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PMID: 11516337 Published · ppublish English Journal Article Research Support, U.S. Gov't, Non-P.H.S.

Analysis of the myosins encoded in the recently completed Arabidopsis thaliana genome sequence.

Genome biology ·Vol. 2 ·No. 7 ·2001-00-00 ·Pages RESEARCH0024

Reddy AS, Day IS

Abstract

Three types of molecular motors play an important role in the organization, dynamics and transport processes associated with the cytoskeleton. The myosin family of molecular motors move cargo on actin filaments, whereas kinesin and dynein motors move cargo along microtubules. These motors have been highly characterized in non-plant systems and information is becoming available about plant motors. The actin cytoskeleton in plants has been shown to be involved in processes such as transportation, signaling, cell division, cytoplasmic streaming and morphogenesis. The role of myosin in these processes has been established in a few cases but many questions remain to be answered about the number, types and roles of myosins in plants. Using the motor domain of an Arabidopsis myosin we identified 17 myosin sequences in the Arabidopsis genome. Phylogenetic analysis of the Arabidopsis myosins with non-plant and plant myosins revealed that all the Arabidopsis myosins and other plant myosins fall into two groups - class VIII and class XI. These groups contain exclusively plant or algal myosins with no animal or fungal myosins. Exon/intron data suggest that the myosins are highly conserved and that some may be a result of gene duplication. Plant myosins are unlike myosins from any other organisms except algae. As a percentage of the total gene number, the number of myosins is small overall in Arabidopsis compared with the other sequenced eukaryotic genomes. There are, however, a large number of class XI myosins. The function of each myosin has yet to be determined.

