-
A key role for autophagy and the autophagy gene Atg16l1 in mouse and human intestinal Paneth cells.
Nature. 2008 Nov 13;456(7219):259-63
PMID: 18849966
-
Impairment of starvation-induced and constitutive autophagy in Atg7-deficient mice.
J Cell Biol. 2005 May 9;169(3):425-34
PMID: 15866887
-
A pharmacological map of the PI3-K family defines a role for p110alpha in insulin signaling.
Cell. 2006 May 19;125(4):733-47
PMID: 16647110
-
Autophagic cell death: the story of a misnomer.
Nat Rev Mol Cell Biol. 2008 Dec;9(12):1004-10
PMID: 18971948
-
Inhibition of mTOR induces autophagy and reduces toxicity of polyglutamine expansions in fly and mouse models of Huntington disease.
Nat Genet. 2004 Jun;36(6):585-95
PMID: 15146184
-
The itinerary of autophagosomes: from peripheral formation to kiss-and-run fusion with lysosomes.
Traffic. 2008 Apr;9(4):574-87
PMID: 18182013
-
In search of an "autophagomometer".
Autophagy. 2009 Jul;5(5):585-9
PMID: 19411822
-
The phosphatidylinositol 3-kinase inhibitors wortmannin and LY294002 inhibit autophagy in isolated rat hepatocytes.
Eur J Biochem. 1997 Jan 15;243(1-2):240-6
PMID: 9030745
-
Dynein-dependent movement of autophagosomes mediates efficient encounters with lysosomes.
Cell Struct Funct. 2008;33(1):109-22
PMID: 18388399
-
Loss of the autophagy protein Atg16L1 enhances endotoxin-induced IL-1beta production.
Nature. 2008 Nov 13;456(7219):264-8
PMID: 18849965
-
The role of autophagy in mammalian development: cell makeover rather than cell death.
Dev Cell. 2008 Sep;15(3):344-357
PMID: 18804433
-
Ambra1 regulates autophagy and development of the nervous system.
Nature. 2007 Jun 28;447(7148):1121-5
PMID: 17589504
-
Regulation mechanisms and signaling pathways of autophagy.
Annu Rev Genet. 2009;43:67-93
PMID: 19653858
-
Induction of autophagy in axonal dystrophy and degeneration.
J Neurosci. 2006 Aug 2;26(31):8057-68
PMID: 16885219
-
Autophagy, immunity, and microbial adaptations.
Cell Host Microbe. 2009 Jun 18;5(6):527-49
PMID: 19527881
-
Autophagy genes are essential for dauer development and life-span extension in C. elegans.
Science. 2003 Sep 5;301(5638):1387-91
PMID: 12958363
-
Essential roles of Atg5 and FADD in autophagic cell death: dissection of autophagic cell death into vacuole formation and cell death.
J Biol Chem. 2005 May 27;280(21):20722-9
PMID: 15778222
-
The dynamics of autophagy visualized in live cells: from autophagosome formation to fusion with endo/lysosomes.
Autophagy. 2005 Apr;1(1):23-36
PMID: 16874023
-
The role of autophagy during the early neonatal starvation period.
Nature. 2004 Dec 23;432(7020):1032-6
PMID: 15525940
-
Promotion of tumorigenesis by heterozygous disruption of the beclin 1 autophagy gene.
J Clin Invest. 2003 Dec;112(12):1809-20
PMID: 14638851
-
Functional specificity of the mammalian Beclin-Vps34 PI 3-kinase complex in macroautophagy versus endocytosis and lysosomal enzyme trafficking.
J Cell Sci. 2006 Jan 15;119(Pt 2):259-70
PMID: 16390869
-
Distinct roles of autophagy in the heart during ischemia and reperfusion: roles of AMP-activated protein kinase and Beclin 1 in mediating autophagy.
Circ Res. 2007 Mar 30;100(6):914-22
PMID: 17332429
-
Autophagy in the pathogenesis of disease.
