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PMID: 17027697 Published · ppublish English Journal Article Research Support, N.I.H., Extramural Review

Assessment of genome and proteome profiles in cocaine abuse.

Progress in brain research ·Vol. 158 ·2006-00-00 ·Pages 173-95

Hemby SE

Abstract

Until recently, knowledge of the impact of abuse drugs on gene and protein expression in the brain was limited to less than 100 targets. With the advent of high-throughput genomic and proteomic techniques investigators are now able to evaluate changes across the entire genome and across thousands of proteins in defined brain regions and generate expression profiles of vulnerable neuroanatomical substrates in rodent and non-human primate drug abuse models and in human post-mortem brain tissue from drug abuse victims. The availability of gene and protein expression profiles will continue to expand our understanding of the short- and long-term consequences of drug addiction and other addictive disorders and may provide new approaches or new targets for pharmacotherapeutic intervention. This chapter will review gene expression data from rodent, non-human primate and human post-mortem studies of cocaine abuse and will provide a preliminary proteomic profile of human cocaine abuse and explore how these studies have advanced our understanding of addiction.

MeSH Terms
Animals Behavior, Addictive/genetics Cocaine-Related Disorders/genetics Gene Expression Gene Expression Profiling Genomics Humans Proteomics
Authors & Affiliations
1 authors, click to expand affiliations / ORCID
Hemby Scott E
Department of Physiology and Pharmacology, Wake Forest University School of Medicine, Winston-Salem, NC 27157, USA. shemby@wfubmc.edu <shemby@wfubmc.edu>
References (83)
83 references, click to expand
  1. Cocaine use increases [3H]WIN 35428 binding sites in human striatum.
    Brain Res. 1993 Nov 19;628(1-2):17-25 PMID: 8313144
  2. Effects of chronic exposure to cocaine are regulated by the neuronal protein Cdk5.
    Nature. 2001 Mar 15;410(6826):376-80 PMID: 11268215
  3. Cocaine abuse elevates alpha-synuclein and dopamine transporter levels in the human striatum.
    Neuroreport. 2005 Sep 8;16(13):1489-93 PMID: 16110277
  4. Induction of a long-lasting AP-1 complex composed of altered Fos-like proteins in brain by chronic cocaine and other chronic treatments.
    Neuron. 1994 Nov;13(5):1235-44 PMID: 7946359
  5. Repeated cocaine administration alters the expression of genes in corticolimbic circuitry after a 3-week withdrawal: a DNA macroarray study.
    J Neurochem. 2002 Sep;82(5):1290-9 PMID: 12358776
  6. PCR differential display identifies a rat brain mRNA that is transcriptionally regulated by cocaine and amphetamine.
    J Neurosci. 1995 Mar;15(3 Pt 2):2471-81 PMID: 7891182
  7. Regulation of gene expression and cocaine reward by CREB and DeltaFosB.
    Nat Neurosci. 2003 Nov;6(11):1208-15 PMID: 14566342
  8. Discrete cell gene profiling of ventral tegmental dopamine neurons after acute and chronic cocaine self-administration.
    J Pharmacol Exp Ther. 2003 Nov;307(2):450-9 PMID: 12966149
  9. Proteomic analysis of phosphotyrosyl proteins in morphine-dependent rat brains.
    Brain Res Mol Brain Res. 2005 Jan 5;133(1):58-70 PMID: 15661365
  10. Single-cell molecular biology.
    Nat Neurosci. 2001 Nov;4 Suppl:1155-6 PMID: 11687821
  11. Development under the influence of cocaine. I. A comparison of the effects of daily cocaine treatment and resultant undernutrition on pregnancy and early growth in a large population of rats.
