Abstract
We show that the metY locus which specifies tRNA(2fMet) in Escherichia coli K-12 specifies tRNA(1fMet) in E. coli B. This conclusion is based on results of Southern blot analysis of E. coli B and K-12 DNAs and on polymerase chain reaction amplification, cloning, and sequencing of an approximately 200-bp region of DNA corresponding to the metY loci of E. coli B and E. coli K-12. We also show that the metY locus of E. coli B is transcriptionally active. E. coli strains transformed with the multicopy plasmid vector pUC19 carrying the metY locus of E. coli B overproduce tRNA(1fMet) in E. coli B and E. coli K-12 in contrast to strains transformed with pUC19 carrying the corresponding locus from E. coli K-12, which overproduce tRNA(2fMet).
MeSH Terms
Base Sequence
Blotting, Southern
Cloning, Molecular
Escherichia coli/chemistry,genetics
Molecular Sequence Data
N-Formylmethionine/metabolism
Nucleic Acid Conformation
Polymerase Chain Reaction
RNA, Transfer, Met/analysis,genetics
Transcription, Genetic
Chemicals
RNA, Transfer, Met
N-Formylmethionine
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Mandal N
Department of Biology, Massachusetts Institute of Technology, Cambridge 02139.
RajBhandary U L
References (25)
25 references, click to expand
-
The molecular mechanism of thermal unfolding of Escherichia coli formylmethionine transfer RNA.
J Mol Biol. 1974 Jul 25;87(1):63-88
PMID: 4610153
-
Separation and comparison of primary structures of three formylmethionine tRNAs from E. coli K-12 MO.
Biochem Biophys Res Commun. 1973 Nov 16;55(2):320-7
PMID: 4358398
-
Sequence of the initiation factor IF2 gene: unusual protein features and homologies with elongation factors.
Proc Natl Acad Sci U S A. 1984 Dec;81(24):7787-91
PMID: 6096856
-
Comparison of initiation of protein synthesis in procaryotes, eucaryotes, and organelles.
Microbiol Rev. 1983 Mar;47(1):1-45
PMID: 6343825
-
tRNAMetf2 gene in the leader region of the nusA operon in Escherichia coli.
Proc Natl Acad Sci U S A. 1984 Jan;81(2):409-13
PMID: 6364142
-
Formylmethionyl-tRNA alters RNA polymerase specificity.
Proc Natl Acad Sci U S A. 1980 Feb;77(2):870-4
PMID: 6987670
-
In vitro expression of the Escherichia coli nusA-infB operon.
J Biol Chem. 1987 Jan 5;262(1):152-7
PMID: 3025199
-
Changes in tertiary structure accompanying a single base change in transfer RNA. Proton magnetic resonance and aminoacylation studies of Escherichia coli tRNAMet f1 and tRNAMet f3 and their spin-labeled (s4U8) derivatives.
Biochemistry. 1976 Sep 7;15(18):3917-24
PMID: 183808
-
DNA sequencing with chain-terminating inhibitors.
Proc Natl Acad Sci U S A. 1977 Dec;74(12):5463-7
PMID: 271968
-
Specific binding of formylated initiator-tRNA to Escherichia coli RNA polymerase.
Proc Natl Acad Sci U S A. 1976 Sep;73(9):3064-7
PMID: 787983
-
Detection of specific sequences among DNA fragments separated by gel electrophoresis.
J Mol Biol. 1975 Nov 5;98(3):503-17
PMID: 1195397
-
Construction and characterization of an Escherichia coli mutant deficient in the metY gene encoding tRNA(f2Met): either tRNA(f1Met) or tRNA(f2Met) is required for cell growth.
Gene. 1992 May 1;114(1):109-14
PMID: 1375181
-
Striking effects of coupling mutations in the acceptor stem on recognition of tRNAs by Escherichia coli Met-tRNA synthetase and Met-tRNA transformylase.
Proc Natl Acad Sci U S A. 1992 Oct 1;89(19):9262-6
PMID: 1409632
-
Construction and characterization of an Escherichia coli mutant with a deletion of the metZ gene encoding tRNA (f1Met).
Gene. 1991 Jul 15;103(1):31-6
PMID: 1715303
-
Direct analysis of aminoacylation levels of tRNAs in vivo. Application to studying recognition of Escherichia coli initiator tRNA mutants by glutaminyl-tRNA synthetase.
J Biol Chem. 1991 Dec 25;266(36):24712-8
PMID: 1761566
-
Mutants of Escherichia coli initiator tRNA that suppress amber codons in Saccharomyces cerevisiae and are aminoacylated with tyrosine by yeast extracts.
Proc Natl Acad Sci U S A. 1991 Dec 15;88(24):11378-82
PMID: 1763051
-
Genomic organization and physical mapping of the transfer RNA genes in Escherichia coli K12.
J Mol Biol. 1990 Apr 20;212(4):579-98
PMID: 2184240
-
Expression and function of a human initiator tRNA gene in the yeast Saccharomyces cerevisiae.
Mol Cell Biol. 1990 Sep;10(9):4486-94
PMID: 2201892
-
A functional analysis of the repeated methionine initiator tRNA genes (IMT) in yeast.
Mol Gen Genet. 1989 Apr;216(2-3):276-86
PMID: 2664453
-
Differential transcriptional control of the two tRNA(fMet) genes of Escherichia coli K-12.
Gene. 1988 Jul 15;67(1):49-57
PMID: 2843439
-
Effect of NusA protein on expression of the nusA,infB operon in E. coli.
Nucleic Acids Res. 1985 May 10;13(9):3371-88
PMID: 2987884
-
In vivo evidence that the nusA and infB genes of E. coli are part of the same multi-gene operon which encodes at least four proteins.
EMBO J. 1985 Feb;4(2):527-32
PMID: 2990900
-
Promoter selectivity of Escherichia coli RNA polymerase: alteration by fMet-tRNAfMet.
Nucleic Acids Res. 1986 Sep 11;14(17):6857-70
PMID: 3532031
-
Escherichia coli formylmethionine tRNA: mutations in GGGCCC sequence conserved in anticodon stem of initiator tRNAs affect initiation of protein synthesis and conformation of anticodon loop.
Proc Natl Acad Sci U S A. 1987 Jan;84(2):334-8
PMID: 3540960
-
The nucleotide sequence of N-formyl-methionyl-transfer RNA. Partial digestion with pancreatic and T-1 ribonuclease and derivation of the total primary structure.
Eur J Biochem. 1969 Mar;8(2):256-62
PMID: 4889178