Cell. 2008 Jan 11;132(1):27-42
PMID: 18191218
-
Vesicular trafficking and autophagosome formation.
Cell Death Differ. 2009 Jul;16(7):956-65
PMID: 19373247
-
Intracellular inclusions containing mutant alpha1-antitrypsin Z are propagated in the absence of autophagic activity.
J Biol Chem. 2006 Feb 17;281(7):4467-76
PMID: 16365039
-
Ulk1 plays a critical role in the autophagic clearance of mitochondria and ribosomes during reticulocyte maturation.
Blood. 2008 Aug 15;112(4):1493-502
PMID: 18539900
-
Homeostatic levels of p62 control cytoplasmic inclusion body formation in autophagy-deficient mice.
Cell. 2007 Dec 14;131(6):1149-63
PMID: 18083104
-
Developmental expression of LC3alpha and beta: absence of fibronectin or autophagy phenotype in LC3beta knockout mice.
Dev Dyn. 2008 Jan;237(1):187-95
PMID: 18069693
-
The roles of intracellular protein-degradation pathways in neurodegeneration.
Nature. 2006 Oct 19;443(7113):780-6
PMID: 17051204
-
Atg9a controls dsDNA-driven dynamic translocation of STING and the innate immune response.
Proc Natl Acad Sci U S A. 2009 Dec 8;106(49):20842-6
PMID: 19926846
-
Active-site inhibitors of mTOR target rapamycin-resistant outputs of mTORC1 and mTORC2.
PLoS Biol. 2009 Feb 10;7(2):e38
PMID: 19209957
-
Aberrant membranes and double-membrane structures accumulate in the axons of Atg5-null Purkinje cells before neuronal death.
Autophagy. 2007 Nov-Dec;3(6):591-6
PMID: 17912025
-
Direct inhibition of the signaling functions of the mammalian target of rapamycin by the phosphoinositide 3-kinase inhibitors, wortmannin and LY294002.
EMBO J. 1996 Oct 1;15(19):5256-67
PMID: 8895571
-
To be or not to be? Examples of incorrect identification of autophagic compartments in conventional transmission electron microscopy of mammalian cells.
Autophagy. 2008 Feb;4(2):257-60
PMID: 17986849
-
Functional and physical interaction between Bcl-X(L) and a BH3-like domain in Beclin-1.
EMBO J. 2007 May 16;26(10):2527-39
PMID: 17446862
-
LC3, an autophagosome marker, can be incorporated into protein aggregates independent of autophagy: caution in the interpretation of LC3 localization.
Autophagy. 2007 Jul-Aug;3(4):323-8
PMID: 17387262
-
Does bafilomycin A1 block the fusion of autophagosomes with lysosomes?
Autophagy. 2008 Oct;4(7):849-50
PMID: 18758232
-
3-Methyladenine, an inhibitor of autophagy, has multiple effects on metabolism.
Eur J Biochem. 1988 Aug 1;175(2):325-9
PMID: 3402459
-
Role of FIP200 in cardiac and liver development and its regulation of TNFalpha and TSC-mTOR signaling pathways.
J Cell Biol. 2006 Oct 9;175(1):121-33
PMID: 17015619
-
Novel targets for Huntington's disease in an mTOR-independent autophagy pathway.
Nat Chem Biol. 2008 May;4(5):295-305
PMID: 18391949
-
Autophagy fights disease through cellular self-digestion.
Nature. 2008 Feb 28;451(7182):1069-75
PMID: 18305538
-
The Atg8 conjugation system is indispensable for proper development of autophagic isolation membranes in mice.
Mol Biol Cell. 2008 Nov;19(11):4762-75
PMID: 18768753
-
Guidelines for the use and interpretation of assays for monitoring autophagy in higher eukaryotes.
Autophagy. 2008 Feb;4(2):151-75
PMID: 18188003
-
Generation of cell lines with tetracycline-regulated autophagy and a role for autophagy in controlling cell size.
