Home LiteratureArticle Details
PMID: 3822819 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

Structure and organization of the chicken H2B histone gene family.

Nucleic acids research ·Vol. 15 ·No. 3 ·1987-02-11 ·Pages 1063-80

Grandy DK, Dodgson JB

Abstract

The results of Southern blotting experiments confirm that the chicken H2B histone gene family contains eight highly homologous members. One or two more sequences which are considerably divergent from the others appear to exist in the chicken genome. Seven of the eight H2B genes have been cloned and sequenced. All seven genes fall in two histone gene clusters, but no common arrangement exists for the clusters themselves. Three different H2B protein variants are encoded by these seven genes. The nucleotide sequence homology among the genes within their coding sequences appears to exceed that required for the corresponding protein sequences, suggesting that histone H2B mRNA sequence and structure are both selected during evolution. An analysis of the 5' flanking sequence data reveals that these genes possess CCAAT and TATA boxes, elements commonly associated with genes transcribed by RNA polymerase II. In addition, these genes all share an H2B-specific element of the form: ATTTGCATA. The 3' sequences of these genes contain the hyphenated symmetrical dyad homology and downstream purine-rich sequence shared by histone genes in general.

MeSH Terms
Amino Acid Sequence Animals Base Sequence Chickens Cloning, Molecular DNA, Recombinant/isolation & purification Erythrocytes/metabolism Genes Histones/blood,genetics Nucleic Acid Hybridization
Chemicals
DNA, Recombinant Histones
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Grandy D K
Dodgson J B
References (36)
36 references, click to expand
  1. G1 and S phase mammalian cells synthesize histones at equivalent rates.
    Cell. 1980 Aug;21(1):195-204 PMID: 7407911
  2. Chromosomal organization of chicken histone genes: preferred associations and inverted duplications.
    Mol Cell Biol. 1985 Nov;5(11):3108-15 PMID: 3018501
  3. The structure and evolution of the human beta-globin gene family.
    Cell. 1980 Oct;21(3):653-68 PMID: 6985477
  4. Xenopus laevis histone genes: variant H1 genes are present in different clusters.
    Cell. 1980 Dec;22(3):807-15 PMID: 7460012
  5. The sequence 5'-AAUAAA-3'forms parts of the recognition site for polyadenylation of late SV40 mRNAs.
    Cell. 1981 Apr;24(1):251-60 PMID: 6113054
  6. The structure of the human histone genes: clustered but not tandemly repeated.
    Cell. 1981 Jun;24(3):661-8 PMID: 6265100
  7. Chromosomal arrangement of the chicken beta-type globin genes.
    Cell. 1981 Jun;24(3):669-77 PMID: 7249078
  8. Histone genes are clustered but not tandemly repeated in the chicken genome.
    Proc Natl Acad Sci U S A. 1981 May;78(5):2856-60 PMID: 6265918
  9. The organization and expression of histone gene families.
    Cell. 1981 Aug;25(2):301-13 PMID: 6793234
  10. Isolation of two clusters of mouse histone genes.
    Proc Natl Acad Sci U S A. 1981 Jul;78(7):4078-82 PMID: 6457299
  11. Separation of basal histone synthesis from S-phase histone synthesis in dividing cells.
    Cell. 1981 Dec;27(2 Pt 1):321-30 PMID: 7199388
  12. The complete amino-acid sequence of histone H2B from erythrocytes of the adult domestic fowl Gallus domesticus.
    Biochim Biophys Acta. 1982 Apr 21;703(1):17-20 PMID: 7074112
  13. A chicken histone H3 gene contains intervening sequences.
    Nature. 1982 Jun 3;297(5865):434-6 PMID: 7078654
  14. Complete nucleotide sequence of a chicken H2b histone gene.
    J Biol Chem. 1982 Aug 10;257(15):8577-80 PMID: 7096326
