Home LiteratureArticle Details
PMID: 6294055 Published · ppublish English Journal Article Research Support, U.S. Gov't, P.H.S.

Mapping of chromosomal IS5 elements that mediate type II F-prime plasmid excision in Escherichia coli K-12.

Journal of bacteriology ·Vol. 153 ·No. 1 ·1983-01-00 ·Pages 395-407

Timmons MS, Bogardus AM, Deonier RC

Abstract

Three IS5 elements were mapped in overlapping chromosomal segments on a series of F-prime plasmids by restriction analysis and hybridization. IS5A was located clockwise of proA near 6 min, IS5B was located clockwise of purE near 12 min, and IS5C was tentatively located near 14 min on the Escherichia coli K-12 map. The physical structures of nine type II F-prime plasmids that contain chromosomal DNA from this region indicated that these plasmids were excised from the chromosome by recombination between pairs of IS5 elements.

MeSH Terms
Base Sequence Chromosome Mapping Chromosomes, Bacterial DNA Restriction Enzymes DNA Transposable Elements DNA, Bacterial Escherichia coli/genetics F Factor Nucleic Acid Hybridization Recombination, Genetic
Chemicals
DNA Transposable Elements DNA, Bacterial DNA Restriction Enzymes
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Timmons M S
Bogardus A M
Deonier R C
References (43)
43 references, click to expand
  1. Specificity in the formation of delta tra F-prime plasmids.
    J Bacteriol. 1980 Aug;143(2):680-92 PMID: 6259119
  2. Enumeration and identification of IS3 elements in Escherichia coli strains.
    J Bacteriol. 1979 Mar;137(3):1421-4 PMID: 374349
  3. Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I.
    J Mol Biol. 1977 Jun 15;113(1):237-51 PMID: 881736
  4. Formation of merodiploids in matings with a class of Rec- recipient strains of Escherichia coli K12.
    Proc Natl Acad Sci U S A. 1968 May;60(1):160-7 PMID: 4873517
  5. Modes of gene transfer and recombination in bacteria.
    Annu Rev Genet. 1978;12:249-87 PMID: 106767
  6. Construction and BamHL analysis of chimeric plasmids containing EcoRL DNA fragments of the F sex factor.
    Plasmid. 1978 Feb;1(2):174-86 PMID: 372961
  7. Further mapping of IS2 and IS3 in the lac-purE region of the Escherichia coli K-12 genome: structure of the F-prime ORF203.
    J Bacteriol. 1977 Feb;129(2):1129-40 PMID: 320179
  8. Transposition derivatives of an Hfr strain of Escherichia coli K-12.
    Genetics. 1967 Jul;56(3):503-25 PMID: 4861168
  9. Electron microscope heteroduplex studies of sequence relations among plasmids of Escherichia coli: structure of F100, F152, and F8 and mapping of the Escherichia coli chromosomal region fep-supE-gal-attlambda-uvrB.
    J Bacteriol. 1978 Jun;134(3):778-94 PMID: 350847
  10. IS4 at its chromosomal site in E. coli K12.
    Mol Gen Genet. 1980;178(2):285-91 PMID: 6248724
  11. Linkage map of Escherichia coli K-12, edition 6.
    Microbiol Rev. 1980 Mar;44(1):1-56 PMID: 6997720
  12. Isolation and characterisation of Hfr strains from a recombination-deficient strain of Escherichia coli.
    Mol Gen Genet. 1971;113(2):166-73 PMID: 4944013
  13. Plasmid detection and sizing in single colony lysates.
    Science. 1977 Jan 28;195(4276):393-4 PMID: 318764
  14. Expression of two proteins from overlapping and oppositely oriented genes on transposable DNA insertion element IS5.
    Nature. 1982 May 13;297(5862):124-8 PMID: 6281651
  15. Heteroduplex analysis of tra delta f' plasmids and the mechanism of their formation.
    J Bacteriol. 1977 Sep;131(3):970-80 PMID: 330507
  16. Plasmid identification using specific endonucleases.
    Mol Gen Genet. 1974;133(2):141-9 PMID: 4614064
  17. The nucleotide sequence and protein-coding capability of the transposable element IS5.
    Gene. 1981 Aug;14(3):155-63 PMID: 6269958
  18. Inactivation of the Serratia marcescens gene for the lipoprotein in Escherichia coli by insertion sequences, IS1 and IS5; sequence analysis of junction points.
    Mol Gen Genet. 1981;183(1):107-14 PMID: 6276671
