Home LiteratureArticle Details
PMID: 1334894 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

Analysis of subtelomeric heterochromatin in the Drosophila minichromosome Dp1187 by single P element insertional mutagenesis.

Genetics ·Vol. 132 ·No. 3 ·1992-11-00 ·Pages 737-53

Karpen GH, Spradling AC

Abstract

We investigated whether single P element insertional mutagenesis could be used to analyze heterochromatin within the Drosophila minichromosome Dp1187. Forty-five insertions of the P[lacZ,rosy+] element onto Dp1187 (recovered among 7,825 transpositions) were highly clustered. None was recovered in centromeric heterochromatin, but 39 occurred about 40 kb from the distal telomere within a 4.7-kb hotspot containing tandem copies of a novel 1.8-kb repetitive DNA sequence. The DNA within and distal to this region lacked essential genes and displayed several other properties characteristic of heterochromatin. The rosy+ genes within the inserted transposons were inhibited by position-effect variegation, and the subtelomeric region was underrepresented in polytene salivary gland cells. These experiments demonstrated that P elements preferentially transpose into a small subset of heterochromatic sites, providing a versatile method for studying the structure and function of these chromosome regions. This approach revealed that a Drosophila chromosome contains a large region of subtelomeric heterochromatin with specific structural and genetic properties.

