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PMID: 12767980 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

Genome replication, virion secretion, and e antigen expression of naturally occurring hepatitis B virus core promoter mutants.

Journal of virology ·Vol. 77 ·No. 12 ·2003-06-00 ·Pages 6601-12

Parekh S, Zoulim F, Ahn SH, Tsai A, Li J, Kawai S, Khan N, Trépo C, Wands J, Tong S

Abstract

The core promoter mutants of hepatitis B virus (HBV) emerge as the dominant viral population at the late HBeAg and the anti-HBe stages of HBV infection, with the A1762T/G1764A substitutions as the hotspot mutations. The double core promoter mutations were found by many investigators to moderately enhance viral genome replication and reduce hepatitis B e antigen (HBeAg) expression. A much higher replication capacity was reported for a naturally occurring core promoter mutant implicated in the outbreak of fulminant hepatitis, which was caused by the neighboring C1766T/T1768A mutations instead. To systemically study the biological properties of naturally occurring core promoter mutants, we amplified full-length HBV genomes by PCR from sera of HBeAg(+) individuals infected with genotype A. All 12 HBV genomes derived from highly viremic sera (5 x 10(9) to 5.7 x 10(9) copies of viral genome/ml) harbored wild-type core promoter sequence, whereas 37 of 43 clones from low-viremia samples (0.2 x 10(7) to 4.6 x 10(7) copies/ml) were core promoter mutants. Of the 11 wild-type genomes and 14 core promoter mutants analyzed by transfection experiments in human hepatoma cell lines, 6 core promoter mutants but none of the wild-type genomes replicated at high levels. All had 1762/1764 mutations and an additional substitution at position 1753 (T to C), at position 1766 (C to T), or both. Moreover, these HBV clones varied greatly in their ability to secrete enveloped viral particles irrespective of the presence of core promoter mutations. High-replication clones with 1762/1764/1766 or 1753/1762/1764/1766 mutations expressed very low levels of HBeAg, whereas high-replication clones with 1753/1762/1764 triple mutations expressed high levels of HBeAg. Experiments with site-directed mutants revealed that both 1762/1764/1766 and 1753/1762/1764/1766 mutations conferred significantly higher viral replication and lower HBeAg expression than 1762/1764 mutations alone, whereas the 1753/1762/1764 triple mutant displayed only mild reduction in HBeAg expression similar to the 1762/1764 mutant. Thus, core promoter mutations other than those at positions 1762 and 1764 can have major impact on viral DNA replication and HBeAg expression.

MeSH Terms
Base Sequence Gene Expression Regulation, Viral Genome, Viral Hepatitis B/virology Hepatitis B Surface Antigens/metabolism Hepatitis B e Antigens/blood,metabolism Hepatitis B virus/genetics,physiology Humans Molecular Sequence Data Mutagenesis, Site-Directed Mutation Promoter Regions, Genetic Tumor Cells, Cultured Viral Core Proteins/genetics,metabolism Virion/metabolism Virus Replication
Chemicals
Hepatitis B Surface Antigens Hepatitis B e Antigens Viral Core Proteins
Authors & Affiliations
10 authors, click to expand affiliations / ORCID
Parekh Sameer
The Liver Research Center, Rhode Island Hospital, and Brown Medical School, Providence, Rhode Island 02903, USA.
Zoulim Fabien
Ahn Sang Hoon
Tsai Adrienne
Li Jisu
Kawai Shigenobu
Khan Nasser
Trépo Christian
Wands Jack
Tong Shuping
References (56)
56 references, click to expand
  1. No significant correlation exists between core promoter mutations, viral replication, and liver damage in chronic hepatitis B infection.
    Hepatology. 2000 Nov;32(5):1154-62 PMID: 11050069
  2. Identification and expression of glycine decarboxylase (p120) as a duck hepatitis B virus pre-S envelope-binding protein.