  19. Specificity of substrate recognition by the EcoRI restriction endonuclease.
    Proc Natl Acad Sci U S A. 1975 Sep;72(9):3310-4 PMID: 242001
  20. Transposition of a chromosomal segment bounded by redundant rRNA genes into other rRNA genes in Escherichia coli.
    J Bacteriol. 1982 Feb;149(2):449-57 PMID: 6173373
  21. The nucleotide sequence of IS5 from Escherichia coli.
    Gene. 1981 Aug;14(3):165-74 PMID: 6269959
  22. Electron microscopic heteroduplex studies of sequence relations among plasmids of Escherichia coli: structure of F13 and related F-primes.
    J Bacteriol. 1975 May;122(2):749-63 PMID: 1092667
  23. Spontaneous tandem genetic duplications in Salmonella typhimurium arise by unequal recombination between rRNA (rrn) cistrons.
    Proc Natl Acad Sci U S A. 1981 May;78(5):3113-7 PMID: 6789329
  24. Episomes.
    Annu Rev Microbiol. 1967;21:601-38 PMID: 4861330
  25. Identification of a second cryptic lambdoid prophage locus in the E. coli K12 chromosome.
    Mol Gen Genet. 1980;180(2):479-81 PMID: 6258029
  26. Deletions and insertions in the immunity region of coliphage lambda: revised measurement of the promoter-startpoint distance.
    Virology. 1974 Dec;62(2):458-71 PMID: 4432374
  27. Biochemical and genetic studies with lysine+methionine mutants of Escherichia coli: lipoic acid and alpha-ketoglutarate dehydrogenase-less mutants.
    J Gen Microbiol. 1968 Oct;53(3):363-81 PMID: 4889470
  28. Detection of specific sequences among DNA fragments separated by gel electrophoresis.
    J Mol Biol. 1975 Nov 5;98(3):503-17 PMID: 1195397
  29. New map of bacteriophage lambda DNA.
    J Virol. 1980 Jan;33(1):390-400 PMID: 6245240
  30. Escherichia coli K-12 F-prime factors, old and new.
    Bacteriol Rev. 1972 Dec;36(4):587-607 PMID: 4568765
  31. Comparison of IS1, IS2 and IS3 copy number in Escherichia coli strains K-12, B and C.
    Gene. 1981 Dec;16(1-3):161-70 PMID: 6282688
  32. Electron microscope heteroduplex studies of sequence relations among plasmids of Escherichia coli. I. Structure of F-prime factors.
    J Mol Biol. 1972 Nov 14;71(2):471-97 PMID: 4564488
  33. Distribution of IS5 in bacteria.
    Gene. 1981 Dec;16(1-3):347-52 PMID: 6282702
  34. Mapping of IS1 elements flanking the argF gene region on the Escherichia coli K-12 chromosome.
    Mol Gen Genet. 1981;181(2):222-9 PMID: 6268939
  35. Mutants of Escherichia coli K-12 defective in DNA repair and in genetic recombination.
    Genetics. 1966 Jun;53(6):1137-50 PMID: 5335129
  36. Selected translocation of plasmid genes: frequency and regional specificity of translocation of the Tn3 element.
    J Bacteriol. 1977 May;130(2):888-99 PMID: 233726
  37. Tandem duplications resulting from recombination between ribosomal RNA genes in Escherichia coli.
    J Mol Biol. 1977 Nov 5;116(3):407-28 PMID: 338920
  38. Sequence organization of feline leukemia virus DNA in infected cells.
    Nucleic Acids Res. 1980 Aug 11;8(15):3287-305 PMID: 6255412
  39. Regional preference of insertion of Tn501 and Tn802 into RP1 and its derivatives.
    Mol Gen Genet. 1978 Nov 9;166(3):313-20 PMID: 105244
  40. Chromosome transfer and Hfr formation by F in rec+ and recA strains of Escherichia coli K12.
    Plasmid. 1979 Jul;2(3):358-65 PMID: 384417
  41. Specificity in formation of type II F' plasmids.
    J Bacteriol. 1979 Sep;139(3):961-76 PMID: 383701
  42. The Occurrence of a Genetic Transposition in a Strain of Escherichia Coli.
    Genetics. 1962 May;47(5):577-85 PMID: 17248104
  43. Fate of donor insertion sequence IS1 during transposition.
    Proc Natl Acad Sci U S A. 1980 May;77(5):2514-8 PMID: 6248852
Article Info
Journal
Journal of bacteriology
Abbr.
J Bacteriol
ISSN
0021-9193
Published
1983-01-00
Pages
395-407
Language
English
Region
United States
NLM ID
2985120R
PMCID
PMC217386
Subset
IM
Grants
NIGMS NIH HHS · GM24589 · United States
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com