    Metab Brain Dis. 1990 Jun;5(2):85-99 PMID: 2385217
  12. Molecular basis of long-term plasticity underlying addiction.
    Nat Rev Neurosci. 2001 Feb;2(2):119-28 PMID: 11252991
  13. Amplified RNA synthesized from limited quantities of heterogeneous cDNA.
    Proc Natl Acad Sci U S A. 1990 Mar;87(5):1663-7 PMID: 1689846
  14. Distinct proteomic profiles of amphetamine self-administration transitional states.
    Pharmacogenomics J. 2005;5(3):203-14 PMID: 15852055
  15. A psychomotor stimulant theory of addiction.
    Psychol Rev. 1987 Oct;94(4):469-92 PMID: 3317472
  16. Relationship between subjective effects of cocaine and dopamine transporter occupancy.
    Nature. 1997 Apr 24;386(6627):827-30 PMID: 9126740
  17. Gelsolin for senescence-associated resistance to apoptosis.
    Ann N Y Acad Sci. 2003 Dec;1010:493-5 PMID: 15033777
  18. The role of neurotrophic factors in psychostimulant-induced behavioral and neuronal plasticity.
    Rev Neurosci. 2001;12(2):95-110 PMID: 11392459
  19. Identification of PSD-95 as a regulator of dopamine-mediated synaptic and behavioral plasticity.
    Neuron. 2004 Feb 19;41(4):625-38 PMID: 14980210
  20. Activation of arc, a putative "effector" immediate early gene, by cocaine in rat brain.
    J Neurochem. 1995 May;64(5):2377-80 PMID: 7722525
  21. Induction of nuclear factor-kappaB in nucleus accumbens by chronic cocaine administration.
    J Neurochem. 2001 Oct;79(1):221-4 PMID: 11595774
  22. Amygdala dopamine levels are markedly elevated after self- but not passive-administration of cocaine.
    Brain Res. 1994 Dec 30;668(1-2):39-45 PMID: 7704616
  23. Uneven pattern of dopamine loss in the striatum of patients with idiopathic Parkinson's disease. Pathophysiologic and clinical implications.
    N Engl J Med. 1988 Apr 7;318(14):876-80 PMID: 3352672
  24. Do rats have prefrontal cortex? The rose-woolsey-akert program reconsidered.
    J Cogn Neurosci. 1995 Winter;7(1):1-24 PMID: 23961750
  25. Neutralization of neutrophin-3 in the ventral tegmental area or nucleus accumbens differentially modulates cocaine-induced behavioral plasticity in rats.
    Synapse. 2002 Nov;46(2):57-65 PMID: 12211082
  26. Widespread origin of the primate mesofrontal dopamine system.
    Cereb Cortex. 1998 Jun;8(4):321-45 PMID: 9651129
  27. Recent advances in the biology of addiction.
    Curr Psychiatry Rep. 1999 Dec;1(2):159-65 PMID: 11122919
  28. Network-level changes in expression of inducible Fos-Jun proteins in the striatum during chronic cocaine treatment and withdrawal.
    Neuron. 1996 Jul;17(1):147-56 PMID: 8755486
  29. Gene expression related to synaptogenesis, neuritogenesis, and MAP kinase in behavioral sensitization to psychostimulants.
    Ann N Y Acad Sci. 2002 Jun;965:55-67 PMID: 12105085
  30. Repeated cocaine self-administration causes multiple changes in rat frontal cortex gene expression.
    Neurochem Res. 2002 Oct;27(10):1181-92 PMID: 12462416
  31. Functional consequences of acute cocaine treatment depend on route of administration.
    Psychopharmacology (Berl). 1993;112(2-3):343-51 PMID: 7871040
  32. Radiological and neurological changes in the drug abuse patient: a study with MRI.
    J Neuroradiol. 1988;15(3):288-93 PMID: 3266757
  33. Analysis of gene expression in single live neurons.
    Proc Natl Acad Sci U S A. 1992 Apr 1;89(7):3010-4 PMID: 1557406
  34. The activity-regulated cytoskeletal-associated protein arc is expressed in different striosome-matrix patterns following exposure to amphetamine and cocaine.
    J Neurochem. 2000 May;74(5):2074-8 PMID: 10800951
  35. c-Fos and deltaFosB expression are differentially altered in distinct subregions of the nucleus accumbens shell in cocaine-sensitized rats.
    Neuroscience. 2006 Feb;137(3):773-80 PMID: 16337088
  36. Effect of smoking history on [3H]nicotine binding in human postmortem brain.
    J Pharmacol Exp Ther. 1997 Jul;282(1):7-13 PMID: 9223534
  37. Reduced frontal white matter integrity in cocaine dependence: a controlled diffusion tensor imaging study.
    Biol Psychiatry. 2002 Jun 1;51(11):890-5 PMID: 12022962
  38. Cocaine-induced alterations in nucleus accumbens ionotropic glutamate receptor subunits in human and non-human primates.
    J Neurochem. 2005 Dec;95(6):1785-93 PMID: 16363995
  39. Glucose-dependent insulinotropic polypeptide is expressed in adult hippocampus and induces progenitor cell proliferation.