    J Biol Chem. 1999 Sep 24;274(39):27658-65 PMID: 10488106
  3. A dominant hepatitis B virus population defective in virus secretion because of several S-gene mutations from a patient with fulminant hepatitis.
    Hepatology. 2001 Aug;34(2):385-94 PMID: 11481624
  4. Replication of the wild type and a natural hepatitis B virus nucleocapsid promoter variant is differentially regulated by nuclear hormone receptors in cell culture.
    J Virol. 2001 Oct;75(19):8937-48 PMID: 11533157
  5. Critical roles of nuclear receptor response elements in replication of hepatitis B virus.
    J Virol. 2001 Dec;75(23):11354-64 PMID: 11689616
  6. Clinical significance of hepatitis B virus genotypes.
    Hepatology. 2002 May;35(5):1274-6 PMID: 11981779
  7. Influence of hepatitis B virus genotypes on the progression of chronic type B liver disease.
    Hepatology. 2003 Jan;37(1):19-26 PMID: 12500184
  8. Basal core promoter mutations of hepatitis B virus increase the risk of hepatocellular carcinoma in hepatitis B carriers.
    Gastroenterology. 2003 Feb;124(2):327-34 PMID: 12557138
  9. Replication of the genome of a hepatitis B--like virus by reverse transcription of an RNA intermediate.
    Cell. 1982 Jun;29(2):403-15 PMID: 6180831
  10. Expression of the precore region of an avian hepatitis B virus is not required for viral replication.
    J Virol. 1987 Oct;61(10):3322-5 PMID: 3041052
  11. The duck hepatitis B virus pre-C region encodes a signal sequence which is essential for synthesis and secretion of processed core proteins but not for virus formation.
    J Virol. 1987 Dec;61(12):3701-9 PMID: 3682059
  12. Is a function of the secreted hepatitis B e antigen to induce immunologic tolerance in utero?
    Proc Natl Acad Sci U S A. 1990 Sep;87(17):6599-603 PMID: 2395863
  13. In vitro replication competence of a cloned hepatitis B virus variant with a nonsense mutation in the distal pre-C region.
    Virology. 1991 Apr;181(2):733-7 PMID: 2014646
  14. A hepatitis B virus mutant associated with an epidemic of fulminant hepatitis.
    N Engl J Med. 1991 Jun 13;324(24):1705-9 PMID: 2034247
  15. Rapid screening for bacterial colonies harbouring tandem hepatitis B virus sequences by an oligonucleotide probe.
    J Virol Methods. 1991 Apr;32(1):109-14 PMID: 2066384
  16. The precore gene of the woodchuck hepatitis virus genome is not essential for viral replication in the natural host.
    J Virol. 1992 Sep;66(9):5682-4 PMID: 1501300
  17. Replication capacities of natural and artificial precore stop codon mutants of hepatitis B virus: relevance of pregenome encapsidation signal.
    Virology. 1992 Nov;191(1):237-45 PMID: 1413504
  18. Relevance of cysteine residues for biosynthesis and antigenicity of human hepatitis B virus e protein.
    J Virol. 1993 Mar;67(3):1315-21 PMID: 8437217
  19. The complete nucleotide sequence of a pre-core mutant of hepatitis B virus implicated in fulminant hepatitis and its biological characterization in chimpanzees.
    Virology. 1993 May;194(1):263-76 PMID: 8480422
  20. An intramolecular disulfide bridge between Cys-7 and Cys61 determines the structure of the secretory core gene product (e antigen) of hepatitis B virus.
    J Virol. 1993 Jul;67(7):4307-15 PMID: 8510224
  21. Hepatitis B virus genotype A rarely circulates as an HBe-minus mutant: possible contribution of a single nucleotide in the precore region.
    J Virol. 1993 Sep;67(9):5402-10 PMID: 8350403
  22. Enhanced replication of a hepatitis B virus mutant associated with an epidemic of fulminant hepatitis.
    J Virol. 1994 Mar;68(3):1651-9 PMID: 8107226
  23. Mutations in the pre-core region of hepatitis B virus serve to enhance the stability of the secondary structure of the pre-genome encapsidation signal.
