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PMID: 2762147 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Isolation of human cDNA clones of ski and the ski-related gene, sno.

Nucleic acids research ·Vol. 17 ·No. 14 ·1989-07-25 ·Pages 5489-500

Nomura N, Sasamoto S, Ishii S, Date T, Matsui M, Ishizaki R

Abstract

cDNA clones of ski and the ski-related gene, sno, were obtained by screening human cDNA libraries. The predicted open reading frame of h-ski could encode a protein of 728 amino acid residues. The h-ski protein is highly homologous with the v-ski protein. The overall homology between h-ski and v-ski is 91% at the amino acid level. DNA sequencing analysis revealed two types of cDNA clones from the sno (ski-related novel gene) gene, possibly due to alternative splicing. The first type, named snoN (non Alu-containing), encoded a protein of 684 amino acid residues. The second type, named snoA (Alu-containing), encoded a protein of 415 amino acid residues. The first 366 amino acid residues of snoN and snoA are the same, but subsequent amino acids show divergence. Several transcripts of h-ski (6.0, 4.7, 3.8, 3.0, 2.1 and 1.8 kb) were detected. The mRNAs of h-sno were 6.2, 4.4 and 3.2kb.

MeSH Terms
Amino Acid Sequence Animals Base Sequence Biological Evolution Cell Line DNA/genetics,isolation & purification DNA, Neoplasm/genetics,isolation & purification DNA-Binding Proteins Humans Intracellular Signaling Peptides and Proteins Molecular Sequence Data Multigene Family Oncogenes Proteins/genetics Proto-Oncogene Proteins Sequence Homology, Nucleic Acid Software
Chemicals
DNA, Neoplasm DNA-Binding Proteins Intracellular Signaling Peptides and Proteins Proteins Proto-Oncogene Proteins SKIL protein, human SKI protein, human DNA
Authors & Affiliations
6 authors, click to expand affiliations / ORCID
Nomura N
Molecular Oncology Laboratory, Nippon Veterinary and Zootechnical College, Tokyo, Japan.
Sasamoto S
Ishii S
Date T
Matsui M
Ishizaki R
References (43)
43 references, click to expand
  1. Detection of specific sequences among DNA fragments separated by gel electrophoresis.
    J Mol Biol. 1975 Nov 5;98(3):503-17 PMID: 1195397
  2. Isolation of human cDNA clones of myb-related genes, A-myb and B-myb.
    Nucleic Acids Res. 1988 Dec 9;16(23):11075-89 PMID: 3060855
  3. DNA sequencing with chain-terminating inhibitors.
    Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7 PMID: 271968
  4. Number and evolutionary conservation of alpha- and beta-tubulin and cytoplasmic beta- and gamma-actin genes using specific cloned cDNA probes.
    Cell. 1980 May;20(1):95-105 PMID: 6893015
  5. Generation of transforming viruses in cultures of chicken fibroblasts infected with an avian leukosis virus.
    J Virol. 1981 Sep;39(3):920-34 PMID: 6169846
  6. Base sequence studies of 300 nucleotide renatured repeated human DNA clones.
    J Mol Biol. 1981 Sep 5;151(1):17-33 PMID: 6276559
  7. Amplified DNA with limited homology to myc cellular oncogene is shared by human neuroblastoma cell lines and a neuroblastoma tumour.
    Nature. 1983 Sep 15-21;305(5931):245-8 PMID: 6888561
  8. Hybridization of denatured RNA transferred or dotted nitrocellulose paper.
    Methods Enzymol. 1983;100:255-66 PMID: 6194404
  9. Transposition and amplification of oncogene-related sequences in human neuroblastomas.
    Cell. 1983 Dec;35(2 Pt 1):359-67 PMID: 6197179
  10. Use of statistical criteria for screening potential homologies in nucleic acid sequences.
    Nucleic Acids Res. 1984 Jan 11;12(1 Pt 1):203-13 PMID: 6694901
  11. A comprehensive set of sequence analysis programs for the VAX.
    Nucleic Acids Res. 1984 Jan 11;12(1 Pt 1):387-95 PMID: 6546423
  12. Compilation and analysis of sequences upstream from the translational start site in eukaryotic mRNAs.
    Nucleic Acids Res. 1984 Jan 25;12(2):857-72 PMID: 6694911
  13. Chromogenic immunodetection of human serum albumin and alpha-L-fucosidase clones in a human hepatoma cDNA expression library.
    DNA. 1984 Dec;3(6):437-47 PMID: 6096099
  14. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors.
    Gene. 1985;33(1):103-19 PMID: 2985470
  15. Structure and expression of B-myc, a new member of the myc gene family.
    Mol Cell Biol. 1988 Aug;8(8):3168-74 PMID: 2850482
  16. jun-D: a third member of the jun gene family.
    Proc Natl Acad Sci U S A. 1989 Mar;86(5):1500-3 PMID: 2493644
