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PMID: 2823225 Published · ppublish English Journal Article

Contribution of different GC-motifs to the control of simian virus 40 late promoter activity.

Nucleic acids research ·Vol. 15 ·No. 20 ·1987-10-26 ·Pages 8177-93

Ernoult-Lange M, Omilli F, May E

Abstract

During the course of lytic infection the 21-bp repeat region regulates differentially the late gene expression; a mutant deleted for this region expresses late genes either to a higher level in the absence of T antigen or to a lower level in the late phase of infection as compared to wild type (23). By analysing a series of clustered point mutations generated within the GC-motifs we show that i) mutations within motifs I and II stimulate late transcription two to three-fold, suggesting that competition for transcription machinery between early-early and late promoters is mediated by these two motifs, ii) after viral replication, simultaneous mutations within motifs IV, V and VI decrease to 23% the efficiency of late transcription, indicating that these motifs are elements of the late promoter. Moreover comparison of results presented in this paper with results published by Barrera-Saldana et al. strongly suggest that late-early and late promoters are regulated in a similar manner.

MeSH Terms
Animals Base Composition Cell Line Cytosine DNA Restriction Enzymes Genes, Viral Guanine Mutation Nucleotide Mapping Plasmids Promoter Regions, Genetic RNA, Messenger/genetics Repetitive Sequences, Nucleic Acid Simian virus 40/genetics Transcription, Genetic Transfection
Chemicals
RNA, Messenger Guanine Cytosine DNA Restriction Enzymes
Authors & Affiliations
3 authors, click to expand affiliations / ORCID
Ernoult-Lange M
Laboratoire d'Oncologie Moléculaire, Institut de Recherches Scientifiques sur le Cancer, Villejuif, France.
Omilli F
May E
References (37)
37 references, click to expand
  1. Transcription from the SV40 early-early and late-early overlapping promoters in the absence of DNA replication.
    EMBO J. 1983;2(9):1605-11 PMID: 11892819
  2. Oligonucleotide-directed mutagenesis by microscale 'shot-gun' gene synthesis.
    Nucleic Acids Res. 1985 May 10;13(9):3305-16 PMID: 3889852
  3. Autoregulation of simian virus 40 gene A by T antigen.
    Proc Natl Acad Sci U S A. 1976 Sep;73(9):3083-7 PMID: 184459
  4. Regulation of early and late simian virus 40 transcription: overproduction of early viral RNA in the absence of a functional T-antigen.
    J Virol. 1977 Jul;23(1):167-76 PMID: 196100
  5. Gaps and duplicated sequences in the leaders of SV40 16S RNA.
    Nucleic Acids Res. 1978 Nov;5(11):4195-213 PMID: 82936
  6. Heterogeneity and 5'-terminal structures of the late RNAs of simian virus 40.
    J Mol Biol. 1978 Dec 25;126(4):813-46 PMID: 218021
  7. Heterogeneity of the 5' terminus of late mRNA induced by a viable simian virus 40 deletion mutant.
    J Virol. 1979 Aug;31(2):484-93 PMID: 225567
  8. Simian virus 40 early mRNA's contain multiple 5' termini upstream and downstream from a Hogness-Goldberg sequence; a shift in 5' termini during the lytic cycle is mediated by large T antigen.
    J Virol. 1981 Oct;40(1):224-40 PMID: 6270376
  9. Territorial limits and functional anatomy of the simian virus 40 replication origin.
    Proc Natl Acad Sci U S A. 1982 Jan;79(2):381-5 PMID: 6281769
  10. Deletion mapping of DNA regions required for SV40 early region promoter function in vivo.
    J Mol Appl Genet. 1982;1(5):457-81 PMID: 6296253
  11. The repeated GC-rich motifs upstream from the TATA box are important elements of the SV40 early promoter.
    Nucleic Acids Res. 1983 Apr 25;11(8):2447-64 PMID: 6304653
  12. Simian virus 40 early- and late-region promoter functions are enhanced by the 72-base-pair repeat inserted at distant locations and inverted orientations.
    Mol Cell Biol. 1983 Jun;3(6):991-9 PMID: 6308429
  13. Activation of the SV40 late promoter: direct effects of T antigen in the absence of viral DNA replication.
    Cell. 1984 Feb;36(2):381-9 PMID: 6319019
