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Conversion of a fraction of the unique sequence to part of the inverted repeats in the S component of the herpes simplex virus type 1 genome.
J Gen Virol. 1986 Jun;67 ( Pt 6):1035-48
PMID: 3011969
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DNA H form requires a homopurine-homopyrimidine mirror repeat.
Nature. 1987 Dec 3-9;330(6147):495-7
PMID: 2825028
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Consecutive A X T pairs can adopt a left-handed DNA structure.
Proc Natl Acad Sci U S A. 1986 Aug;83(16):5884-8
PMID: 3016726
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The segment inversion site of herpes simplex virus type 1 adopts a novel DNA structure.
J Biol Chem. 1987 May 5;262(13):6407-16
PMID: 3032967
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Isomerization of herpes simplex virus 1 genome: identification of the cis-acting and recombination sites within the domain of the a sequence.
Cell. 1985 Jul;41(3):803-11
PMID: 2988789
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Isolation of novel herpes simplex virus type 1 derivatives with tandem duplications of DNA sequences encoding immediate-early mRNA-5 and an origin of replication.
J Virol. 1985 Feb;53(2):607-15
PMID: 2982038
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A noninverting genome of a viable herpes simplex virus 1: presence of head-to-tail linkages in packaged genomes and requirements for circularization after infection.
J Virol. 1985 Feb;53(2):587-95
PMID: 2982037
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Nucleotide sequence and structural features of a novel US-a junction present in a defective herpes simplex virus genome.
J Virol. 1985 Jul;55(1):140-6
PMID: 2989551
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The chemistry and biology of unusual DNA structures adopted by oligopurine.oligopyrimidine sequences.
FASEB J. 1988 Nov;2(14):2939-49
PMID: 3053307
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Slight changes in conditions influence the family of non-B-DNA conformations of the herpes simplex virus type 1 DR2 repeats.
J Biol Chem. 1989 May 15;264(14):8207-13
PMID: 2542269
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Characterization of DNA sequence-common and sequence-specific proteins binding to cis-acting sites for cleavage of the terminal a sequence of the herpes simplex virus 1 genome.
J Virol. 1989 Mar;63(3):1059-68
PMID: 2536820
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Stabilization of Z DNA in vivo by localized supercoiling.
Science. 1989 Oct 20;246(4928):358-63
PMID: 2678475
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Intramolecular DNA triplexes in supercoiled plasmids. II. Effect of base composition and noncentral interruptions on formation and stability.
J Biol Chem. 1989 Apr 5;264(10):5950-6
PMID: 2647731
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Recognition of (dG)n.(dC)n sequences by endonuclease G. Characterization of the calf thymus nuclease.
J Biol Chem. 1989 Feb 25;264(6):3301-10
PMID: 2914952
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Magnesium ion-dependent triple-helix structure formed by homopurine-homopyrimidine sequences in supercoiled plasmid DNA.
Proc Natl Acad Sci U S A. 1988 Jun;85(11):3781-5
PMID: 3375241
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An oligopurine sequence bias occurs in eukaryotic viruses.
Nucleic Acids Res. 1988 Feb 25;16(4):1517-28
PMID: 3347495
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Endonuclease G: a (dG)n X (dC)n-specific DNase from higher eukaryotes.
EMBO J. 1987 Feb;6(2):401-7
PMID: 3582364
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A pH-dependent structural transition in the homopurine-homopyrimidine tract in superhelical DNA.
J Biomol Struct Dyn. 1985 Oct;3(2):327-38
PMID: 3917024
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Hypervariable 'minisatellite' regions in human DNA.
Nature. 1985 Mar 7-13;314(6006):67-73
PMID: 3856104
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Poly(dG)-poly(dC) sequences, under torsional stress, induce an altered DNA conformation upon neighboring DNA sequences.
Cell. 1985 Nov;43(1):199-206
PMID: 4075394
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The crystal structure of d(G-G-G-G-C-C-C-C). A model for poly(dG).poly(dC).
J Mol Biol. 1985 Jun 5;183(3):385-96
PMID: 4020865
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Substrate specificity of HeLa endonuclease R. A G-specific mammalian endonuclease.
J Biol Chem. 1990 Jul 5;265(19):10842-50
PMID: 2358442
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Purification and characterization of HeLa endonuclease R. A G-specific mammalian endonuclease.
