-
Definition of clinically distinct molecular subtypes in estrogen receptor-positive breast carcinomas through genomic grade.
J Clin Oncol. 2007 Apr 1;25(10):1239-46
PMID: 17401012
-
Thirty-gene pharmacogenomic test correlates with residual cancer burden after preoperative chemotherapy for breast cancer.
Clin Cancer Res. 2007 Jul 15;13(14):4078-82
PMID: 17634532
-
Microarray-based class discovery for molecular classification of breast cancer: analysis of interobserver agreement.
J Natl Cancer Inst. 2011 Apr 20;103(8):662-73
PMID: 21421860
-
Identification of markers of taxane sensitivity using proteomic and genomic analyses of breast tumors from patients receiving neoadjuvant paclitaxel and radiation.
Clin Cancer Res. 2010 Jan 15;16(2):681-90
PMID: 20068102
-
Challenges in projecting clustering results across gene expression-profiling datasets.
J Natl Cancer Inst. 2007 Nov 21;99(22):1715-23
PMID: 18000217
-
The predictive value of the 70-gene signature for adjuvant chemotherapy in early breast cancer.
Breast Cancer Res Treat. 2010 Apr;120(3):655-61
PMID: 20204499
-
Amplification of LAPTM4B and YWHAZ contributes to chemotherapy resistance and recurrence of breast cancer.
Nat Med. 2010 Feb;16(2):214-8
PMID: 20098429
-
Identification of molecular apocrine breast tumours by microarray analysis.
Oncogene. 2005 Jul 7;24(29):4660-71
PMID: 15897907
-
A multigene assay to predict recurrence of tamoxifen-treated, node-negative breast cancer.
N Engl J Med. 2004 Dec 30;351(27):2817-26
PMID: 15591335
-
Use of 70-gene signature to predict prognosis of patients with node-negative breast cancer: a prospective community-based feasibility study (RASTER).
Lancet Oncol. 2007 Dec;8(12):1079-1087
PMID: 18042430
-
Origins of breast cancer subtypes and therapeutic implications.
Nat Clin Pract Oncol. 2007 Sep;4(9):516-25
PMID: 17728710
-
Gene pathways associated with prognosis and chemotherapy sensitivity in molecular subtypes of breast cancer.
J Natl Cancer Inst. 2011 Feb 2;103(3):264-72
PMID: 21191116
-
Gene expression profiling in breast cancer: understanding the molecular basis of histologic grade to improve prognosis.
J Natl Cancer Inst. 2006 Feb 15;98(4):262-72
PMID: 16478745
-
Concordance among gene-expression-based predictors for breast cancer.
N Engl J Med. 2006 Aug 10;355(6):560-9
PMID: 16899776
-
Gene expression profiling for the prediction of therapeutic response to docetaxel in patients with breast cancer.
Lancet. 2003 Aug 2;362(9381):362-9
PMID: 12907009
-
Do predictive signatures really predict response to cancer chemotherapy?
Cell Cycle. 2010 Dec 15;9(24):4836-40
PMID: 21150277
-
The Gene expression Grade Index: a potential predictor of relapse for endocrine-treated breast cancer patients in the BIG 1-98 trial.
BMC Med Genomics. 2009 Jul 02;2:40
PMID: 19573224
-
Gene expression signature predicting pathologic complete response with gemcitabine, epirubicin, and docetaxel in primary breast cancer.
J Clin Oncol. 2006 Apr 20;24(12):1839-45
PMID: 16622258
-
Prediction of docetaxel response in human breast cancer by gene expression profiling.
J Clin Oncol. 2005 Jan 20;23(3):422-31
PMID: 15659489
-
HOXB13-to-IL17BR expression ratio is related with tumor aggressiveness and response to tamoxifen of recurrent breast cancer: a retrospective study.
J Clin Oncol. 2007 Feb 20;25(6):662-8
PMID: 17308270
-
Biological processes associated with breast cancer clinical outcome depend on the molecular subtypes.
Clin Cancer Res. 2008 Aug 15;14(16):5158-65
PMID: 18698033
-
Robustness, scalability, and integration of a wound-response gene expression signature in predicting breast cancer survival.