FEBS Lett. 2006 May 15;580(11):2623-9
PMID: 16647067
-
A rational mechanism for combination treatment of Huntington's disease using lithium and rapamycin.
Hum Mol Genet. 2008 Jan 15;17(2):170-8
PMID: 17921520
-
Transcriptional activation of p62/A170/ZIP during the formation of the aggregates: possible mechanisms and the role in Lewy body formation in Parkinson's disease.
Brain Res. 2004 Jun 25;1012(1-2):42-51
PMID: 15158159
-
Tissue-specific autophagy alterations and increased tumorigenesis in mice deficient in Atg4C/autophagin-3.
J Biol Chem. 2007 Jun 22;282(25):18573-18583
PMID: 17442669
-
Cardiac autophagy is a maladaptive response to hemodynamic stress.
J Clin Invest. 2007 Jul;117(7):1782-93
PMID: 17607355
-
GFP-like proteins stably accumulate in lysosomes.
Cell Struct Funct. 2008;33(1):1-12
PMID: 18256512
-
siRNA screening of the kinome identifies ULK1 as a multidomain modulator of autophagy.
J Biol Chem. 2007 Aug 31;282(35):25464-74
PMID: 17595159
-
3-Methyladenine inhibits transport from late endosomes to lysosomes in cultured rat and mouse fibroblasts.
Eur J Cell Biol. 1994 Oct;65(1):14-25
PMID: 7889984
-
Assaying autophagic activity in transgenic GFP-Lc3 and GFP-Gabarap zebrafish embryos.
Autophagy. 2009 May;5(4):520-6
PMID: 19221467
-
Dissection of the autophagosome maturation process by a novel reporter protein, tandem fluorescent-tagged LC3.
Autophagy. 2007 Sep-Oct;3(5):452-60
PMID: 17534139
-
Small molecule regulators of autophagy identified by an image-based high-throughput screen.
Proc Natl Acad Sci U S A. 2007 Nov 27;104(48):19023-8
PMID: 18024584
-
Methods for monitoring autophagy.
Int J Biochem Cell Biol. 2004 Dec;36(12):2491-502
PMID: 15325587
-
p62/SQSTM1 forms protein aggregates degraded by autophagy and has a protective effect on huntingtin-induced cell death.
J Cell Biol. 2005 Nov 21;171(4):603-14
PMID: 16286508
-
How to interpret LC3 immunoblotting.
Autophagy. 2007 Nov-Dec;3(6):542-5
PMID: 17611390
-
Small molecules enhance autophagy and reduce toxicity in Huntington's disease models.
Nat Chem Biol. 2007 Jun;3(6):331-8
PMID: 17486044
-
FIP200, a ULK-interacting protein, is required for autophagosome formation in mammalian cells.
J Cell Biol. 2008 May 5;181(3):497-510
PMID: 18443221
-
Inhibition of mitochondrial permeability transition and release of cytochrome c by anti-apoptotic nucleoside analogues.
Biochem Pharmacol. 2002 Aug 1;64(3):441-9
PMID: 12147295
-
An Atg4B mutant hampers the lipidation of LC3 paralogues and causes defects in autophagosome closure.
Mol Biol Cell. 2008 Nov;19(11):4651-9
PMID: 18768752
-
In vivo analysis of autophagy in response to nutrient starvation using transgenic mice expressing a fluorescent autophagosome marker.
Mol Biol Cell. 2004 Mar;15(3):1101-11
PMID: 14699058
-
Beclin 1, an autophagy gene essential for early embryonic development, is a haploinsufficient tumor suppressor.
Proc Natl Acad Sci U S A. 2003 Dec 9;100(25):15077-82
PMID: 14657337
-
A method to measure cardiac autophagic flux in vivo.
Autophagy. 2008 Apr;4(3):322-9
PMID: 18216495
-
Utilizing flow cytometry to monitor autophagy in living mammalian cells.