Related Genes
Sb ry
MeSH Terms
Animals Base Sequence Chromosomes/ultrastructure DNA Transposable Elements Drosophila/genetics Female Gene Expression Heterochromatin Male Molecular Sequence Data Mutagenesis, Insertional
Chemicals
DNA Transposable Elements Heterochromatin
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Karpen G H
Howard Hughes Medical Institute Research Laboratories, Carnegie Institution of Washington, Department of Embryology, Baltimore, Maryland 21210.
Spradling A C
References (38)
38 references, click to expand
  1. Position-effect variegation after 60 years.
    Trends Genet. 1990 Dec;6(12):422-6 PMID: 2087785
  2. Pleiotropic effects associated with the deletion of heterochromatin surrounding rDNA on the X chromosome of Drosophila.
    Chromosoma. 1982;86(4):469-90 PMID: 6816533
  3. Isolation of a telomeric DNA sequence from Drosophila melanogaster.
    Cold Spring Harb Symp Quant Biol. 1978;42 Pt 2:1041-6 PMID: 98261
  4. The maternally inherited regulation of P elements in Drosophila melanogaster can be elicited by two P copies at cytological site 1A on the X chromosome.
    Genetics. 1991 Oct;129(2):501-12 PMID: 1660427
  5. Analysis of a circular derivative of Saccharomyces cerevisiae chromosome III: a physical map and identification and location of ARS elements.
    Genetics. 1991 Oct;129(2):343-57 PMID: 1683846
  6. Sixty years of mystery.
    Genetics. 1990 Dec;126(4):779-84 PMID: 2127578
  7. Cytotype control of Drosophila P element transposition: the 66 kd protein is a repressor of transposase activity.
    Cell. 1990 Jul 27;62(2):269-84 PMID: 2164887
  8. Structure and variability of human chromosome ends.
    Mol Cell Biol. 1990 Feb;10(2):518-27 PMID: 2300052
  9. Molecular isolation and analysis of the erect wing locus in Drosophila melanogaster.
    Mol Cell Biol. 1989 Feb;9(2):719-25 PMID: 2496301
  10. The accumulation of P-elements on the tip of the X chromosome in populations of Drosophila melanogaster.
    Genet Res. 1989 Feb;53(1):1-6 PMID: 2497050
  11. Viable deletions of a telomere from a Drosophila chromosome.
    Cell. 1989 Aug 25;58(4):791-801 PMID: 2548737
  12. Modified P elements that mimic the P cytotype in Drosophila melanogaster.
    Genetics. 1989 Dec;123(4):815-24 PMID: 2558959
  13. Studies of He-T DNA sequences in the pericentric regions of Drosophila chromosomes.
    Chromosoma. 1989 Jan;97(4):261-71 PMID: 2565198
  14. Heterochromatic regions in different Drosophila melanogaster stocks contain similar arrangements of moderate repeats with inserted copia-like elements (MDG1).
    Chromosoma. 1989 Aug;98(2):117-22 PMID: 2570681
  15. Structure and function of telomeres.
    Annu Rev Genet. 1989;23:579-604 PMID: 2694944
  16. Insertional mutagenesis of the Drosophila genome with single P elements.
    Science. 1988 Mar 4;239(4844):1121-8 PMID: 2830671
  17. P element insertions and rearrangements at the singed locus of Drosophila melanogaster.
    Genetics. 1988 May;119(1):75-83 PMID: 2840331
  18. Molecular analysis of an unstable P element insertion at the singed locus of Drosophila melanogaster: evidence for intracistronic transposition of a P element.
    Genetics. 1988 May;119(1):85-94 PMID: 2840332
  19. Progressive loss of DNA sequences from terminal chromosome deficiencies in Drosophila melanogaster.
    EMBO J. 1988 Apr;7(4):1081-6 PMID: 2841109
  20. Effects of genomic position on the expression of transduced copies of the white gene of Drosophila.
    Science. 1985 Aug 9;229(4713):558-61 PMID: 2992080
  21. Hypervariable telomeric sequences from the human sex chromosomes are pseudoautosomal.
    Nature. 1985 Oct 24-30;317(6039):687-92 PMID: 2997619
  22. The underlying bases of gene expression differences in stable transformants of the rosy locus in Drosophila melanogaster.
    Genetics. 1986 Jun;113(2):265-85 PMID: 3013723
  23. Restriction of P-element insertions at the Notch locus of Drosophila melanogaster.
    Mol Cell Biol. 1987 Apr;7(4):1545-8 PMID: 3037327
  24. Telomeric motifs are present in a highly repetitive element in the Plasmodium berghei genome.
    Mol Biochem Parasitol. 1987 Jun;24(2):193-202 PMID: 3041211
  25. Multiplicity of satellite DNA sequences in Drosophila melanogaster.
    Proc Natl Acad Sci U S A. 1986 Feb;83(3):696-700 PMID: 3080746
  26. Homologous recombination within subtelomeric repeat sequences generates chromosome size polymorphisms in P. falciparum.
    Cell. 1988 Jun 3;53(5):807-13 PMID: 3286016
  27. Distribution of telomere-associated sequences on natural chromosomes in Saccharomyces cerevisiae.
    Mol Cell Biol. 1988 May;8(5):2257-60 PMID: 3290654
  28. Regulation of DNA replication during Drosophila development.
    Annu Rev Genet. 1987;21:373-403 PMID: 3327470
  29. Identification of a specific telomere terminal transferase activity in Tetrahymena extracts.
    Cell. 1985 Dec;43(2 Pt 1):405-13 PMID: 3907856
  30. DNA sequence of a 3.8 kilobase pair region controlling Drosophila chorion gene amplification.
    Chromosoma. 1985;92(2):136-42 PMID: 3924529
  31. Origin of concatemeric T7 DNA.
    Nat New Biol. 1972 Oct 18;239(94):197-201 PMID: 4507727
  32. Structures of P transposable elements and their sites of insertion and excision in the Drosophila melanogaster genome.
    Cell. 1983 Aug;34(1):25-35 PMID: 6309410
  33. The effect of chromosomal position on the expression of the Drosophila xanthine dehydrogenase gene.
    Cell. 1983 Aug;34(1):47-57 PMID: 6309411
  34. Transformation of white locus DNA in drosophila: dosage compensation, zeste interaction, and position effects.
    Cell. 1984 Feb;36(2):469-81 PMID: 6319027
  35. Construction of artificial chromosomes in yeast.
    Nature. 1983 Sep 15-21;305(5931):189-93 PMID: 6350893
  36. Telomere regions in Drosophila share complex DNA sequences with pericentric heterochromatin.
    Cell. 1983 Aug;34(1):85-94 PMID: 6411353
  37. A comprehensive set of sequence analysis programs for the VAX.
    Nucleic Acids Res. 1984 Jan 11;12(1 Pt 1):387-95 PMID: 6546423
  38. HeT DNA: a family of mosaic repeated sequences specific for heterochromatin in Drosophila melanogaster.
    Proc Natl Acad Sci U S A. 1990 Oct;87(20):7998-8002 PMID: 2122452
Article Info
Journal
Genetics
Abbr.
Genetics
ISSN
0016-6731
Published
1992-11-00
Pages
737-53
Language
English
Region
United States
NLM ID
0374636
PMCID
PMC1205211
Subset
IM
Grants
Howard Hughes Medical Institute · United States
NIGMS NIH HHS · GM27875 · United States
Databases
GENBANK
L03284, X62185, X62186, X62187, X62188, X62189, X62190, X67048, X67049, Z14148
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: product@genelibs.com