Proc Natl Acad Sci U S A. 2005 Mar 8;102(10):3738-43
PMID: 15701700
-
American Society of Clinical Oncology 2007 update of recommendations for the use of tumor markers in breast cancer.
J Clin Oncol. 2007 Nov 20;25(33):5287-312
PMID: 17954709
-
Repeated observation of breast tumor subtypes in independent gene expression data sets.
Proc Natl Acad Sci U S A. 2003 Jul 8;100(14):8418-23
PMID: 12829800
-
Clinical application of the 70-gene profile: the MINDACT trial.
J Clin Oncol. 2008 Feb 10;26(5):729-35
PMID: 18258980
-
Histological and molecular types of breast cancer: is there a unifying taxonomy?
Nat Rev Clin Oncol. 2009 Dec;6(12):718-30
PMID: 19942925
-
Assessment of an RNA interference screen-derived mitotic and ceramide pathway metagene as a predictor of response to neoadjuvant paclitaxel for primary triple-negative breast cancer: a retrospective analysis of five clinical trials.
Lancet Oncol. 2010 Apr;11(4):358-65
PMID: 20189874
-
Gene expression profiling predicts clinical outcome of breast cancer.
Nature. 2002 Jan 31;415(6871):530-6
PMID: 11823860
-
Breast cancer prognostic classification in the molecular era: the role of histological grade.
Breast Cancer Res. 2010;12(4):207
PMID: 20804570
-
Utility of oncotype DX risk estimates in clinically intermediate risk hormone receptor-positive, HER2-normal, grade II, lymph node-negative breast cancers.
Cancer. 2010 Nov 15;116(22):5161-7
PMID: 20665886
-
Outcome signature genes in breast cancer: is there a unique set?
Bioinformatics. 2005 Jan 15;21(2):171-8
PMID: 15308542
-
Molecular heterogeneity of breast carcinomas and the cancer stem cell hypothesis.
Nat Rev Cancer. 2007 Oct;7(10):791-9
PMID: 17851544
-
A population-based study of tumor gene expression and risk of breast cancer death among lymph node-negative patients.
Breast Cancer Res. 2006;8(3):R25
PMID: 16737553
-
A robust classifier of high predictive value to identify good prognosis patients in ER-negative breast cancer.
Breast Cancer Res. 2008;10(4):R73
PMID: 18755024
-
Are clusters found in one dataset present in another dataset?
Biostatistics. 2007 Jan;8(1):9-31
PMID: 16613834
-
Gene expression and benefit of chemotherapy in women with node-negative, estrogen receptor-positive breast cancer.
J Clin Oncol. 2006 Aug 10;24(23):3726-34
PMID: 16720680
-
Predicting prognosis using molecular profiling in estrogen receptor-positive breast cancer treated with tamoxifen.
BMC Genomics. 2008 May 22;9:239
PMID: 18498629
-
PIK3CA mutations associated with gene signature of low mTORC1 signaling and better outcomes in estrogen receptor-positive breast cancer.
Proc Natl Acad Sci U S A. 2010 Jun 1;107(22):10208-13
PMID: 20479250
-
The effect of the stromal component of breast tumours on prediction of clinical outcome using gene expression microarray analysis.
Breast Cancer Res. 2006;8(3):R32
PMID: 16790077
-
Stromal gene expression predicts clinical outcome in breast cancer.
Nat Med. 2008 May;14(5):518-27
PMID: 18438415
-
Molecular portraits of human breast tumours.
Nature. 2000 Aug 17;406(6797):747-52
PMID: 10963602
-
Phenotypic and molecular characterization of the claudin-low intrinsic subtype of breast cancer.
Breast Cancer Res. 2010;12(5):R68
PMID: 20813035
-
Calibration and discriminatory accuracy of prognosis calculation for breast cancer with the online Adjuvant! program: a hospital-based retrospective cohort study.
Lancet Oncol. 2009 Nov;10(11):1070-6
PMID: 19801202
-
Molecular classification of tamoxifen-resistant breast carcinomas by gene expression profiling.
J Clin Oncol. 2005 Feb 1;23(4):732-40
PMID: 15681518
-
BRCA1 basal-like breast cancers originate from luminal epithelial progenitors and not from basal stem cells.
