60S) DNA fractions. Large DNA contains the rRNA genes, the basic copy genes for several variant surface glycoproteins (VSGs), including one which lies near a telomer, and the expression-linked copies of the two VSG genes. The middle-sized DNA contains at least one VSG gene, but the hybridization of this fraction with probes for the conserved repetitive sequences that mark the edges of the transposed segments of VSG genes, suggests that it may contain many VSG genes. The 177-bp repeat satellite DNA is also exclusively found in this fraction.

MeSH Terms
Animals DNA/analysis Electrophoresis, Agar Gel Glycoproteins/genetics Molecular Weight Nucleic Acid Hybridization Rats Trypanosoma brucei brucei/genetics Variant Surface Glycoproteins, Trypanosoma
Chemicals
Glycoproteins Variant Surface Glycoproteins, Trypanosoma DNA
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Sloof P
Menke H H
Caspers M P
Borst P
References (35)
35 references, click to expand
  1. Isolation and characterization of kinetoplast DNA from bloodstream form of Trypanosoma brucei.
    J Cell Biol. 1978 Feb;76(2):293-309 PMID: 10605439
  2. Molecular weights of homogeneous coliphage DNA's from density-gradient sedimentation equilibrium.
    J Mol Biol. 1969 Aug 28;44(1):143-60 PMID: 5811826
  3. Spindle microtubules in the dividing nuclei of trypanosomes.
    J Cell Sci. 1970 Mar;6(2):365-83 PMID: 5419844
  4. Chromosome structure in ciliated protozoans.
    Cold Spring Harb Symp Quant Biol. 1974;38:609-18 PMID: 4208796
  5. Detection of specific sequences among DNA fragments separated by gel electrophoresis.
    J Mol Biol. 1975 Nov 5;98(3):503-17 PMID: 1195397
  6. Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I.
    J Mol Biol. 1977 Jun 15;113(1):237-51 PMID: 881736
  7. A physical map of the DNA regions flanking the rabbit beta-globin gene.
    Cell. 1977 Oct;12(2):429-39 PMID: 912752
  8. Human cytomegalovirus DNA. I. Molecular weight and infectivity.
    J Virol. 1978 Jun;26(3):813-6 PMID: 209219
  9. The organization of ribosomal RNA genes in the mitochondrial DNA of Tetrahymena pyriformis strain ST.
    Biochim Biophys Acta. 1978 Nov 21;521(1):169-86 PMID: 102353
  10. The structure and isomerization of herpes simplex virus genomes.
    Cell. 1979 Mar;16(3):481-94 PMID: 222462
  11. Studies on the amplification of dihydrofolate reductase genes in methotrexate-resistant cultured mouse cells.
    Cold Spring Harb Symp Quant Biol. 1979;43 Pt 2:1297-303 PMID: 290443
  12. Efficient transfer of large DNA fragments from agarose gels to diazobenzyloxymethyl-paper and rapid hybridization by using dextran sulfate.
    Proc Natl Acad Sci U S A. 1979 Aug;76(8):3683-7 PMID: 291033
  13. Genomic rearrangements correlated with antigenic variation in Trypanosoma brucei.
    Nature. 1979 Dec 20-27;282(5741):847-9 PMID: 514362
  14. Functional aspects of satellite DNA and heterochromatin.
    Int Rev Cytol. 1979;58:1-114 PMID: 391760
  15. Cultivation and in vitro cloning or procyclic culture forms of Trypanosoma brucei in a semi-defined medium. Short communication.
    Acta Trop. 1979 Sep;36(3):289-92 PMID: 43092
  16. The isolation of plasmids containing DNA complementary to messenger RNA for variant surface glycoproteins of Trypanosoma brucei.
    Gene. 1980 Mar;8(4):391-417 PMID: 7364218
  17. 6.5 S RNA; preliminary characterisation of unusual small RNAs in Trypanosoma brucei.
    Mol Biochem Parasitol. 1980 Apr;1(2):91-6 PMID: 7442711
  18. A rapid and efficient procedure for the purification of DNA from agarose gels.
    Anal Biochem. 1980 Aug;106(2):492-6 PMID: 6255823
  19. Sequence-specific fragmentation of macronuclear DNA in a holotrichous ciliate.
    Cell. 1981 May;24(2):313-20 PMID: 6786754
  20. Gene duplication and transposition linked to antigenic variation in Trypanosoma brucei.
    Proc Natl Acad Sci U S A. 1981 May;78(5):2673-7 PMID: 6265900
  21. DNA rearrangements involving the genes for variant antigens in Trypanosoma brucei.
    Cold Spring Harb Symp Quant Biol. 1981;45 Pt 2:935-43 PMID: 6942953
  22. Variant surface glycoproteins of Trypanosoma brucei are synthesised with cleavable hydrophobic sequences at the carboxy and amino termini.
    Nucleic Acids Res. 1981 Sep 25;9(18):4735-43 PMID: 6272213
  23. Homologous 3'-terminal regions of mRNAs for surface antigens of different antigenic variants of Trypanosoma brucei.
    Nucleic Acids Res. 1981 Sep 25;9(18):4745-53 PMID: 6170939
  24. Characterization of the DNA duplication-transposition that controls the expression of two genes for variant surface glycoproteins in Trypanosoma brucei.
    Nucleic Acids Res. 1982 Jan 22;10(2):593-609 PMID: 6278423
  25. Rapid evolution of genes coding for variant surface glycoproteins in trypanosomes.
    Gene. 1982 Feb;17(2):197-211 PMID: 7084668
  26. Two distinct forms of surface antigen gene rearrangement in Trypanosoma brucei.
    Nature. 1982 Jun 10;297(5866):514-6 PMID: 6896361
  27. On the DNA content and ploidy of trypanosomes.
    Mol Biochem Parasitol. 1982 Jul;6(1):13-23 PMID: 7110199
  28. Molecular drive: a cohesive mode of species evolution.
    Nature. 1982 Sep 9;299(5879):111-7 PMID: 7110332
  29. RNA splicing is required to make the messenger RNA for a variant surface antigen in trypanosomes.
    Nucleic Acids Res. 1982 Jun 25;10(12):3591-604 PMID: 6287414
  30. Molecular basis for trypanosome antigenic variation.
    Cell. 1982 Jun;29(2):291-303 PMID: 6811137
  31. Genomic environment of T. brucei VSG genes: presence of a minichromosome.
    Nature. 1982 Sep 30;299(5882):417-21 PMID: 7121578
  32. Genomic environment of the expression-linked extra copies of genes for surface antigens of Trypanosoma brucei resembles the end of a chromosome.
    Nature. 1982 Sep 30;299(5882):451-3 PMID: 7121582
  33. Nucleotide sequence of bacteriophage lambda DNA.
    J Mol Biol. 1982 Dec 25;162(4):729-73 PMID: 6221115
  34. Activation of trypanosome surface glycoprotein genes involves a duplication-transposition leading to an altered 3' end.
    Cell. 1981 Dec;27(3 Pt 2):497-505 PMID: 6101223
  35. SEDIMENTATION STUDIES OF THE SIZE AND SHAPE OF DNA.
    J Mol Biol. 1965 Feb;11:373-90 PMID: 14290352
Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
0305-1048
Published
1983-06-25
Pages
3889-901
Language
English
Region
England
NLM ID
0411011
PMCID
PMC326014
Subset
IM
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