Home LiteratureArticle Details
PMID: 20347427 Published · ppublish English Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, Non-P.H.S.

Regulation of chromatin architecture by the PWWP domain-containing DNA damage-responsive factor EXPAND1/MUM1.

Molecular cell ·Vol. 37 ·No. 6 ·2010-03-26 ·Pages 854-64

Huen MS, Huang J, Leung JW, Sy SM, Leung KM, Ching YP, Tsao SW, Chen J

Abstract

Dynamic changes of chromatin structure facilitate diverse biological events, including DNA replication, repair, recombination, and gene transcription. Recent evidence revealed that DNA damage elicits alterations to the chromatin to facilitate proper checkpoint activation and DNA repair. Here we report the identification of the PWWP domain-containing protein EXPAND1/MUM1 as an architectural component of the chromatin, which in response to DNA damage serves as an accessory factor to promote cell survival. Depletion of EXPAND1/MUM1 or inactivation of its PWWP domain resulted in chromatin compaction. Upon DNA damage, EXPAND1/MUM1 rapidly concentrates at the vicinity of DNA damage sites via its direct interaction with 53BP1. Ablation of this interaction impaired damage-induced chromatin decondensation, which is accompanied by sustained DNA damage and hypersensitivity to genotoxic stress. Collectively, our study uncovers a chromatin-bound factor that serves an accessory role in coupling damage signaling with chromatin changes in response to DNA damage.