    J Neurosci. 2005 Feb 16;25(7):1816-25 PMID: 15716418
  40. Cocaine alters cerebral metabolism within the ventral striatum and limbic cortex of monkeys.
    J Neurosci. 1996 Feb 1;16(3):1230-8 PMID: 8558251
  41. Alterations in ionotropic glutamate receptor subunits during binge cocaine self-administration and withdrawal in rats.
    J Neurochem. 2004 May;89(4):1021-33 PMID: 15140200
  42. Long-lasting increase in the set point for cocaine self-administration after escalation in rats.
    Psychopharmacology (Berl). 1999 Oct;146(3):303-12 PMID: 10541731
  43. cDNA array reveals increased expression of glucose-dependent insulinotropic polypeptide following chronic clozapine treatment: role in atypical antipsychotic drug-induced adverse metabolic effects.
    Pharmacogenomics J. 2006 Mar-Apr;6(2):131-40 PMID: 16402076
  44. Neuronal gelsolin prevents apoptosis by enhancing actin depolymerization.
    Mol Cell Neurosci. 2004 Jan;25(1):69-82 PMID: 14962741
  45. Kappa2 opioid receptors in limbic areas of the human brain are upregulated by cocaine in fatal overdose victims.
    J Neurosci. 1997 Nov 1;17(21):8225-33 PMID: 9334398
  46. Dopamine and cyclic AMP-regulated phosphoprotein-32 phosphorylation pattern in cocaine and morphine-sensitized rats.
    J Neurochem. 2004 Aug;90(4):792-9 PMID: 15287884
  47. Gene expression evidence for remodeling of lateral hypothalamic circuitry in cocaine addiction.
    Proc Natl Acad Sci U S A. 2005 Aug 9;102(32):11533-8 PMID: 16076954
  48. The organization of midbrain projections to the ventral striatum in the primate.
    Neuroscience. 1994 Apr;59(3):609-23 PMID: 7516505
  49. Limbic activation during cue-induced cocaine craving.
    Am J Psychiatry. 1999 Jan;156(1):11-8 PMID: 9892292
  50. Differential regulation of ionotropic glutamate receptor subunits following cocaine self-administration.
    Brain Res. 2005 Dec 7;1064(1-2):75-82 PMID: 16277980
  51. Aging-associated increase of gelsolin for apoptosis resistance.
    Biochem Biophys Res Commun. 2003 Dec 26;312(4):1335-41 PMID: 14652020
  52. High affinity cocaine recognition sites on the dopamine transporter are elevated in fatal cocaine overdose victims.
    J Pharmacol Exp Ther. 1994 Dec;271(3):1678-85 PMID: 7996484
  53. Requirement of circadian genes for cocaine sensitization in Drosophila.
    Science. 1999 Aug 13;285(5430):1066-8 PMID: 10446052
  54. Chronic cocaine-mediated changes in non-human primate nucleus accumbens gene expression.
    J Neurochem. 2001 Apr;77(2):542-9 PMID: 11299316
  55. [125I]RTI-55 binding to cocaine-sensitive dopaminergic and serotonergic uptake sites in the human brain.
    J Neurochem. 1993 Dec;61(6):1996-2006 PMID: 8245956
  56. Molecular profiling of midbrain dopamine regions in cocaine overdose victims.
    J Neurochem. 2003 May;85(4):911-24 PMID: 12716423
  57. The effects of intravenous heroin administration on extracellular nucleus accumbens dopamine concentrations as determined by in vivo microdialysis.
    J Pharmacol Exp Ther. 1995 May;273(2):591-8 PMID: 7752060
  58. Regulation of ERK (extracellular signal regulated kinase), part of the neurotrophin signal transduction cascade, in the rat mesolimbic dopamine system by chronic exposure to morphine or cocaine.
    J Neurosci. 1996 Aug 1;16(15):4707-15 PMID: 8764658
  59. Single-cell gene expression analysis: implications for neurodegenerative and neuropsychiatric disorders.
    Neurochem Res. 2004 Jun;29(6):1053-64 PMID: 15176463
  60. DeltaFosB accumulates in a GABAergic cell population in the posterior tail of the ventral tegmental area after psychostimulant treatment.
    Eur J Neurosci. 2005 May;21(10):2817-24 PMID: 15926929
  61. Enhancement of locomotor activity and conditioned reward to cocaine by brain-derived neurotrophic factor.
    J Neurosci. 1999 May 15;19(10):4110-22 PMID: 10234039
  62. Differences in extracellular dopamine concentrations in the nucleus accumbens during response-dependent and response-independent cocaine administration in the rat.