  14. Mutational dissection of the 21 bp repeat region of the SV40 early promoter reveals that it contains overlapping elements of the early-early and late-early promoters.
    Nucleic Acids Res. 1984 Jan 25;12(2):915-32 PMID: 6320125
  15. Sequences controlling in vitro transcription of SV40 promoters.
    EMBO J. 1983;2(12):2293-303 PMID: 6321158
  16. Simian virus 40 major late promoter: an upstream DNA sequence required for efficient in vitro transcription.
    Mol Cell Biol. 1984 Jan;4(1):133-41 PMID: 6321950
  17. Stimulation of simian virus 40 late gene expression by simian virus 40 tumor antigen.
    Proc Natl Acad Sci U S A. 1984 Apr;81(7):2040-4 PMID: 6201850
  18. Multiple control elements involved in the initiation of SV40 late transcription.
    J Mol Appl Genet. 1984;2(5):423-35 PMID: 6090561
  19. DNA replication and chromatin structure of simian virus 40 insertion mutants.
    Mol Cell Biol. 1984 Aug;4(8):1499-507 PMID: 6092914
  20. Analysis of an activatable promoter: sequences in the simian virus 40 late promoter required for T-antigen-mediated trans activation.
    Mol Cell Biol. 1985 Aug;5(8):1859-69 PMID: 3018532
  21. trans Activation of the simian virus 40 late transcription unit by T-antigen.
    Mol Cell Biol. 1985 Jun;5(6):1391-9 PMID: 2993862
  22. Bidirectional SV40 transcription mediated by tandem Sp1 binding interactions.
    Science. 1985 Nov 1;230(4725):511-7 PMID: 2996137
  23. Sequences involved in determining the locations of the 5' ends of the late RNAs of simian virus 40.
    J Virol. 1985 Dec;56(3):1002-13 PMID: 2999418
  24. All six GC-motifs of the SV40 early upstream element contribute to promoter activity in vivo and in vitro.
    EMBO J. 1985 Dec 30;4(13B):3839-49 PMID: 3004974
  25. Multiple sequence motifs are involved in SV40 enhancer function.
    EMBO J. 1986 Feb;5(2):387-97 PMID: 3011406
  26. Characterization of the simian virus 40 late promoter: relative importance of sequences within the 72-base-pair repeats differs before and after viral DNA replication.
    J Virol. 1987 Jan;61(1):167-76 PMID: 3023694
  27. Functional organization of the simian virus 40 origin of DNA replication.
    Mol Cell Biol. 1986 Apr;6(4):1117-28 PMID: 3023870
  28. Sequences involved in initiation of simian virus 40 late transcription in the absence of T antigen.
    Mol Cell Biol. 1986 Jun;6(6):1875-85 PMID: 3023909
  29. SV40 late promoter: contribution of the initiation site sequences to basal late promoter activity.
    Virology. 1987 Mar;157(1):232-5 PMID: 3029961
  30. The sequence motifs that are involved in SV40 enhancer function also control SV40 late promoter activity.
    Nucleic Acids Res. 1987 Mar 25;15(6):2445-61 PMID: 3031598
  31. T antigen repression of SV40 early transcription from two promoters.
    Cell. 1981 Dec;27(3 Pt 2):603-13 PMID: 6101224
  32. Complex regulation of simian virus 40 early-region transcription from different overlapping promoters.
    Mol Cell Biol. 1984 Sep;4(9):1900-14 PMID: 6092946
  33. The simian virus 40 minimal origin and the 72-base-pair repeat are required simultaneously for efficient induction of late gene expression with large tumor antigen.
    Proc Natl Acad Sci U S A. 1984 Oct;81(20):6335-9 PMID: 6093097
  34. Effect of the 21-bp repeat upstream element on in vitro transcription from the early and late SV40 promoters.
    EMBO J. 1984 Oct;3(10):2373-82 PMID: 6094181
  35. Simian virus 40 guanine-cytosine-rich sequences function as independent transcriptional control elements in vitro.
    Mol Cell Biol. 1984 Dec;4(12):2911-20 PMID: 6098828
  36. Characterization of a surrogate TATA box promoter that regulates in vitro transcription of the simian virus 40 major late gene.
    Mol Cell Biol. 1985 Mar;5(3):591-4 PMID: 2985959
  37. Regulation of tumor antigen synthesis by simain virus 40 gene A.
    J Virol. 1975 Jul;16(1):168-78 PMID: 166203
Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
0305-1048
Published
1987-10-26
Pages
8177-93
Language
English
Region
England
NLM ID
0411011
PMCID
PMC306352
Subset
IM
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