MeSH Terms
Amino Acid Sequence Animals Cell Survival Cells, Cultured Chromatin/genetics,metabolism Chromosomal Proteins, Non-Histone/chemistry,genetics,metabolism DNA Damage DNA-Binding Proteins Humans Intracellular Signaling Peptides and Proteins/deficiency,metabolism Mice Molecular Sequence Data RNA, Small Interfering/genetics Response Elements Signal Transduction Tumor Suppressor p53-Binding Protein 1
Chemicals
Chromatin Chromosomal Proteins, Non-Histone DNA-Binding Proteins Intracellular Signaling Peptides and Proteins PWWP3A protein, human RNA, Small Interfering Trp53bp1 protein, mouse Tumor Suppressor p53-Binding Protein 1
Authors & Affiliations
8 authors, click to expand affiliations / ORCID
Huen Michael S Y
Department of Anatomy, The University of Hong Kong, L1, Laboratory Block, 21 Sassoon Road, Hong Kong SAR. huen.michael@hku.hk
Huang Jun
Leung Justin W C
Sy Shirley M-H
Leung Ka Man
Ching Yick-Pang
Tsao Sai Wah
Chen Junjie
References (37)
37 references, click to expand
  1. Mec1/Tel1 phosphorylation of the INO80 chromatin remodeling complex influences DNA damage checkpoint responses.
    Cell. 2007 Aug 10;130(3):499-511 PMID: 17693258
  2. BLM helicase-dependent and -independent roles of 53BP1 during replication stress-mediated homologous recombination.
    J Cell Biol. 2007 Jul 2;178(1):9-14 PMID: 17591918
  3. Binding of chromatin-modifying activities to phosphorylated histone H2A at DNA damage sites.
    Mol Cell. 2004 Dec 22;16(6):979-90 PMID: 15610740
  4. Competition between histone H1 and HMGN proteins for chromatin binding sites.
    EMBO Rep. 2002 Aug;3(8):760-6 PMID: 12151335
  5. PALB2 regulates recombinational repair through chromatin association and oligomerization.
    J Biol Chem. 2009 Jul 3;284(27):18302-10 PMID: 19423707
  6. RNF8 transduces the DNA-damage signal via histone ubiquitylation and checkpoint protein assembly.
    Cell. 2007 Nov 30;131(5):901-14 PMID: 18001825
  7. Histone H2AX phosphorylation is dispensable for the initial recognition of DNA breaks.
    Nat Cell Biol. 2003 Jul;5(7):675-9 PMID: 12792649
  8. PALB2 is an integral component of the BRCA complex required for homologous recombination repair.
    Proc Natl Acad Sci U S A. 2009 Apr 28;106(17):7155-60 PMID: 19369211
  9. The PWWP domain of mammalian DNA methyltransferase Dnmt3b defines a new family of DNA-binding folds.
    Nat Struct Biol. 2002 Mar;9(3):217-24 PMID: 11836534
  10. 53BP1 promotes non-homologous end joining of telomeres by increasing chromatin mobility.
    Nature. 2008 Nov 27;456(7221):524-8 PMID: 18931659
  11. Enhanced intra-switch region recombination during immunoglobulin class switch recombination in 53BP1-/- B cells.
    Eur J Immunol. 2007 Jan;37(1):235-9 PMID: 17183606
  12. Activation of ATM depends on chromatin interactions occurring before induction of DNA damage.
    Nat Cell Biol. 2009 Jan;11(1):92-6 PMID: 19079244
  13. Checkpoint signalling: focusing on 53BP1.
    Nat Cell Biol. 2002 Dec;4(12):E277-9 PMID: 12461529
  14. Human Rif1, ortholog of a yeast telomeric protein, is regulated by ATM and 53BP1 and functions in the S-phase checkpoint.
    Genes Dev. 2004 Sep 1;18(17):2108-19 PMID: 15342490
  15. Human mismatch repair protein MSH6 contains a PWWP domain that targets double stranded DNA.
    Biochemistry. 2008 Jun 10;47(23):6199-207 PMID: 18484749
  16. The BRCT domain is a phospho-protein binding domain.
    Science. 2003 Oct 24;302(5645):639-42 PMID: 14576433
  17. DNA damage-induced G2-M checkpoint activation by histone H2AX and 53BP1.
    Nat Cell Biol. 2002 Dec;4(12):993-7 PMID: 12447390
  18. 53BP1 links DNA damage-response pathways to immunoglobulin heavy chain class-switch recombination.
    Nat Immunol. 2004 May;5(5):481-7 PMID: 15077110
  19. ATM signaling facilitates repair of DNA double-strand breaks associated with heterochromatin.
    Mol Cell. 2008 Jul 25;31(2):167-77 PMID: 18657500
  20. Phosphorylation-dependent interactions of BLM and 53BP1 are required for their anti-recombinogenic roles during homologous recombination.
    Carcinogenesis. 2008 Jan;29(1):52-61 PMID: 17984114
  21. A mutated intron sequence codes for an antigenic peptide recognized by cytolytic T lymphocytes on a human melanoma.
    Proc Natl Acad Sci U S A. 1995 Aug 15;92(17):7976-80 PMID: 7644523
  22. Around the world of DNA damage INO80 days.
    Cell. 2004 Dec 17;119(6):733-5 PMID: 15607967
  23. Direct interaction between SET8 and proliferating cell nuclear antigen couples H4-K20 methylation with DNA replication.
    J Biol Chem. 2008 Apr 25;283(17):11073-7 PMID: 18319261
  24. 53BP1 is required for class switch recombination.
    J Cell Biol. 2004 May 24;165(4):459-64 PMID: 15159415
  25. The multidomain protein Brpf1 binds histones and is required for Hox gene expression and segmental identity.
    Development. 2008 Jun;135(11):1935-46 PMID: 18469222
  26. Chromatin relaxation in response to DNA double-strand breaks is modulated by a novel ATM- and KAP-1 dependent pathway.
    Nat Cell Biol. 2006 Aug;8(8):870-6 PMID: 16862143
  27. A DNA damage-regulated BRCT-containing protein, TopBP1, is required for cell survival.
    Mol Cell Biol. 2002 Jan;22(2):555-66 PMID: 11756551
  28. HP1-beta mobilization promotes chromatin changes that initiate the DNA damage response.
    Nature. 2008 May 29;453(7195):682-6 PMID: 18438399
  29. RSC functions as an early double-strand-break sensor in the cell's response to DNA damage.
    Curr Biol. 2007 Aug 21;17(16):1432-7 PMID: 17689960
  30. Tying the loose ends together in DNA double strand break repair with 53BP1.
    Cell Div. 2006 Aug 31;1:19 PMID: 16945145
  31. Global chromatin compaction limits the strength of the DNA damage response.
    J Cell Biol. 2007 Sep 24;178(7):1101-8 PMID: 17893239
  32. The tandem BRCT domain of 53BP1 is not required for its repair function.
    J Biol Chem. 2006 Dec 15;281(50):38472-7 PMID: 17043355
  33. High resolution structure of the HDGF PWWP domain: a potential DNA binding domain.
    Protein Sci. 2006 Feb;15(2):314-23 PMID: 16384999
  34. 53BP1 facilitates long-range DNA end-joining during V(D)J recombination.
    Nature. 2008 Nov 27;456(7221):529-33 PMID: 18931658
  35. Regulation of Set9-mediated H4K20 methylation by a PWWP domain protein.
    Mol Cell. 2009 Feb 27;33(4):428-37 PMID: 19250904
  36. Reciprocal binding of PARP-1 and histone H1 at promoters specifies transcriptional outcomes.
    Science. 2008 Feb 8;319(5864):819-21 PMID: 18258916
  37. BRCT repeats as phosphopeptide-binding modules involved in protein targeting.
    Science. 2003 Oct 24;302(5645):636-9 PMID: 14576432
Article Info
Journal
Molecular cell
Abbr.
Mol Cell
ISSN
1097-4164
Published
2010-03-26
Pages
854-64
Language
English
Region
United States
NLM ID
9802571
PMCID
PMC3695488
Subset
IM
Grants
NCI NIH HHS · R01 CA089239-09 · United States
NCI NIH HHS · R01 CA092312 · United States
NCI NIH HHS · R01 CA100109 · United States
NCI NIH HHS · R01 CA100109-07 · United States
NCI NIH HHS · R01 CA089239-11 · United States
NCI NIH HHS · CA092312 · United States
NCI NIH HHS · P50 CA116201 · United States
NCI NIH HHS · CA100109 · United States
NCI NIH HHS · R01 CA092312-09 · United States
NCI NIH HHS · CA089239 · United States
NCI NIH HHS · R01 CA089239 · United States
NCI NIH HHS · R01 CA100109-08 · United States
NCI NIH HHS · R01 CA092312-11 · United States
NCI NIH HHS · R01 CA100109-09 · United States
NCI NIH HHS · R01 CA092312-10 · United States
NCI NIH HHS · R01 CA089239-10 · United States
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com