    Proc Natl Acad Sci U S A. 1994 Apr 26;91(9):4077-81 PMID: 8171038
  24. Hepatitis B virus with mutations in the core promoter for an e antigen-negative phenotype in carriers with antibody to e antigen.
    J Virol. 1994 Dec;68(12):8102-10 PMID: 7966600
  25. Hepatitis B virus strains with mutations in the core promoter in patients with fulminant hepatitis.
    Ann Intern Med. 1995 Feb 15;122(4):241-8 PMID: 7825758
  26. A novel method for efficient amplification of whole hepatitis B virus genomes permits rapid functional analysis and reveals deletion mutants in immunosuppressed patients.
    J Virol. 1995 Sep;69(9):5437-44 PMID: 7636989
  27. T1762/A1764 variants of the basal core promoter of hepatitis B virus; serological and clinical correlations in Chinese patients.
    Liver. 1999 Oct;19(5):411-7 PMID: 10533799
  28. Mutations of the core promoter and response to interferon treatment in chronic replicative hepatitis B.
    Hepatology. 2000 Mar;31(3):716-25 PMID: 10706563
  29. Low-level secretion of human hepatitis B virus virions caused by two independent, naturally occurring mutations (P5T and L60V) in the capsid protein.
    J Virol. 2000 Oct;74(19):9099-105 PMID: 10982356
  30. Rapid detection of genotypes and mutations in the pre-core promoter and the pre-core region of hepatitis B virus genome: correlation with viral persistence and disease severity.
    J Hepatol. 2000 Sep;33(3):430-9 PMID: 11019999
  31. Emergence of precore TAG mutation during hepatitis B e seroconversion and its dependence on pregenomic base pairing between nucleotides 1858 of 1896.
    J Infect Dis. 1995 Nov;172(5):1343-7 PMID: 7594674
  32. Hepatitis B virus infection: precore mutants and its relation to viral genotypes and core mutations.
    Hepatology. 1995 Dec;22(6):1641-7 PMID: 7489968
  33. Hepatitis B virus nucleocapsid envelopment does not occur without genomic DNA synthesis.
    J Virol. 1996 Jul;70(7):4269-74 PMID: 8676448
  34. Hepatitis B virus genomes of patients with fulminant hepatitis do not share a specific mutation.
    Hepatology. 1996 Aug;24(2):300-6 PMID: 8690396
  35. Effects of a naturally occurring mutation in the hepatitis B virus basal core promoter on precore gene expression and viral replication.
    J Virol. 1996 Sep;70(9):5845-51 PMID: 8709203
  36. Relationship between viral DNA synthesis and virion envelopment in hepatitis B viruses.
    J Virol. 1996 Sep;70(9):6455-8 PMID: 8709281
  37. Mutations in the hepatitis B virus precore/core gene and core promoter in patients with severe recurrent disease following liver transplantation.
    Hepatology. 1996 Dec;24(6):1371-8 PMID: 8938164
  38. Two core promotor mutations identified in a hepatitis B virus strain associated with fulminant hepatitis result in enhanced viral replication.
    J Clin Invest. 1996 Nov 15;98(10):2268-76 PMID: 8941643
  39. Reduced precore transcription and enhanced core-pregenome transcription of hepatitis B virus DNA after replacement of the precore-core promoter with sequences associated with e antigen-seronegative persistent infections.
    Virology. 1996 Dec 15;226(2):269-80 PMID: 8955047
  40. Type, prevalence, and significance of core promoter/enhancer II mutations in hepatitis B viruses from immunosuppressed patients with severe liver disease.
    J Virol. 1996 Dec;70(12):8318-31 PMID: 8970951
  41. Promoters for synthesis of the pre-C and pregenomic mRNAs of human hepatitis B virus are genetically distinct and differentially regulated.