  15. Independently evolving chicken histone H2B genes: identification of a ubiquitous H2B-specific 5' element.
    Nucleic Acids Res. 1982 Dec 11;10(23):7851-63 PMID: 6296794
  16. Sea urchin (lytechinus pictus) late-stage histone H3 and H4 genes: characterization and mapping of a clustered but nontandemly linked multigene family.
    Cell. 1982 Dec;31(2 Pt 1):383-93 PMID: 6297764
  17. Changes in nucleosomal core histone variants during chicken development and maturation.
    Dev Biol. 1983 Feb;95(2):421-8 PMID: 6825941
  18. A photoinduced cleavage of DNA useful for determining T residues.
    Nucleic Acids Res. 1982 Dec 20;10(24):7959-64 PMID: 7162986
  19. The chicken H5 gene is unlinked to core and H1 histone genes.
    Nucleic Acids Res. 1983 Feb 11;11(3):619-27 PMID: 6300759
  20. H2A.F: an extremely variant histone H2A sequence expressed in the chicken embryo.
    Proc Natl Acad Sci U S A. 1983 May;80(10):2819-23 PMID: 6574451
  21. Genomic organization, DNA sequence, and expression of chicken embryonic histone genes.
    J Biol Chem. 1983 Jul 25;258(14):9005-16 PMID: 6190814
  22. The genes coding for histone H3 and H4 in Neurospora crassa are unique and contain intervening sequences.
    Nucleic Acids Res. 1983 Aug 25;11(16):5347-60 PMID: 6310494
  23. Genomic organization of the genes coding for the six main histones of the chicken: complete sequence of the H5 gene.
    J Mol Biol. 1983 Nov 15;170(4):843-59 PMID: 6315952
  24. Regulation of histone mRNA production and stability in serum-stimulated mouse 3T6 fibroblasts.
    Mol Cell Biol. 1983 Nov;3(11):1920-9 PMID: 6656760
  25. Inverted duplication of histone genes in chicken and disposition of regulatory sequences.
    Nucleic Acids Res. 1985 Feb 25;13(4):1369-87 PMID: 4000938
  26. Replacement variant histone genes contain intervening sequences.
    Mol Cell Biol. 1985 Jun;5(6):1307-17 PMID: 2863747
  27. Amino-acid sequence of slightly lysine-rich histone.
    Nature. 1970 Jun 13;226(5250):1056-8 PMID: 5463128
  28. Detection of specific sequences among DNA fragments separated by gel electrophoresis.
    J Mol Biol. 1975 Nov 5;98(3):503-17 PMID: 1195397
  29. 3' non-coding region sequences in eukaryotic messenger RNA.
    Nature. 1976 Sep 16;263(5574):211-4 PMID: 822353
  30. Genomic organization and nucleotide sequence of two distinct histone gene clusters from Xenopus laevis. Identification of novel conserved upstream sequence elements.
    J Mol Biol. 1985 Oct 5;185(3):479-99 PMID: 3863963
  31. Globin mRNA sequences: analysis of base pairing and evolutionary implications.
    Cold Spring Harb Symp Quant Biol. 1978;42 Pt 2:985-1002 PMID: 277330
  32. Isolation and characterization of the histone variants in chicken erythrocytes.
    Biochemistry. 1979 Sep 4;18(18):3952-60 PMID: 486404
  33. Isolation of the chicken beta-globin gene and a linked embryonic beta-like globin gene from a chicken DNA recombinant library.
    Cell. 1979 Aug;17(4):879-87 PMID: 158428
  34. Isolation of yeast histone genes H2A and H2B.
    Cell. 1979 Dec;18(4):1261-71 PMID: 519767
  35. Sequencing end-labeled DNA with base-specific chemical cleavages.
    Methods Enzymol. 1980;65(1):499-560 PMID: 6246368
  36. Nucleotide sequence of the E coli gene coding for dihydrofolate reductase.
    Nucleic Acids Res. 1980 May 24;8(10):2255-74 PMID: 6159575
Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
0305-1048
Published
1987-02-11
Pages
1063-80
Language
English
Region
England
NLM ID
0411011
PMCID
PMC340508
Subset
IM
Grants
NIGMS NIH HHS · GM 29687 · United States
Databases
GENBANK
X05094, X05095, X05096, X05097, X05098, X05099
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com