Home LiteratureArticle Details
PMID: 6330033 Published · ppublish English Comparative Study Journal Article Research Support, U.S. Gov't, P.H.S.

Evidence for antitermination in Escherichia coli RRNA transcription.

Journal of bacteriology ·Vol. 159 ·No. 1 ·1984-07-00 ·Pages 260-4

Aksoy S, Squires CL, Squires C

Abstract

The stable RNA operons of Escherichia coli do not exhibit polarity, even though they make an RNA product that is not translated. By contrast, most E. coli operons that specify proteins exhibit polarity if their translation is interrupted. The transcriptional component of this polarity depends on the action of Rho protein on the exposed mRNA, which results in premature transcription termination. Here we examine how a stable RNA operon (rrnG) transcript is protected from the Rho protein-mediated polarity response. We compared transcription from the ara and the rrnG promoters through a 16S DNA segment. In each case, the promoter-16S sequences were joined to a trp-lac fusion, and lacZ mRNA was examined in rho+ and rho-115 strains. We found significant Rho protein-dependent termination of transcripts from the ara promoter but little or no Rho protein effect on transcription from the rrnG promoter. We concluded that the transcript of the 16S ribosomal DNA segment does contain Rho protein-dependent transcription terminators, but there is an antitermination system in the rrnG control region that allows it to transcribe through those terminators.