Cell Stem Cell. 2010 Sep 3;7(3):403-17
PMID: 20804975
-
Prediction of risk of distant recurrence using the 21-gene recurrence score in node-negative and node-positive postmenopausal patients with breast cancer treated with anastrozole or tamoxifen: a TransATAC study.
J Clin Oncol. 2010 Apr 10;28(11):1829-34
PMID: 20212256
-
Rules of evidence for cancer molecular-marker discovery and validation.
Nat Rev Cancer. 2004 Apr;4(4):309-14
PMID: 15057290
-
Expression of concern--validation of gene signatures that predict the response of breast cancer to neoadjuvant chemotherapy: a substudy of the EORTC 10994/BIG 00-01 clinical trial.
Lancet Oncol. 2010 Sep;11(9):813-4
PMID: 20667781
-
Comparison of prognostic gene expression signatures for breast cancer.
BMC Genomics. 2008 Aug 21;9:394
PMID: 18717985
-
Gene expression profiles in paraffin-embedded core biopsy tissue predict response to chemotherapy in women with locally advanced breast cancer.
J Clin Oncol. 2005 Oct 10;23(29):7265-77
PMID: 16145055
-
Aberrant luminal progenitors as the candidate target population for basal tumor development in BRCA1 mutation carriers.
Nat Med. 2009 Aug;15(8):907-13
PMID: 19648928
-
Validation of gene signatures that predict the response of breast cancer to neoadjuvant chemotherapy: a substudy of the EORTC 10994/BIG 00-01 clinical trial.
Lancet Oncol. 2007 Dec;8(12):1071-1078
PMID: 18024211
-
Long-term outcome prediction by clinicopathological risk classification algorithms in node-negative breast cancer--comparison between Adjuvant!, St Gallen, and a novel risk algorithm used in the prospective randomized Node-Negative-Breast Cancer-3 (NNBC-3) trial.
Ann Oncol. 2009 Feb;20(2):258-64
PMID: 18824499
-
Metaplastic breast carcinomas are basal-like breast cancers: a genomic profiling analysis.
Breast Cancer Res Treat. 2009 Sep;117(2):273-80
PMID: 18815879
-
Strong time dependence of the 76-gene prognostic signature for node-negative breast cancer patients in the TRANSBIG multicenter independent validation series.
Clin Cancer Res. 2007 Jun 1;13(11):3207-14
PMID: 17545524
-
Prediction of cancer outcome with microarrays: a multiple random validation strategy.
Lancet. 2005 Feb 5-11;365(9458):488-92
PMID: 15705458
-
Genetic interactions in cancer progression and treatment.
Cell. 2011 Apr 1;145(1):30-8
PMID: 21458666
-
Molecular profiling currently offers no more than tumour morphology and basic immunohistochemistry.
Breast Cancer Res. 2010 Dec 20;12 Suppl 4:S5
PMID: 21172089
-
An aCGH classifier derived from BRCA1-mutated breast cancer and benefit of high-dose platinum-based chemotherapy in HER2-negative breast cancer patients.
Ann Oncol. 2011 Jul;22(7):1561-1570
PMID: 21135055
-
Gene-expression profiles to predict distant metastasis of lymph-node-negative primary breast cancer.
Lancet. 2005 Feb 19-25;365(9460):671-9
PMID: 15721472
-
Extracellular matrix signature identifies breast cancer subgroups with different clinical outcome.
J Pathol. 2008 Feb;214(3):357-67
PMID: 18044827
-
Meta-analysis of gene expression profiles in breast cancer: toward a unified understanding of breast cancer subtyping and prognosis signatures.
Breast Cancer Res. 2008;10(4):R65
PMID: 18662380
-
Supervised risk predictor of breast cancer based on intrinsic subtypes.
J Clin Oncol. 2009 Mar 10;27(8):1160-7
PMID: 19204204
-
Histological types of breast cancer: how special are they?
Mol Oncol. 2010 Jun;4(3):192-208
PMID: 20452298
-
Genomic index of sensitivity to endocrine therapy for breast cancer.
J Clin Oncol. 2010 Sep 20;28(27):4111-9
PMID: 20697068
-
Molecular classification of breast cancer: limitations and potential.