    J Virol. 1996 Dec;70(12):8719-26 PMID: 8970999
  42. A hepatitis B virus mutant with a new hepatocyte nuclear factor 1 binding site emerging in transplant-transmitted fulminant hepatitis B.
    Hepatology. 1997 Jun;25(6):1507-15 PMID: 9185776
  43. Hepatitis B virus X gene 1751 to 1764 mutations: implications for HBeAg status and disease.
    J Gen Virol. 1997 Jun;78 ( Pt 6):1469-78 PMID: 9191945
  44. Biologic properties of hepatitis B viral genomes with mutations in the precore promoter and precore open reading frame.
    Virology. 1997 Jul 7;233(2):374-81 PMID: 9217060
  45. A unique segment of the hepatitis B virus group A genotype identified in isolates from South Africa.
    J Gen Virol. 1997 Jul;78 ( Pt 7):1719-29 PMID: 9225049
  46. Naturally occurring mutations define a novel function of the hepatitis B virus core promoter in core protein expression.
    J Virol. 1998 Aug;72(8):6785-95 PMID: 9658127
  47. Mechanism of suppression of hepatitis B virus precore RNA transcription by a frequent double mutation.
    J Virol. 1999 Feb;73(2):1239-44 PMID: 9882327
  48. High prevalence of 1762(T) 1764(A) mutations in the basic core promoter of hepatitis B virus isolated from black Africans with hepatocellular carcinoma compared with asymptomatic carriers.
    Hepatology. 1999 Mar;29(3):946-53 PMID: 10051502
  49. Different hepatitis B virus genotypes are associated with different mutations in the core promoter and precore regions during hepatitis B e antigen seroconversion.
    Hepatology. 1999 Mar;29(3):976-84 PMID: 10051506
  50. Core promoter mutations and genotypes in relation to viral replication and liver damage in East Asian hepatitis B virus carriers.
    J Infect Dis. 1999 Apr;179(4):775-82 PMID: 10068571
  51. Detection of mutations in the enhancer 2/core promoter region of hepatitis B virus in patients with chronic hepatitis B virus infection: comparison with mutations in precore and core regions in relation to clinical status.
    J Med Virol. 1999 Apr;57(4):337-44 PMID: 10089043
  52. Mutations in the basic core promotor and the precore region of hepatitis B virus and their selection in children with fulminant and chronic hepatitis B.
    Hepatology. 1999 Apr;29(4):1252-8 PMID: 10094972
  53. Three cases of severe subfulminant hepatitis in heart-transplanted patients after nosocomial transmission of a mutant hepatitis B virus.
    Hepatology. 1999 Jun;29(6):1876-83 PMID: 10347133
  54. The mechanism of an immature secretion phenotype of a highly frequent naturally occurring missense mutation at codon 97 of human hepatitis B virus core antigen.
    J Virol. 1999 Jul;73(7):5731-40 PMID: 10364324
  55. Clinical implications of mutations C-to-T1653 and T-to-C/A/G1753 of hepatitis B virus genotype C genome in chronic liver disease.
    Arch Virol. 1999;144(7):1299-308 PMID: 10481738
  56. A case-control study for clinical and molecular biological differences between hepatitis B viruses of genotypes B and C. Japan HBV Genotype Research Group.
    Hepatology. 2001 Jan;33(1):218-23 PMID: 11124839
Article Info
Journal
Journal of virology
Abbr.
J Virol
ISSN
0022-538X
Published
2003-06-00
Pages
6601-12
Language
English
Region
United States
NLM ID
0113724
PMCID
PMC156182
Subset
IM
Grants
NCI NIH HHS · CA-35711 · United States
NCRR NIH HHS · P20RR15578 · United States
NIAAA NIH HHS · AA-20169 · United States
NCI NIH HHS · R01 CA035711 · United States
NCI NIH HHS · R37 CA035711 · United States
NIAAA NIH HHS · R03 AA020169 · United States
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