Home LiteratureArticle Details
PMID: 4352720 Published · ppublish English Journal Article

Nucleotide sequence analysis with polynucleotide kinase and nucleotide "mapping" methods. 5'-Terminal sequences of deoxyribonucleic acid from bacteriophages lambda and 424.

The Biochemical journal ·Vol. 131 ·No. 3 ·1973-03-00 ·Pages 569-82

Murray K

Abstract

The polynucleotide kinase reaction was used in analyses of complex mixtures of oligodeoxynucleotides which were fractionated by various two-dimensional nucleotide ;mapping' procedures. Parallel ionophoretic analyses on DEAE-cellulose paper, pH2, and AE-cellulose paper, pH3.5, of venom phosphodiesterase partial digests of 5'-terminally labelled oligonucleotides enabled the sequence of the nucleotides to be deduced uniquely. A ;diagonal ionophoresis' method has been used with mixtures of nucleotides. Application of these methods to 5'-terminally labelled DNA from bacteriophage lambda gave the terminal sequences pA-G-G-T-C-G and pG-G-G-C-G. Identical 5'-terminal sequences were found with DNA from bacteriophage 424.

MeSH Terms
Adenine Nucleotides/analysis Adenosine Triphosphate Animals Autoradiography Base Sequence Coliphages/analysis Cytosine Nucleotides/analysis DNA, Viral/analysis Deoxyribonucleases Deoxyribonucleotides/analysis Electrophoresis, Paper Endonucleases Escherichia coli/enzymology Guanine Nucleotides/analysis Hydrogen-Ion Concentration Mutation Oligonucleotides/analysis Pancreas/enzymology Phosphoric Diester Hydrolases Phosphorus Isotopes Phosphotransferases/analysis Polynucleotides Snakes Species Specificity Thymine Nucleotides/analysis Venoms
Chemicals
Adenine Nucleotides Cytosine Nucleotides DNA, Viral Deoxyribonucleotides Guanine Nucleotides Oligonucleotides Phosphorus Isotopes Polynucleotides Thymine Nucleotides Venoms Adenosine Triphosphate Phosphotransferases Deoxyribonucleases Endonucleases Phosphoric Diester Hydrolases
Authors & Affiliations
1 authors, click to expand affiliations / ORCID
Murray K
References (25)
25 references, click to expand
  1. A simple method for the preparation of 32-P-labelled adenosine triphosphate of high specific activity.
    Biochem J. 1964 Jan;90(1):147-9 PMID: 5832284
  2. The frequencies of certain sequences of nucleotides in deoxyribonucleic acid.
    Biochem J. 1960 Apr;75:17-27 PMID: 13806335
  3. A two-dimensional fractionation procedure for radioactive nucleotides.
    J Mol Biol. 1965 Sep;13(2):373-98 PMID: 5325727
  4. The 5'-terminal nucleotides of T7 bacteriophage deoxyribonucleic acid.
    J Mol Biol. 1966 Jan;15(1):49-61 PMID: 5912053
  5. The enzymatic phosphorylation of ribonucleic acid and deoxyribonucleic acid. I. Phosphorylation at 5'-hydroxyl termini.
    J Biol Chem. 1966 Jun 25;241(12):2923-32 PMID: 4287929
  6. Cohesive sites on the deoxyribonucleic acids from several temperate coliphages.
    J Mol Biol. 1966 Jun;17(2):343-57 PMID: 5336321
  7. Use of neutron activation in the characterization of small quantities of nucleic acids.
    Nature. 1966 Jul 23;211(5047):376-8 PMID: 4290915
  8. The 5'-terminal dinucleotides of the separated strands of T7 bacteriophage deoxyribonucleic acid.
    J Mol Biol. 1967 Feb 14;23(3):405-15 PMID: 4291729
  9. Mapping the 5'-terminal nucleotides of the DNA of bacteriophage lambda and related phages.
    Proc Natl Acad Sci U S A. 1967 Jan;57(1):170-7 PMID: 4292665
  10. Measurement of 32P activity in a liquid scintillation counter without the use of scintillator.
    Anal Biochem. 1968 Jan;22(1):70-3 PMID: 5636960
  11. The stepwise removal of histones from chicken erythrocyte nucleoprotein.
    Biochem J. 1968 Mar;107(2):207-15 PMID: 5641876
  12. Structure and base sequence in the cohesive ends of bacteriophage lambda DNA.
    J Mol Biol. 1968 Aug 14;35(3):523-37 PMID: 4299833
  13. Terminal sequences of bacteriophage RNAs.
    Nature. 1968 Nov 9;220(5167):548-52 PMID: 5686725
  14. Ter, a function which generates the ends of the mature lambda chromosome.
    Nature. 1969 Jan 18;221(5177):242-4 PMID: 5763077
  15. Base sequence and evolution of guinea-pig alpha-satellite DNA.
    Nature. 1970 Aug 22;227(5260):794-8 PMID: 4317352
  16. Nucleotide 'maps' of digests of deoxyribonucleic acid.
    Biochem J. 1970 Aug;118(5):831-41 PMID: 5476726
  17. Nucleotide sequence analysis of DNA. I. Partial sequence of the cohesive ends of bacteriophage lambda and 186 DNA.
    J Mol Biol. 1970 Aug;51(3):501-21 PMID: 4321727
  18. Use of polynucleotide kinase in fingerprinting non-radioactive nucleic acids.
    J Mol Biol. 1969 Aug 14;43(3):607-17 PMID: 5401237
  19. Nucleotide sequence analysis of DNA. II. Complete nucleotide sequence of the cohesive ends of bacteriophage lambda DNA.
    J Mol Biol. 1971 May 14;57(3):491-511 PMID: 4931680
  20. Stepwise removal of histones from native deoxyribonucleoprotein by titration with acid at low temperature and some properties of the resulting partial nucleoproteins.
    J Mol Biol. 1969 Jan 14;39(1):125-44 PMID: 5406274
  21. Chromatography of nucleic acid digests on thin layers of cellulose impregnated with polyethyleneimine.
    Biochem J. 1971 Jul;123(4):613-7 PMID: 4942451
  22. Choline phosphokinase.
    J Biol Chem. 1953 May;202(1):431-44 PMID: 13061469
  23. The transformation of Escherichia coli with deoxyribonucleic acid isolated from bacteriophage lambda-dg.
    J Mol Biol. 1960 Dec;2:392-415 PMID: 13750787
  24. The deoxyribonucleases of Escherichia coli. II. Purification and properties of a ribonucleic acid-inhibitable endonuclease.
    J Biol Chem. 1962 Mar;237:819-28 PMID: 14463751
  25. Phosphorylation of nucleic acid by an enzyme from T4 bacteriophage-infected Escherichia coli.
    Proc Natl Acad Sci U S A. 1965 Jul;54(1):158-65 PMID: 5323016
Article Info
Journal
The Biochemical journal
Abbr.
Biochem J
ISSN
0264-6021
Published
1973-03-00
Pages
569-82
Language
English
Region
England
NLM ID
2984726R
PMCID
PMC1177504
Subset
IM
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com