J Biol Chem. 1990 Jul 5;265(19):10836-41
PMID: 2358441
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Construction of a double-jointed herpes simplex viral DNA molecule: inverted repeats are required for segment inversion, and direct repeats promote deletions.
Virology. 1981 Aug;113(1):345-62
PMID: 6267787
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Structure and role of the herpes simplex virus DNA termini in inversion, circularization and generation of virion DNA.
Cell. 1982 Nov;31(1):89-97
PMID: 6297756
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Herpesvirus-dependent amplification and inversion of cell-associated viral thymidine kinase gene flanked by viral a sequences and linked to an origin of viral DNA replication.
Proc Natl Acad Sci U S A. 1982 Sep;79(18):5626-30
PMID: 6291055
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Effects of neighboring DNA homopolymers on the biochemical and physical properties of the Escherichia coli lactose promoter. I. Cloning and characterization studies.
J Biol Chem. 1982 Nov 10;257(21):12954-61
PMID: 6290487
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Characterization of a viable, noninverting herpes simplex virus 1 genome derived by insertion and deletion of sequences at the junction of components L and S.
Proc Natl Acad Sci U S A. 1983 May;80(9):2690-4
PMID: 6302700
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Identification of two herpes simplex virus type 1-induced proteins (21K and 22K) which interact specifically with the a sequence of herpes simplex virus DNA.
J Gen Virol. 1984 Sep;65 ( Pt 9):1467-75
PMID: 6088679
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Nucleotide sequences of the joint between the L and S segments of herpes simplex virus types 1 and 2.
J Gen Virol. 1981 Aug;55(Pt 2):315-31
PMID: 6270266
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Site-specific inversion sequence of the herpes simplex virus genome: domain and structural features.
Proc Natl Acad Sci U S A. 1981 Nov;78(11):7047-51
PMID: 6273905
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Molecular engineering of the herpes simplex virus genome: insertion of a second L-S junction into the genome causes additional genome inversions.
Cell. 1980 Nov;22(1 Pt 1):243-55
PMID: 6253078
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Dependence of DNA helix flexibility on base composition.
Nature. 1983 Aug 25-31;304(5928):752-4
PMID: 6888544
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Anatomy of herpes simplex virus DNA: evidence for four populations of molecules that differ in the relative orientations of their long and short components.
Proc Natl Acad Sci U S A. 1975 Nov;72(11):4243-7
PMID: 172900
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Intramolecular DNA triplexes in supercoiled plasmids.
Proc Natl Acad Sci U S A. 1988 Sep;85(17):6292-6
PMID: 3413097
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The DNA sequence of the human beta-globin region is strongly biased in favor of long strings of contiguous purine or pyrimidine residues.
Biochemistry. 1987 Dec 1;26(24):7870-5
PMID: 3427110
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Tetracycline promoter mutations decrease non-B DNA structural transitions, negative linking differences and deletions in recombinant plasmids in Escherichia coli.
J Mol Biol. 1989 Jun 5;207(3):513-26
PMID: 2547968
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Inversion events in the HSV-1 genome are directly mediated by the viral DNA replication machinery and lack sequence specificity.
Cell. 1988 Jul 29;54(3):369-81
PMID: 2840204
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Influence of DNA sequence on the formation of non-B right-handed helices in oligopurine.oligopyrimidine inserts in plasmids.
J Biol Chem. 1988 May 25;263(15):7386-96
PMID: 2835375
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Supercoiling of the DNA template during transcription.
Proc Natl Acad Sci U S A. 1987 Oct;84(20):7024-7
PMID: 2823250
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Recombinational hotspots within the herpes simplex virus DNA polymerase gene?
Nucleic Acids Res. 1987 Sep 25;15(18):7647-8
PMID: 2821512
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In vitro excision of adeno-associated virus DNA from recombinant plasmids: isolation of an enzyme fraction from HeLa cells that cleaves DNA at poly(G) sequences.
Mol Cell Biol. 1988 Jun;8(6):2513-22
PMID: 2841582
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Herpes simplex virus 1 recombinants with noninverting genomes frozen in different isomeric arrangements are capable of independent replication.
J Virol. 1986 Aug;59(2):494-9
PMID: 3016310