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PMID: 12524272 Published · ppublish English Journal Article Research Support, Non-U.S. Gov't

Near-critical phenomena in intracellular metabolite pools.

Biophysical journal ·Vol. 84 ·No. 1 ·2003-01-00 ·Pages 154-70

Elf J, Paulsson J, Berg OG, Ehrenberg M

Abstract

The supply and consumption of metabolites in living cells are catalyzed by enzymes. Here we consider two of the simplest schemes where one substrate is eliminated through Michaelis-Menten kinetics, and where two types of substrates are joined together by an enzyme. It is demonstrated how steady-state substrate concentrations can change ultrasensitively in response to changes in their supply rates and how this is coupled to slow relaxation back to steady state after a perturbation. In the one-substrate system, such near-critical behavior occurs when the supply rate approaches the maximal elimination rate, and in the two-substrate system it occurs when the rates of substrate supply are almost balanced. As systems that operate near criticality tend to display large random fluctuations, we also carried out a stochastic analysis using analytical approximations of master equations and compared the results with molecular-level Monte Carlo simulations. It was found that the significance of random fluctuations was directly coupled to the steady-state sensitivity and that the two substrates can fluctuate greatly because they are anticorrelated in such a way that the product formation rate displays only small variation. Basic relations are highlighted and biological implications are discussed.

MeSH Terms
Biochemical Phenomena Cell Physiological Phenomena Enzyme Activation Enzymes/chemistry,metabolism Homeostasis/physiology Kinetics Macromolecular Substances Models, Biological Models, Chemical Sensitivity and Specificity Stochastic Processes Substrate Specificity
Chemicals
Enzymes Macromolecular Substances
Authors & Affiliations
4 authors, click to expand affiliations / ORCID
Elf Johan
Department of Cell & Molecular Biology, Uppsala University, BMC, Sweden. johan.elf@icm.uu.se
Paulsson Johan
Berg Otto G
Ehrenberg Måns
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Article Info
Journal
Biophysical journal
Abbr.
Biophys J
ISSN
0006-3495
Published
2003-01-00
Pages
154-70
Language
English
Region
United States
NLM ID
0370626
PMCID
PMC1302600
Subset
IM
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