Keywords
NASA Discipline Plant Biology Non-NASA Center
MeSH Terms
Arabidopsis/genetics Base Sequence Exons Genes, Plant/genetics Genome, Plant Introns Myosins/genetics Phylogeny
Chemicals
Myosins
Authors & Affiliations
2 authors, click to expand affiliations / ORCID
Reddy A S
Department of Biology and Program in Cell and Molecular Biology, Colorado State University, Fort Collins, CO 80523, USA. reddy@lamar.colostate.edu
Day I S
Investigators
1 investigators, click to expand
Reddy A S
CO St U, Ft Collins
References (58)
58 references, click to expand
  1. Identification and analysis of the myosin superfamily in Drosophila: a database approach.
    J Muscle Res Cell Motil. 2000;21(6):491-505 PMID: 11206129
  2. Microtubule organization and dynamics dependent on microtubule-associated proteins.
    Curr Opin Cell Biol. 1994 Feb;6(1):74-81 PMID: 8167029
  3. Unconventional myosins in cell movement, membrane traffic, and signal transduction.
    Science. 1998 Jan 23;279(5350):527-33 PMID: 9438839
  4. Myosins from plants.
    Cell Mol Life Sci. 1999 Oct 15;56(3-4):227-32 PMID: 11212350
  5. Effects of myosin ATPase inhibitor 2,3-butanedione 2-monoxime on distributions of myosins, F-actin, microtubules, and cortical endoplasmic reticulum in maize root apices.
    Plant Cell Physiol. 2000 May;41(5):571-82 PMID: 10929940
  6. A kinesin family tree.
    J Cell Sci. 2000 Nov;113 Pt 21:3681-2 PMID: 11034894
  7. Actin- and microtubule-dependent organelle motors: interrelationships between the two motility systems.
    Curr Opin Cell Biol. 1995 Feb;7(1):82-8 PMID: 7755993
  8. Identification and localization of three classes of myosins in pollen tubes of Lilium longiflorum and Nicotiana alata.
    J Cell Sci. 1995 Jul;108 ( Pt 7):2549-63 PMID: 7593296
  9. Pollen tube growth is coupled to the extracellular calcium ion flux and the intracellular calcium gradient: effect of BAPTA-type buffers and hypertonic media.
    Plant Cell. 1994 Dec;6(12):1815-28 PMID: 7866026
  10. Maize myosins: diversity, localization, and function.
    Cell Motil Cytoskeleton. 2001 Feb;48(2):130-48 PMID: 11169765
  11. Organelle Movements along Actin Filaments and Microtubules.
    Plant Physiol. 1986 Nov;82(3):631-4 PMID: 16665084
  12. A novel calcium/calmodulin-regulated kinesin-like protein is highly conserved between monocots and dicots.
    DNA Cell Biol. 2000 Sep;19(9):567-78 PMID: 11034549
  13. Identification of a gene family (kat) encoding kinesin-like proteins in Arabidopsis thaliana and the characterization of secondary structure of KatA.
    Mol Gen Genet. 1993 Apr;238(3):362-8 PMID: 8492804
  14. A myosin family reunion.
    J Muscle Res Cell Motil. 1996 Feb;17(1):7-22 PMID: 8740428
  15. A myosin family tree.
    J Cell Sci. 2000 Oct;113 Pt 19:3353-4 PMID: 10984423
  16. Inhibitory regulation of higher-plant myosin by Ca2+ ions
    Plant Physiol. 1999 Jan;119(1):231-40 PMID: 9880365
  17. Motor proteins of cytoplasmic microtubules.
    Annu Rev Biochem. 1990;59:909-32 PMID: 2142876
  18. Identification of a phragmoplast-associated kinesin-related protein in higher plants.
    Curr Biol. 2000 Jun 29;10(13):797-800 PMID: 10898978
  19. TKRP125, a kinesin-related protein involved in the centrosome-independent organization of the cytokinetic apparatus in tobacco BY-2 cells.
    J Cell Sci. 1997 Jan;110 ( Pt 2):179-89 PMID: 9044048
  20. Myosin is involved in postmitotic cell spreading.
    J Cell Biol. 1995 Oct;131(1):179-89 PMID: 7559774
  21. Regulation of class I and class II myosins by heavy chain phosphorylation.
    J Biol Chem. 1996 Jul 19;271(29):16983-6 PMID: 8707782
  22. The SV40 small t intron is accurately and efficiently spliced in tobacco cells.
    Plant Mol Biol. 1991 Mar;16(3):375-9 PMID: 1654158
  23. SMART, a simple modular architecture research tool: identification of signaling domains.
    Proc Natl Acad Sci U S A. 1998 May 26;95(11):5857-64 PMID: 9600884
  24. Conservation within the myosin motor domain: implications for structure and function.
    Structure. 1996 Aug 15;4(8):969-87 PMID: 8805581
  25. The road less traveled: emerging principles of kinesin motor utilization.
    Annu Rev Cell Dev Biol. 1999;15:141-83 PMID: 10611960
  26. Molecular evolution of the myosin family: relationships derived from comparisons of amino acid sequences.
    Proc Natl Acad Sci U S A. 1993 Jan 15;90(2):659-63 PMID: 8421702
  27. Arabidopsis consensus intron sequences.
    Plant Mol Biol. 1996 Nov;32(3):531-5 PMID: 8980502
  28. Coevolution of head, neck, and tail domains of myosin heavy chains.
