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PMID: 6819543 Published · ppublish English Comparative Study Journal Article Research Support, U.S. Gov't, P.H.S.

The terminal organization of macronuclear DNA in Oxytricha fallax.

Nucleic acids research ·Vol. 10 ·No. 24 ·1982-12-20 ·Pages 8145-54

Pluta AF, Kaine BP, Spear BB

Abstract

The macronucleus of the hypotrichous ciliate Oxytricha fallax is transcriptionally active and contains linear achromosomal DNA molecules that function as single-gene units. The terminal organization of macronuclear DNA was analyzed by chemical sequencing and S1 mapping. The terminal sequence of total macronuclear DNA was determined for molecules labeled at the 5' or 3' ends. Results indicate that the 5' sequence C4A4C4A4C4 and the 3' sequence G4T4G4T4G4T4G4T4G4 occur at both ends of all DNA molecules in the macronucleus. The discrepancy in the length of the common terminal sequence between the 5' and 3' ends was clarified by a limited S1 digestion experiment, which indicated the existence of a 16 nucleotide long single-stranded tail at the 3' ends.

MeSH Terms
Animals Base Sequence Cell Nucleus/analysis Ciliophora/genetics DNA/genetics Genes Species Specificity
Chemicals
DNA
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Pluta A F
Kaine B P
Spear B B
References (27)
27 references, click to expand
  1. Morphology and development of the macronuclei of the ciliates Stylonychia mytilus and Euplotes aediculatus.
    Chromosoma. 1971;33(2):209-38 PMID: 4996055
  2. Inverted terminal repeats are added to genes during macronuclear development in Oxytricha nova.
    Proc Natl Acad Sci U S A. 1982 May;79(10):3255-9 PMID: 6808504
  3. Chromosome structure in ciliated protozoans.
    Cold Spring Harb Symp Quant Biol. 1974;38:609-18 PMID: 4208796
  4. Inverted repetitious sequences in the macronuclear DNA of hypotrichous ciliates.
    Proc Natl Acad Sci U S A. 1975 Feb;72(2):678-82 PMID: 804696
  5. Polytene chromosomes of Oxytricha: biochemical and morphological changes during macronuclear development in a ciliated protozoan.
    Chromosoma. 1976 JAN 27;54(1):1-13 PMID: 813980
  6. DNA of ciliated protozoa: DNA sequence diminution during macronuclear development of Oxytricha.
    Cell. 1976 Jan;7(1):67-74 PMID: 820431
  7. Mitochondrial DNA replication in Paramecium aurelia. Cross-linking of the initiation end.
    J Mol Biol. 1977 Jan 15;109(2):327-44 PMID: 839545
  8. Identification of a protein linked to the ends of adenovirus DNA.
    Cell. 1977 Jun;11(2):283-95 PMID: 196758
  9. Gene-sized DNA molecules of the Oxytricha macronucleus have the same terminal sequence.
    Proc Natl Acad Sci U S A. 1977 Oct;74(10):4325-8 PMID: 412187
  10. A tandemly repeated sequence at the termini of the extrachromosomal ribosomal RNA genes in Tetrahymena.
    J Mol Biol. 1978 Mar 25;120(1):33-53 PMID: 642006
  11. Detection of 5-methylcytosine in DNA sequences.
    Nucleic Acids Res. 1978 May;5(5):1479-85 PMID: 351561
  12. Macronuclear DNA of the hypotrichous ciliate Oxytricha fallax.
    Proc Natl Acad Sci U S A. 1978 Oct;75(10):4992-6 PMID: 105360
  13. Yeast chromosomal DNA molecules have strands which are cross-linked at their termini.
    Chromosoma. 1979 Apr 30;72(2):131-50 PMID: 378617
  14. Structure of the 3' hairpin termini of four rodent parvovirus genomes: nucleotide sequence homology at origins of DNA replication.
    Cell. 1979 Jul;17(3):691-703 PMID: 225040
  15. Adeno-associated virus DNA replication.
    Cold Spring Harb Symp Quant Biol. 1979;43 Pt 2:781-7 PMID: 226321
  16. Sequencing end-labeled DNA with base-specific chemical cleavages.
    Methods Enzymol. 1980;65(1):499-560 PMID: 6246368
  17. Isolation and mapping of the rRNA genes in the macronucleus of Oxytricha fallax.
    Chromosoma. 1980;77(2):193-202 PMID: 6248307
  18. Nucleotide sequence of cauliflower mosaic virus DNA.
    Cell. 1980 Aug;21(1):285-94 PMID: 7407912
  19. Inverted terminal repeat sequence in the macronuclear DNA of Stylonychia pustulata.
    Gene. 1980 Sep;10(4):301-6 PMID: 6776007
  20. In vitro aggregation of the gene-sized DNA molecules of the ciliate Stylonychia mytilus.
    Proc Natl Acad Sci U S A. 1980 Jul;77(7):4104-7 PMID: 6776521
  21. Putative actin genes in the macronucleus of Oxytricha fallax.
    Proc Natl Acad Sci U S A. 1980 Sep;77(9):5336-40 PMID: 6254076
  22. Cloning and characterization of Paramecium mitochondrial DNA replication initiation regions.
    Gene. 1980 Oct;11(1-2):43-52 PMID: 7002733
  23. Nucleotide sequence at the termini of the DNA of Bacillus subtilis phage phi 29.
    Proc Natl Acad Sci U S A. 1981 Mar;78(3):1446-50 PMID: 6262800
  24. All gene-sized DNA molecules in four species of hypotrichs have the same terminal sequence and an unusual 3' terminus.
    Proc Natl Acad Sci U S A. 1981 May;78(5):3015-9 PMID: 6265931
  25. Higher order DNA structure in macronuclear chromatin of the hypotrichous ciliate Oxytricha nova.
    Proc Natl Acad Sci U S A. 1982 Apr;79(8):2495-9 PMID: 6806811
  26. Micronuclear DNA sequences of Oxytricha fallax homologous to the macronuclear inverted terminal repeat.
    Nucleic Acids Res. 1982 May 11;10(9):2911-24 PMID: 7099969
  27. A circula DNA-protein complex from adenoviruses.
    Virology. 1973 Nov;56(1):54-69 PMID: 4745628
Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
0305-1048
Published
1982-12-20
Pages
8145-54
Language
English
Region
England
NLM ID
0411011
PMCID
PMC327075
Subset
IM
Grants
NIGMS NIH HHS · GM23440 · United States
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