Home LiteratureArticle Details
PMID: 6308429 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S. Research Support, U.S. Gov't, P.H.S.

Simian virus 40 early- and late-region promoter functions are enhanced by the 72-base-pair repeat inserted at distant locations and inverted orientations.

Molecular and cellular biology ·Vol. 3 ·No. 6 ·1983-06-00 ·Pages 991-9

Fromm M, Berg P

Abstract

Tandemly repeated 72-base-pair (bp) segments located between nucleotides 107 and 250 of the simian virus 40 genome are essential for early region transcription. The functional requirement for the 72-bp repeat was supplied even when that segment was translocated to several locations distant from, and in different orientation, relative to, the promoter. Regardless of the position of the 72-bp enhancer segment, transcription was initiated at the same locations as with the normal promoter. Translocation of the 72-bp repeat segment to other sites in the genome resulted in the appearance of DNase I hypersensitivity at that site in the intranuclear viral minichromosomes. One of the translocations which did not produce enhancement of early- and late-region expression also failed to create a DNase I-hypersensitive site at the translocated 72-bp segment.

MeSH Terms
Base Sequence DNA, Viral/genetics Deoxyribonucleases/metabolism Gene Expression Regulation Genetic Linkage Mutation Operon Repetitive Sequences, Nucleic Acid Simian virus 40/genetics Transcription, Genetic
Chemicals
DNA, Viral Deoxyribonucleases
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Fromm M
Berg P
References (37)
37 references, click to expand
  1. Purification of biologically active globin messenger RNA by chromatography on oligothymidylic acid-cellulose.
    Proc Natl Acad Sci U S A. 1972 Jun;69(6):1408-12 PMID: 4504350
  2. Defective simian virus 40 genomes: isolation and growth of individual clones.
    Virology. 1974 Nov;62(1):112-24 PMID: 4370797
  3. Detection of specific sequences among DNA fragments separated by gel electrophoresis.
    J Mol Biol. 1975 Nov 5;98(3):503-17 PMID: 1195397
  4. Construction and analysis of viable deletion mutants of simian virus 40.
    J Virol. 1976 May;18(2):664-71 PMID: 178902
  5. Labeling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase I.
    J Mol Biol. 1977 Jun 15;113(1):237-51 PMID: 881736
  6. Spliced early mRNAs of simian virus 40.
    Proc Natl Acad Sci U S A. 1978 Mar;75(3):1274-8 PMID: 206891
  7. Assembly of newly replicated chromatin.
    Cell. 1978 Nov;15(3):969-77 PMID: 103629
  8. Sites in simian virus 40 chromatin which are preferentially cleaved by endonucleases.
    Cell. 1978 Dec;15(4):1511-8 PMID: 215331
  9. A stretch of "late" SV40 viral DNA about 400 bp long which includes the origin of replication is specifically exposed in SV40 minichromosomes.
    Cell. 1979 Feb;16(2):453-66 PMID: 222461
  10. Mapping of RNA by a modification of the Berk-Sharp procedure: the 5' termini of 15 S beta-globin mRNA precursor and mature 10 s beta-globin mRNA have identical map coordinates.
    Nucleic Acids Res. 1979 Nov 10;7(5):1175-93 PMID: 390497
  11. Regulatory sequences involved in the promotion and termination of RNA transcription.
    Annu Rev Genet. 1979;13:319-53 PMID: 94251
  12. Identification of regulatory sequences in the prelude sequences of an H2A histone gene by the study of specific deletion mutants in vivo.
    Proc Natl Acad Sci U S A. 1980 Mar;77(3):1432-6 PMID: 6929494
  13. Absence of nucleosomes in a fraction of SV40 chromatin between the origin of replication and the region coding for the late leader RNA.
    Cell. 1980 May;20(1):65-73 PMID: 6248237
  14. E. coli RNA polymerase interacts homologously with two different promoters.
    Cell. 1980 Jun;20(2):269-81 PMID: 6248238
  15. Endonuclease-sensitive regions in SV40 chromatin from cells infected with duplicated mutants.
    Virology. 1980 Jul 30;104(2):462-73 PMID: 6249038