Oncologist. 2006 Sep;11(8):868-77
PMID: 16951390
-
A stroma-related gene signature predicts resistance to neoadjuvant chemotherapy in breast cancer.
Nat Med. 2009 Jan;15(1):68-74
PMID: 19122658
-
Gene expression profiles predict complete pathologic response to neoadjuvant paclitaxel and fluorouracil, doxorubicin, and cyclophosphamide chemotherapy in breast cancer.
J Clin Oncol. 2004 Jun 15;22(12):2284-93
PMID: 15136595
-
The HOXB13:IL17BR expression index is a prognostic factor in early-stage breast cancer.
J Clin Oncol. 2006 Oct 1;24(28):4611-9
PMID: 17008703
-
Introducing molecular subtyping of breast cancer into the clinic?
J Clin Oncol. 2009 Mar 10;27(8):1153-4
PMID: 19204193
-
Clinical evaluation of chemotherapy response predictors developed from breast cancer cell lines.
Breast Cancer Res Treat. 2010 Jun;121(2):301-9
PMID: 19603265
-
Triple-negative breast cancer.
N Engl J Med. 2010 Nov 11;363(20):1938-48
PMID: 21067385
-
Estrogen-regulated genes predict survival in hormone receptor-positive breast cancers.
J Clin Oncol. 2006 Apr 10;24(11):1656-64
PMID: 16505416
-
Mammary development meets cancer genomics.
Nat Med. 2009 Aug;15(8):842-4
PMID: 19661985
-
Molecular profiling: moving away from tumor philately.
Sci Transl Med. 2010 Sep 1;2(47):47ps43
PMID: 20811040
-
Clinical implementation of the intrinsic subtypes of breast cancer.
Lancet Oncol. 2010 Aug;11(8):718-9; author reply 720-1
PMID: 20688274
-
Genomic signatures to guide the use of chemotherapeutics.
Nat Med. 2006 Nov;12(11):1294-300
PMID: 17057710
-
Run batch effects potentially compromise the usefulness of genomic signatures for ovarian cancer.
J Clin Oncol. 2008 Mar 1;26(7):1186-7; author reply 1187-8
PMID: 18309960
-
The 70-gene signature as a response predictor for neoadjuvant chemotherapy in breast cancer.
Breast Cancer Res Treat. 2010 Feb;119(3):551-8
PMID: 19214742
-
Breast cancer molecular subtypes respond differently to preoperative chemotherapy.
Clin Cancer Res. 2005 Aug 15;11(16):5678-85
PMID: 16115903
-
Multicenter validation of a gene expression-based prognostic signature in lymph node-negative primary breast cancer.
J Clin Oncol. 2006 Apr 10;24(11):1665-71
PMID: 16505412
-
Molecular apocrine differentiation is a common feature of breast cancer in patients with germline PTEN mutations.
Breast Cancer Res. 2010;12(4):R63
PMID: 20712882
-
A comparison of PAM50 intrinsic subtyping with immunohistochemistry and clinical prognostic factors in tamoxifen-treated estrogen receptor-positive breast cancer.
Clin Cancer Res. 2010 Nov 1;16(21):5222-32
PMID: 20837693
-
Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications.
Proc Natl Acad Sci U S A. 2001 Sep 11;98(19):10869-74
PMID: 11553815
-
PSMB7 is associated with anthracycline resistance and is a prognostic biomarker in breast cancer.
Br J Cancer. 2010 Jan 19;102(2):361-8
PMID: 20010949
-
Characterization of a naturally occurring breast cancer subset enriched in epithelial-to-mesenchymal transition and stem cell characteristics.
Cancer Res. 2009 May 15;69(10):4116-24
PMID: 19435916
-
An immune response gene expression module identifies a good prognosis subtype in estrogen receptor negative breast cancer.
Genome Biol. 2007;8(8):R157
PMID: 17683518
-
Evaluation of a 30-gene paclitaxel, fluorouracil, doxorubicin, and cyclophosphamide chemotherapy response predictor in a multicenter randomized trial in breast cancer.
Clin Cancer Res. 2010 Nov 1;16(21):5351-61
PMID: 20829329
-
Prognostic utility of the 21-gene assay in hormone receptor-positive operable breast cancer compared with classical clinicopathologic features.