MeSH Terms
Base Sequence Coliphages/genetics DNA Restriction Enzymes Escherichia coli/genetics Genotype Operon Plasmids RNA, Messenger/genetics RNA, Ribosomal/genetics Species Specificity Transcription, Genetic
Chemicals
RNA, Messenger RNA, Ribosomal DNA Restriction Enzymes
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Aksoy S
Squires C L
Squires C
References (33)
33 references, click to expand
  1. Rifampicin supersensitivity of rho strains of E. coli, and suppression by sur mutation.
    Mol Gen Genet. 1979 Jan 16;169(1):27-34 PMID: 374996
  2. Control features within the rplJL-rpoBC transcription unit of Escherichia coli.
    Proc Natl Acad Sci U S A. 1979 Oct;76(10):4922-6 PMID: 116224
  3. RPC-5 column chromatography for the isolation of DNA fragments.
    Methods Enzymol. 1980;65(1):327-47 PMID: 6246356
  4. Insertions of Tn 10 into an E. coli ribosomal RNA operon are incompletely polar.
    Cell. 1980 Aug;21(1):257-65 PMID: 6157478
  5. Analysis of gene control signals by DNA fusion and cloning in Escherichia coli.
    J Mol Biol. 1980 Apr;138(2):179-207 PMID: 6997493
  6. Translational coupling during expression of the tryptophan operon of Escherichia coli.
    Genetics. 1980 Aug;95(4):785-95 PMID: 6162715
  7. Polar mutations in lac, gal and phage lambda consist of a few IS-DNA sequences inserted with either orientation.
    Mol Gen Genet. 1972;119(3):223-31 PMID: 4567156
  8. Electron microscope heteroduplex studies of sequence relations among plasmids of Escherichia coli. VIII. The structure of bacteriophage phi 80d-3ilv+su+7, including the mapping of the ribosomal RNA genes.
    J Mol Biol. 1974 Nov 15;89(4):631-46 PMID: 4615163
  9. A colony bank containing synthetic Col El hybrid plasmids representative of the entire E. coli genome.
    Cell. 1976 Sep;9(1):91-9 PMID: 788919
  10. Induction of sigma factor synthesis in Escherichia coli by the N gene product of bacteriophage lambda.
    Proc Natl Acad Sci U S A. 1976 Dec;73(12):4405-9 PMID: 794877
  11. Characterization of hybrid plasmids carrying individual ribosomal ribonucleic acid transcription units of Escherichia coli.
    J Bacteriol. 1977 Dec;132(3):931-49 PMID: 336613
  12. Some rRNA operons in E. coli have tRNA genes at their distal ends.
    Cell. 1978 Feb;13(2):335-44 PMID: 342117
  13. Control of transcription termination.
    Annu Rev Biochem. 1978;47:967-96 PMID: 354508
  14. Deletion analysis of the expression of rRNA genes and associated tRNA genes carried by a lambda transducing bacteriophage.
    J Bacteriol. 1979 Jan;137(1):507-16 PMID: 368028
  15. A system for shotgun DNA sequencing.
    Nucleic Acids Res. 1981 Jan 24;9(2):309-21 PMID: 6259625
  16. Gene organization and primary structure of a ribosomal RNA operon from Escherichia coli.
    J Mol Biol. 1981 May 15;148(2):107-27 PMID: 7028991
  17. Tn9 and IS1 inserts in a ribosomal ribonucleic acid operon of Escherichia coli are incompletely polar.
    J Bacteriol. 1981 Dec;148(3):897-903 PMID: 6171559
  18. Chromosomal locations of the genes for rRNA in Escherichia coli K-12.
    J Bacteriol. 1982 Feb;149(2):458-68 PMID: 6173374
  19. The complete nucleotide sequence of the tryptophan operon of Escherichia coli.
    Nucleic Acids Res. 1981 Dec 21;9(24):6647-68 PMID: 7038627
  20. Nucleotide sequence at the end of the gene for the RNA polymerase beta' subunit (rpoC).
    Nucleic Acids Res. 1981 Dec 21;9(24):6827-40 PMID: 6278450
  21. Transposable elements in prokaryotes.
    Annu Rev Genet. 1981;15:341-404 PMID: 6279020
  22. Nucleotide sequence of the rrnG ribosomal RNA promoter region of Escherichia coli.
    Nucleic Acids Res. 1982 May 25;10(10):3303-13 PMID: 6285294
  23. Translational coupling at an intercistronic boundary of the Escherichia coli galactose operon.
    Cell. 1982 Oct;30(3):865-71 PMID: 6754091
  24. Transcription terminates at lambda tR1 in three clusters.
    Proc Natl Acad Sci U S A. 1982 Oct;79(20):6171-5 PMID: 6216477
  25. Efficient read-through of Tn9 and IS1 by RNA polymerase molecules that initiate at rRNA promoters.
    J Bacteriol. 1983 Feb;153(2):672-84 PMID: 6185465
  26. Effect of rifampicin on expression of lacZ fused to promoters or terminators of the E.coli rpoBC operon.
    Nucleic Acids Res. 1982 Nov 25;10(22):7425-38 PMID: 6296776
  27. The operon that encodes the sigma subunit of RNA polymerase also encodes ribosomal protein S21 and DNA primase in E. coli K12.
    Cell. 1983 Feb;32(2):335-49 PMID: 6186393
  28. Regulation of the rpsU-dnaG-rpoD macromolecular synthesis operon and the initiation of DNA replication in Escherichia coli K-12.
    Mol Gen Genet. 1983;189(1):48-57 PMID: 6222240
  29. A new gene in E. coli RNA synthesis.
    Mol Gen Genet. 1983;189(2):314-20 PMID: 6190071
  30. Evidence that a nucleotide sequence, "boxA," is involved in the action of the NusA protein.
    Cell. 1983 Aug;34(1):143-9 PMID: 6309406
  31. Sequence of the lacZ gene of Escherichia coli.
    EMBO J. 1983;2(4):593-7 PMID: 6313347
  32. Translational coupling of the trpB and trpA genes in the Escherichia coli tryptophan operon.
    J Bacteriol. 1984 Feb;157(2):363-7 PMID: 6319355
  33. Pausing and attenuation of in vitro transcription in the rrnB operon of E. coli.
    Cell. 1981 Dec;27(3 Pt 2):523-31 PMID: 6086107
Article Info
Journal
Journal of bacteriology
Abbr.
J Bacteriol
ISSN
0021-9193
Published
1984-07-00
Pages
260-4
Language
English
Region
United States
NLM ID
2985120R
PMCID
PMC215622
Subset
IM
Grants
NIGMS NIH HHS · GM-24751 · United States
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com