Autophagy. 2008 Jul;4(5):621-8
PMID: 18376137
-
Trehalose, a novel mTOR-independent autophagy enhancer, accelerates the clearance of mutant huntingtin and alpha-synuclein.
J Biol Chem. 2007 Feb 23;282(8):5641-52
PMID: 17182613
-
Beclin 1 forms two distinct phosphatidylinositol 3-kinase complexes with mammalian Atg14 and UVRAG.
Mol Biol Cell. 2008 Dec;19(12):5360-72
PMID: 18843052
-
Role and regulation of starvation-induced autophagy in the Drosophila fat body.
Dev Cell. 2004 Aug;7(2):167-78
PMID: 15296714
-
Potential therapeutic applications of autophagy.
Nat Rev Drug Discov. 2007 Apr;6(4):304-12
PMID: 17396135
-
Programmed autophagy in the Drosophila fat body is induced by ecdysone through regulation of the PI3K pathway.
Dev Cell. 2004 Aug;7(2):179-92
PMID: 15296715
-
Kinase-inactivated ULK proteins inhibit autophagy via their conserved C-terminal domains using an Atg13-independent mechanism.
Mol Cell Biol. 2009 Jan;29(1):157-71
PMID: 18936157
-
Processing of ATG8s, ubiquitin-like proteins, and their deconjugation by ATG4s are essential for plant autophagy.
Plant Cell. 2004 Nov;16(11):2967-83
PMID: 15494556
-
The pre-autophagosomal structure organized by concerted functions of APG genes is essential for autophagosome formation.
EMBO J. 2001 Nov 1;20(21):5971-81
PMID: 11689437
-
The Atg16L complex specifies the site of LC3 lipidation for membrane biogenesis in autophagy.
Mol Biol Cell. 2008 May;19(5):2092-100
PMID: 18321988
-
Consideration about negative controls for LC3 and expression vectors for four colored fluorescent protein-LC3 negative controls.
Autophagy. 2008 Jan;4(1):131-4
PMID: 18000393
-
LC3, a mammalian homologue of yeast Apg8p, is localized in autophagosome membranes after processing.
EMBO J. 2000 Nov 1;19(21):5720-8
PMID: 11060023
-
A picky eater: exploring the mechanisms of selective autophagy in human pathologies.
Traffic. 2008 Mar;9(3):281-9
PMID: 17988219
-
Two Beclin 1-binding proteins, Atg14L and Rubicon, reciprocally regulate autophagy at different stages.
Nat Cell Biol. 2009 Apr;11(4):385-96
PMID: 19270696
-
Bafilomycin A1 prevents maturation of autophagic vacuoles by inhibiting fusion between autophagosomes and lysosomes in rat hepatoma cell line, H-4-II-E cells.
Cell Struct Funct. 1998 Feb;23(1):33-42
PMID: 9639028
-
Dissection of autophagosome formation using Apg5-deficient mouse embryonic stem cells.
J Cell Biol. 2001 Feb 19;152(4):657-68
PMID: 11266458
-
Lysosomal turnover, but not a cellular level, of endogenous LC3 is a marker for autophagy.
Autophagy. 2005 Jul;1(2):84-91
PMID: 16874052
-
Autophagy is an adaptive response in desmin-related cardiomyopathy.
Proc Natl Acad Sci U S A. 2008 Jul 15;105(28):9745-50
PMID: 18621691
-
An ATP-competitive mammalian target of rapamycin inhibitor reveals rapamycin-resistant functions of mTORC1.
J Biol Chem. 2009 Mar 20;284(12):8023-32
PMID: 19150980
-
Induction of macroautophagy by exogenously introduced calcium.
Autophagy. 2008 Aug;4(6):754-61
PMID: 18560273
-
Nutrient-dependent mTORC1 association with the ULK1-Atg13-FIP200 complex required for autophagy.
Mol Biol Cell. 2009 Apr;20(7):1981-91
PMID: 19211835
-
Autophagy genes in immunity.
Nat Immunol. 2009 May;10(5):461-70
PMID: 19381141