    Psychopharmacology (Berl). 1997 Sep;133(1):7-16 PMID: 9335075
  63. Expression profile of transcripts in Alzheimer's disease tangle-bearing CA1 neurons.
    Ann Neurol. 2000 Jul;48(1):77-87 PMID: 10894219
  64. Gene expression profile of the nucleus accumbens of human cocaine abusers: evidence for dysregulation of myelin.
    J Neurochem. 2004 Mar;88(5):1211-9 PMID: 15009677
  65. Cocaine sensitization and reward are under the influence of circadian genes and rhythm.
    Proc Natl Acad Sci U S A. 2002 Jun 25;99(13):9026-30 PMID: 12084940
  66. Predominance of neuronal mRNAs in individual Alzheimer's disease senile plaques.
    Ann Neurol. 1999 Feb;45(2):174-81 PMID: 9989619
  67. DeltaFosB: a sustained molecular switch for addiction.
    Proc Natl Acad Sci U S A. 2001 Sep 25;98(20):11042-6 PMID: 11572966
  68. Molecular alterations in the neostriatum of human cocaine addicts.
    Synapse. 1993 Apr;13(4):357-69 PMID: 7683144
  69. Drugs abused by humans preferentially increase synaptic dopamine concentrations in the mesolimbic system of freely moving rats.
    Proc Natl Acad Sci U S A. 1988 Jul;85(14):5274-8 PMID: 2899326
  70. Neurobiological evidence for hedonic allostasis associated with escalating cocaine use.
    Nat Neurosci. 2002 Jul;5(7):625-6 PMID: 12055635
  71. Gene expression profile for schizophrenia: discrete neuron transcription patterns in the entorhinal cortex.
    Arch Gen Psychiatry. 2002 Jul;59(7):631-40 PMID: 12090816
  72. Clock genes outside the suprachiasmatic nucleus involved in manifestation of locomotor activity rhythm in rats.
    Eur J Neurosci. 2000 Dec;12(12):4206-14 PMID: 11122332
  73. Expanding insights of mitochondrial dysfunction in Parkinson's disease.
    Nat Rev Neurosci. 2006 Mar;7(3):207-19 PMID: 16495942
  74. Visualizing dopamine and serotonin transporters in the human brain with the potent cocaine analogue [125I]RTI-55: in vitro binding and autoradiographic characterization.
    J Neurochem. 1994 Feb;62(2):549-56 PMID: 8294917
  75. Chronic cocaine treatment decreases levels of the G protein subunits Gi alpha and Go alpha in discrete regions of rat brain.
    J Neurochem. 1990 Sep;55(3):1079-82 PMID: 2117048
  76. Repeated cocaine administration induces gene expression changes through the dopamine D1 receptors.
    Neuropsychopharmacology. 2005 Aug;30(8):1443-54 PMID: 15770241
  77. Transition from moderate to excessive drug intake: change in hedonic set point.
    Science. 1998 Oct 9;282(5387):298-300 PMID: 9765157
  78. Decreased presynaptic sensitivity to adenosine after cocaine withdrawal.
    J Neurosci. 1998 Oct 1;18(19):7996-8002 PMID: 9742166
  79. Differential gene expression in the rat caudate putamen after "binge" cocaine administration: advantage of triplicate microarray analysis.
    Synapse. 2003 Jun 15;48(4):157-69 PMID: 12687634
  80. Proteomics for protein expression profiling in neuroscience.
    Neurochem Res. 2004 Jun;29(6):1065-81 PMID: 15176464
  81. Characterization of the human cDNA and genomic DNA encoding CART: a cocaine- and amphetamine-regulated transcript.
    Gene. 1996 Mar 9;169(2):241-5 PMID: 8647455
  82. Cocaine-responsive gene expression changes in rat hippocampus.
    Neuroscience. 2001;108(3):371-80 PMID: 11738252
  83. Time-dependent changes in gene expression profiles of midbrain dopamine neurons following haloperidol administration.
    J Neurochem. 2003 Oct;87(1):205-19 PMID: 12969267
Article Info
Journal
Progress in brain research
Abbr.
Prog Brain Res
ISSN
0079-6123
Published
2006-00-00
Pages
173-95
Language
English
Region
Netherlands
NLM ID
0376441
PMCID
PMC4048548
Subset
IM
Grants
NIDA NIH HHS · R01 DA013234 · United States
NIDA NIH HHS · R01 DA013772 · United States
NIDA NIH HHS · DA013234 · United States
NIDA NIH HHS · DA013772 · United States
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