    Proc Natl Acad Sci U S A. 2000 Nov 7;97(23):12559-64 PMID: 11058170
  29. Organized F-actin is essential for normal trichome morphogenesis in Arabidopsis.
    Plant Cell. 1999 Dec;11(12):2331-47 PMID: 10590162
  30. Unconventional myosins.
    Curr Opin Cell Biol. 1992 Feb;4(1):27-35 PMID: 1558751
  31. Biochemical and immunocytochemical characterization of two types of myosins in cultured tobacco bright yellow-2 cells
    Plant Physiol. 1999 Oct;121(2):525-34 PMID: 10517844
  32. Characterization of the unconventional myosin VIII in plant cells and its localization at the post-cytokinetic cell wall.
    Plant J. 1999 Sep;19(5):555-67 PMID: 10504577
  33. Molecular analysis of the myosin gene family in Arabidopsis thaliana.
    Plant Mol Biol. 1994 Nov;26(4):1139-53 PMID: 7811972
  34. Localization of a myosin-like protein to plasmodesmata.
    Plant J. 1998 Jun;14(6):743-50 PMID: 9681037
  35. Cloning and characterization of a myosin from characean alga, the fastest motor protein in the world.
    J Biochem. 2000 Jun;127(6):1065-70 PMID: 10833276
  36. A myosin-like protein from a higher plant.
    J Mol Biol. 1993 May 5;231(1):148-54 PMID: 7684453
  37. Flying through the drosophila cytoskeletal genome.
    J Cell Biol. 2000 Jul 24;150(2):F63-8 PMID: 10908588
  38. Myosin from alga Chara: unique structure revealed by electron microscopy.
    J Mol Biol. 1995 Nov 24;254(2):109-12 PMID: 7490735
  39. The role of the cytoskeleton and a molecular motor in trichome morphogenesis.
    Trends Plant Sci. 2000 Dec;5(12):503-5 PMID: 11120459
  40. Comparative genomics of the eukaryotes.
    Science. 2000 Mar 24;287(5461):2204-15 PMID: 10731134
  41. The actin cytoskeleton is required to elaborate and maintain spatial patterning during trichome cell morphogenesis in Arabidopsis thaliana.
    Development. 1999 Dec;126(24):5559-68 PMID: 10572033
  42. Sequence motifs for calmodulin recognition.
    FASEB J. 1997 Apr;11(5):331-40 PMID: 9141499
  43. How many is enough? Exploring the myosin repertoire in the model eukaryote Dictyostelium discoideum.
    Cell Biochem Biophys. 1999;30(3):389-411 PMID: 10403058
  44. Molecular motors and their functions in plants.
    Int Rev Cytol. 2001;204:97-178 PMID: 11243598
  45. A kinesin-like protein, KatAp, in the cells of arabidopsis and other plants.
    Plant Cell. 1996 Jan;8(1):119-132 PMID: 8597656
  46. A novel plant calmodulin-binding protein with a kinesin heavy chain motor domain.
    J Biol Chem. 1996 Mar 22;271(12):7052-60 PMID: 8636137
  47. Actin and Myosin in pea tendrils.
    Plant Physiol. 1989 Feb;89(2):586-9 PMID: 16666586
  48. A plant kinesin heavy chain-like protein is a calmodulin-binding protein.
    Plant J. 1996 Jul;10(1):9-21 PMID: 8758976
  49. A myosin from a higher plant has structural similarities to class V myosins.
    J Mol Biol. 1994 Jun 17;239(4):591-7 PMID: 8006972
  50. Analysis of the genome sequence of the flowering plant Arabidopsis thaliana.
    Nature. 2000 Dec 14;408(6814):796-815 PMID: 11130711
  51. PCR-dependent amplification and sequence characterization of partial cDNAs encoding myosin-like proteins in Anemia phyllitidis (L.) Sw. and Arabidopsis thaliana (L.) Heynh.
    Plant Mol Biol. 1993 Mar;21(6):1077-83 PMID: 8490128
  52. Myosins: a diverse superfamily.
    Biochim Biophys Acta. 2000 Mar 17;1496(1):3-22 PMID: 10722873
  53. Immunochemical and immunocytochemical identification of a myosin heavy chain polypeptide in Nicotiana pollen tubes.
    J Cell Sci. 1989 Apr;92 ( Pt 4):569-74 PMID: 2689460
  54. Characterization of the human and mouse unconventional myosin XV genes responsible for hereditary deafness DFNB3 and shaker 2.
    Genomics. 1999 Nov 1;61(3):243-58 PMID: 10552926
  55. Actin cytoskeleton in plants: from transport networks to signaling networks.
    Microsc Res Tech. 1999 Oct 15;47(2):135-54 PMID: 10523792
  56. Functional diversity between orthologous myosins with minimal sequence diversity.
    J Muscle Res Cell Motil. 2000 May;21(4):375-82 PMID: 11032348
  57. In vitro motility of AtKCBP, a calmodulin-binding kinesin protein of Arabidopsis.
    Proc Natl Acad Sci U S A. 1997 Jan 7;94(1):322-7 PMID: 8990207
  58. High molecular weight polypeptides related to dynein heavy chains in Nicotiana tabacum pollen tubes.
    J Cell Sci. 1995 Mar;108 ( Pt 3):1117-25 PMID: 7622598
Article Info
Journal
Genome biology
Abbr.
Genome Biol
ISSN
1474-760X
Published
2001-00-00
Epub
2001-00-03
Pages
RESEARCH0024
Language
English
Region
England
NLM ID
100960660
PMCID
PMC55321
Subset
IM
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