Abstract
Analyses of radioactive oligonucleotides in endonuclease digests of 3'-terminally labeled lambda DNA revealed the 3' terminal sequence -GTTACG for the l strand and -ACCCGCG for the r strand. These sequences, together with those previously known for the 5' cohesive ends, provide a total of 25 known base-pairs in the vicinity of the termini. When the cohesive ends are paired, the sequence between the nicks can be bisected by a 2-fold rotational axis of symmetry. Five of the first eight base-pairs, on either side of the axis, are rotationally symmetric. This symmetry may be involved in the recognition of the site by an enzyme responsible for formation of the cohesive ends.
MeSH Terms
Adenine Nucleotides/analysis
Base Sequence
Coliphages/analysis
Cytosine Nucleotides/analysis
DNA, Viral/analysis
Deoxyribonucleases
Electrophoresis, Paper
Guanine Nucleotides/analysis
Hydrolysis
Models, Structural
Oligonucleotides/analysis
Phosphorus Isotopes
Polynucleotides/analysis
Thymine Nucleotides/analysis
Chemicals
Adenine Nucleotides
Cytosine Nucleotides
DNA, Viral
Guanine Nucleotides
Oligonucleotides
Phosphorus Isotopes
Polynucleotides
Thymine Nucleotides
Deoxyribonucleases
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Weigel P H
Englund P T
Murray K
Old R W
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