  16. Deletions covering the putative promoter region of early mRNAs of simian virus 40 do not abolish T-antigen expression.
    Proc Natl Acad Sci U S A. 1980 Jul;77(7):3865-9 PMID: 6253995
  17. Hybridization of denatured RNA and small DNA fragments transferred to nitrocellulose.
    Proc Natl Acad Sci U S A. 1980 Sep;77(9):5201-5 PMID: 6159641
  18. High efficiency transformation by direct microinjection of DNA into cultured mammalian cells.
    Cell. 1980 Nov;22(2 Pt 2):479-88 PMID: 6256082
  19. In vivo sequence requirements of the SV40 early promotor region.
    Nature. 1981 Mar 26;290(5804):304-10 PMID: 6259538
  20. Spacer DNA sequences upstream of the T-A-T-A-A-A-T-A sequence are essential for promotion of H2A histone gene transcription in vivo.
    Proc Natl Acad Sci U S A. 1980 Dec;77(12):7102-6 PMID: 6938957
  21. Identification of a promoter component involved in positioning the 5' termini of simian virus 40 early mRNAs.
    Proc Natl Acad Sci U S A. 1981 Jan;78(1):100-4 PMID: 6264425
  22. Analysis of transcriptional regulatory signals of the HSV thymidine kinase gene: identification of an upstream control region.
    Cell. 1981 Aug;25(2):385-98 PMID: 6269744
  23. Transcriptional control regions: nucleotide sequence requirements for initiation by RNA polymerase II and III.
    Curr Top Microbiol Immunol. 1981;93:25-46 PMID: 7026181
  24. Simian virus 40 early mRNA's contain multiple 5' termini upstream and downstream from a Hogness-Goldberg sequence; a shift in 5' termini during the lytic cycle is mediated by large T antigen.
    J Virol. 1981 Oct;40(1):224-40 PMID: 6270376
  25. The appearance of DNase I hypersensitive sites at the 5' end of the late SV40 genes is correlated with the transcriptional switch.
    Nucleic Acids Res. 1981 Nov 25;9(22):5949-64 PMID: 6273814
  26. The SV40 72 base repair repeat has a striking effect on gene expression both in SV40 and other chimeric recombinants.
    Nucleic Acids Res. 1981 Nov 25;9(22):6047-68 PMID: 6273820
  27. DNA sequences necessary for transcription of the rabbit beta-globin gene in vivo.
    Nature. 1982 Jan 14;295(5845):120-6 PMID: 6276753
  28. Identification of DNA sequences required for transcription of the human alpha 1-globin gene in a new SV40 host-vector system.
    Cell. 1981 Dec;27(2 Pt 1):279-88 PMID: 6277501
  29. Expression of a beta-globin gene is enhanced by remote SV40 DNA sequences.
    Cell. 1981 Dec;27(2 Pt 1):299-308 PMID: 6277502
  30. Simian virus 40-rabbit beta-globin recombinants lacking late mRNA splice sites express cytoplasmic RNAs with altered structures.
    J Virol. 1982 Apr;42(1):262-74 PMID: 6283144
  31. Transcriptional control signals of a eukaryotic protein-coding gene.
    Science. 1982 Jul 23;217(4557):316-24 PMID: 6283634
  32. The TATA homology and the mRNA 5' untranslated sequence are not required for expression of essential adenovirus E1A functions.
    Cell. 1982 May;29(1):139-48 PMID: 7105179
  33. Fine structure of the regulatory region of simian virus 40 minichromosomes revealed by DNAase I digestion.
    J Mol Biol. 1982 Sep 15;160(2):133-46 PMID: 6294304
  34. Deletion mapping of DNA regions required for SV40 early region promoter function in vivo.
    J Mol Appl Genet. 1982;1(5):457-81 PMID: 6296253
  35. Deletion mutants which affect the nuclease-sensitive site in simian virus 40 chromatin.
    Mol Cell Biol. 1982 Jul;2(7):782-8 PMID: 6100912
  36. DNAase I-hypersensitive sites of chromatin.
    Cell. 1981 Dec;27(3 Pt 2):413-5 PMID: 6101195
  37. T antigen repression of SV40 early transcription from two promoters.
    Cell. 1981 Dec;27(3 Pt 2):603-13 PMID: 6101224
Article Info
Journal
Molecular and cellular biology
Abbr.
Mol Cell Biol
ISSN
0270-7306
Published
1983-06-00
Pages
991-9
Language
English
Region
United States
NLM ID
8109087
PMCID
PMC368628
Subset
IM
Grants
NIGMS NIH HHS · 5-T32GM-07599 · United States
NCI NIH HHS · CA-15513 · United States
NIGMS NIH HHS · GM-13235 · United States
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com