J Clin Oncol. 2008 Sep 1;26(25):4063-71
PMID: 18678838
-
Validation and clinical utility of a 70-gene prognostic signature for women with node-negative breast cancer.
J Natl Cancer Inst. 2006 Sep 6;98(17):1183-92
PMID: 16954471
-
A two-gene expression ratio predicts clinical outcome in breast cancer patients treated with tamoxifen.
Cancer Cell. 2004 Jun;5(6):607-16
PMID: 15193263
-
Molecular forecasting of breast cancer: time to move forward with clinical testing.
J Clin Oncol. 2006 Feb 1;24(4):721-2; author reply 722-3
PMID: 16446348
-
The contribution of gene expression profiling to breast cancer classification, prognostication and prediction: a retrospective of the last decade.
J Pathol. 2010 Jan;220(2):263-80
PMID: 19927298
-
Thresholds for therapies: highlights of the St Gallen International Expert Consensus on the primary therapy of early breast cancer 2009.
Ann Oncol. 2009 Aug;20(8):1319-29
PMID: 19535820
-
A gene-expression signature as a predictor of survival in breast cancer.
N Engl J Med. 2002 Dec 19;347(25):1999-2009
PMID: 12490681
-
Pharmacogenomic predictor of sensitivity to preoperative chemotherapy with paclitaxel and fluorouracil, doxorubicin, and cyclophosphamide in breast cancer.
J Clin Oncol. 2006 Sep 10;24(26):4236-44
PMID: 16896004
-
Prognostic and predictive value of the 21-gene recurrence score assay in postmenopausal women with node-positive, oestrogen-receptor-positive breast cancer on chemotherapy: a retrospective analysis of a randomised trial.
Lancet Oncol. 2010 Jan;11(1):55-65
PMID: 20005174
-
Repeatability of published microarray gene expression analyses.
Nat Genet. 2009 Feb;41(2):149-55
PMID: 19174838
-
Gene-expression signatures in breast cancer.
N Engl J Med. 2009 Feb 19;360(8):790-800
PMID: 19228622
-
Genomic grade index is associated with response to chemotherapy in patients with breast cancer.
J Clin Oncol. 2009 Jul 1;27(19):3185-91
PMID: 19364972
-
A multigene predictor of metastatic outcome in early stage hormone receptor-negative and triple-negative breast cancer.
Breast Cancer Res. 2010;12(5):R85
PMID: 20946665
-
Molecular subtypes in breast cancer evaluation and management: divide and conquer.
Cancer Invest. 2008 Feb;26(1):1-10
PMID: 18181038
-
Gene-expression-based prognostic assays for breast cancer.
Nat Rev Clin Oncol. 2010 Jun;7(6):340-7
PMID: 20440284
-
Development of the 21-gene assay and its application in clinical practice and clinical trials.
J Clin Oncol. 2008 Feb 10;26(5):721-8
PMID: 18258979
-
A five-gene molecular grade index and HOXB13:IL17BR are complementary prognostic factors in early stage breast cancer.
Clin Cancer Res. 2008 May 1;14(9):2601-8
PMID: 18451222
-
Breast cancer molecular profiling with single sample predictors: a retrospective analysis.
Lancet Oncol. 2010 Apr;11(4):339-49
PMID: 20181526
-
An estrogen receptor-negative breast cancer subset characterized by a hormonally regulated transcriptional program and response to androgen.
Oncogene. 2006 Jun 29;25(28):3994-4008
PMID: 16491124
-
Concordance of clinical and molecular breast cancer subtyping in the context of preoperative chemotherapy response.
Breast Cancer Res Treat. 2010 Jan;119(1):119-26
PMID: 19669409
-
The molecular portraits of breast tumors are conserved across microarray platforms.
BMC Genomics. 2006 Apr 27;7:96
PMID: 16643655
-
Microarrays: retracing steps.
Nat Med. 2007 Nov;13(11):1276-7; author reply 1277-8
PMID: 17987014
-
Genomics and the continuum of cancer care.
N Engl J Med. 2011 Jan 27;364(4):340-50
PMID: 21268726