  17. The product of a novel growth factor activated gene, fos B, interacts with JUN proteins enhancing their DNA binding activity.
    EMBO J. 1989 Mar;8(3):805-13 PMID: 2498083
  18. Nucleotide sequence of a full-length complementary DNA clone and amino acid sequence of human phenylalanine hydroxylase.
    Biochemistry. 1985 Jan 29;24(3):556-61 PMID: 2986678
  19. Cloning and characterization of two cDNAs coding for human von Willebrand factor.
    Proc Natl Acad Sci U S A. 1985 Oct;82(19):6394-8 PMID: 2864688
  20. Cloning of the human estrogen receptor cDNA.
    Proc Natl Acad Sci U S A. 1985 Dec;82(23):7889-93 PMID: 3865204
  21. Unique sequence, ski, in Sloan-Kettering avian retroviruses with properties of a new cell-derived oncogene.
    J Virol. 1986 Mar;57(3):1065-72 PMID: 3754014
  22. Transforming Sloan-Kettering viruses generated from the cloned v-ski oncogene by in vitro and in vivo recombinations.
    J Virol. 1986 Mar;57(3):1073-83 PMID: 3005612
  23. Improvement of the dideoxy chain termination method of DNA sequencing by use of deoxy-7-deazaguanosine triphosphate in place of dGTP.
    Nucleic Acids Res. 1986 Feb 11;14(3):1319-24 PMID: 3951988
  24. Polyproteins containing a domain encoded by the V-SKI oncogene are located in the nuclei of SKV-transformed cells.
    Virology. 1986 May;151(1):131-8 PMID: 3008428
  25. Cloning and sequence analysis of complementary DNA encoding an aberrantly rearranged human T-cell gamma chain.
    Proc Natl Acad Sci U S A. 1986 Apr;83(8):2619-23 PMID: 3458221
  26. Isolation of cDNA clones encoding the 20K non-glycosylated polypeptide chain of the human T-cell receptor/T3 complex.
    Nature. 1986 May 22-28;321(6068):431-4 PMID: 3012357
  27. Human cholesterol side-chain cleavage enzyme, P450scc: cDNA cloning, assignment of the gene to chromosome 15, and expression in the placenta.
    Proc Natl Acad Sci U S A. 1986 Dec;83(23):8962-6 PMID: 3024157
  28. Neuronal pp60c-src contains a six-amino acid insertion relative to its non-neuronal counterpart.
    Science. 1987 Jul 24;237(4813):411-5 PMID: 2440106
  29. erg, a human ets-related gene on chromosome 21: alternative splicing, polyadenylation, and translation.
    Science. 1987 Aug 7;237(4815):635-9 PMID: 3299708
  30. A thousand and one protein kinases.
    Cell. 1987 Sep 11;50(6):823-9 PMID: 3113737
  31. The first intron in the human c-abl gene is at least 200 kilobases long and is a target for translocations in chronic myelogenous leukemia.
    Mol Cell Biol. 1987 Sep;7(9):3231-6 PMID: 3313010
  32. A human retinoic acid receptor which belongs to the family of nuclear receptors.
    Nature. 1987 Dec 3-9;330(6147):444-50 PMID: 2825025
  33. Human proto-oncogene c-jun encodes a DNA binding protein with structural and functional properties of transcription factor AP-1.
    Science. 1987 Dec 4;238(4832):1386-92 PMID: 2825349
  34. Structure and expression of the human L-myc gene reveal a complex pattern of alternative mRNA processing.
    Mol Cell Biol. 1988 Jan;8(1):186-95 PMID: 2827002
  35. Alternative processing of RNA transcribed from NMYC.
    Mol Cell Biol. 1987 Dec;7(12):4266-72 PMID: 3437890
  36. Two lck transcripts containing different 5' untranslated regions are present in T cells.
    Mol Cell Biol. 1987 Dec;7(12):4407-13 PMID: 3501824
  37. A gene activated by growth factors is related to the oncogene v-jun.
    Proc Natl Acad Sci U S A. 1988 Mar;85(5):1487-91 PMID: 3422745
  38. Oncogene jun encodes a sequence-specific trans-activator similar to AP-1.
    Nature. 1988 Mar 10;332(6160):166-71 PMID: 3347253
  39. The steroid and thyroid hormone receptor superfamily.
    Science. 1988 May 13;240(4854):889-95 PMID: 3283939
  40. Fos-associated protein p39 is the product of the jun proto-oncogene.
    Science. 1988 May 20;240(4855):1010-6 PMID: 3130660
  41. fra-1: a serum-inducible, cellular immediate-early gene that encodes a fos-related antigen.
    Mol Cell Biol. 1988 May;8(5):2063-9 PMID: 3133553
  42. The human L-myc gene encodes multiple nuclear phosphoproteins from alternatively processed mRNAs.
    Mol Cell Biol. 1988 Oct;8(10):4381-8 PMID: 3054516
  43. The reverse transcriptase.
    Biochim Biophys Acta. 1977 Mar 21;473(1):1-38 PMID: 66065
Article Info
Journal
Nucleic acids research
Abbr.
Nucleic Acids Res
ISSN
0305-1048
Published
1989-07-25
Pages
5489-500
Language
English
Region
England
NLM ID
0411011
PMCID
PMC318172
Subset
IM
Databases
GENBANK
X15217, X15218, X15219
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